Ron Henkel

According to our database, Ron Henkel authored at least 27 papers between 2009 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

TAPP: Defining standard provenance information for clinical research data and workflows - Obstacles and opportunities.

Kerstin Gierend, Judith A. H. Wodke, Sascha Genehr, Robert Gött, Ron Henkel, Frank Krüger, Markus Mandalka, Lea Michaelis, Alexander Scheuerlein, Max Schröder, Atinkut Zeleke, Dagmar Waltemath

Proceedings of the Companion Proceedings of the ACM Web Conference 2023, 2023

MeDaX project plan: How to sustainably improve biomedical (research) data management.

Judith A. H. Wodke, Ron Henkel, Dagmar Waltemath

Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023

Contributions to the reuse and reproducibility of computational biology models.

Ron Henkel, Dagmar Waltemath

Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023

The MeDaX Knowledge Graph Prototype.

Judith A. H. Wodke, Lea Michaelis, Ron Henkel

Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

Exploring New Possibilities for Research Data Exploration Using the Example of the German Core Data Set.

Felix Menzel, Dagmar Waltemath, Ron Henkel

Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

Exploring Use Cases for CovidGraph.

Lea Gütebier, Ron Henkel, Christian Niklas, Dagmar Waltemath

Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

2022

CovidGraph: a graph to fight COVID-19.

Lea Gütebier, Tim Bleimehl, Ron Henkel, Jamie Munro, Sebastian Müller, Axel Morgner, Jakob Laenge, Anke Pachauer, Alexander Erdl, Jens Weimar, Kirsten Walther Langendorf, Vincent Vialard, Thorsten Liebig, Martin Preusse, Dagmar Waltemath, Alexander Jarasch

Bioinform., October, 2022

Contributions to the reuse and reproducibility of computational biology models

Ron Henkel

PhD thesis, 2022

CovidGraph: Integrating COVID-19 Data.

Ron Henkel, Lea Gütebier, Dagmar Waltemath

Proceedings of the Challenges of Trustable AI and Added-Value on Health, 2022

2021

COVIDGraph: Connecting Biomedical COVID-19 Resources and Computational Biology Models.

Martin Preusse, Alexander Jarasch, Tim Bleimehl, Sebastian Muller, Jamie Munro, Lea Gütebier, Ron Henkel, Dagmar Waltemath

Proceedings of the 2nd Workshop on Search, 2021

2018

Identifying frequent patterns in biochemical reaction networks: a workflow.

Fabienne Lambusch, Dagmar Waltemath, Olaf Wolkenhauer, Kurt Sandkuhl, Christian Rosenke, Ron Henkel

Database J. Biol. Databases Curation, 2018

Notions of similarity for systems biology models.

Ron Henkel, Robert Hoehndorf, Tim Kacprowski, Christian Knüpfer, Wolfram Liebermeister, Dagmar Waltemath

Briefings Bioinform., 2018

2016

Finding patterns in biochemical reaction networks.

Ron Henkel, Fabienne Lambusch, Olaf Wolkenhauer, Kurt Sandkuhl, Christian Rosenke, Dagmar Waltemath

PeerJ Prepr., 2016

STON: exploring biological pathways using the SBGN standard and graph databases.

Vasundra Touré, Alexander Mazein, Dagmar Waltemath, Irina Balaur, Mansoor A. S. Saqi, Ron Henkel, Johann Pellet, Charles Auffray

BMC Bioinform., 2016

2015

Finding pattern in biochemical reaction networks - a sub-graph mining approach.

Ron Henkel, Fabienne Lambusch, Dagmar Waltemath

PeerJ Prepr., 2015

Annotation-based feature extraction from sets of SBML models.

Rebekka Alm, Dagmar Waltemath, Markus Wolfien, Olaf Wolkenhauer, Ron Henkel

J. Biomed. Semant., 2015

Combining computational models, semantic annotations and simulation experiments in a graph database.

Ron Henkel, Olaf Wolkenhauer, Dagmar Waltemath

Database J. Biol. Databases Curation, 2015

Supporting situation awareness of dementia patients in outdoor environments.

Philipp Koldrack, Ron Henkel, Frank Krüger, Stefan J. Teipel, Thomas Kirste

Proceedings of the 9th International Conference on Pervasive Computing Technologies for Healthcare, 2015

2014

MaSyMoS: Finding Hidden Treasures in Model Repositories.

Ron Henkel, Dagmar Waltemath

Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2014

Annotation-Based Feature Extraction from Sets of SBML Models.

Rebekka Alm, Dagmar Waltemath, Olaf Wolkenhauer, Ron Henkel

Proceedings of the Data Integration in the Life Sciences - 10th International Conference, 2014

Information Retrieval in Life Sciences: A Programmatic Survey.

Matthias Lange, Ron Henkel, Wolfgang Müller, Dagmar Waltemath, Stephan Weise

Proceedings of the Approaches in Integrative Bioinformatics - Towards the Virtual Cell, 2014

2013

Improving the reuse of computational models through version control.

Dagmar Waltemath, Ron Henkel, Robert Hälke, Martin Scharm, Olaf Wolkenhauer

Bioinform., 2013

2012

Considerations of graph-based concepts to manage of computational biology models and associated simulations.

Ron Henkel, Nicolas Le Novère, Olaf Wolkenhauer, Dagmar Waltemath

Proceedings of the 57. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie, 42. Jahrestagung der Gesellschaft für Informatik, Was bewegt uns in der/die Zukunft?, 2012

2011

Das Sombi-Framework zum Ermitteln geeigneter Suchfunktionen für biologische Modelldatenbasen.

Dagmar Waltemath, Ron Henkel, Holger Meyer, Andreas Heuer

Datenbank-Spektrum, 2011

2010

Ranked retrieval of Computational Biology models.

Ron Henkel, Lukas Endler, André Peters, Nicolas Le Novère, Dagmar Waltemath

BMC Bioinform., 2010

Distributed Information Retrieval of Computational Biological Models.

Ron Henkel

Proceedings of the Joint Workshop of the German Research Training Groups in Computer Science, 2010

2009

Towards Enhanced Retrieval of Biological Models through Annotation-Based Ranking.

Dagmar Köhn, Carsten Maus, Ron Henkel, Martin Kolbe

Proceedings of the Data Integration in the Life Sciences, 6th International Workshop, 2009