Sabino Liuni

According to our database, Sabino Liuni authored at least 45 papers between 1990 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

InteractomeSeq: a web server for the identification and profiling of domains and epitopes from phage display and next generation sequencing data.

Simone Puccio, Giorgio Grillo, Arianna Consiglio, Maria Felicia Soluri, Daniele Sblattero, Diego Cotella, Claudio Santoro, Sabino Liuni, Gianluca De Bellis, Enrico Lugli, Clelia Peano, Flavio Licciulli

Nucleic Acids Res., 2020

2018

ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences.

Monica Santamaria, Bruno Fosso, Flavio Licciulli, Bachir Balech, Ilaria Larini, Giorgio Grillo, Giorgio De Caro, Sabino Liuni, Graziano Pesole

Nucleic Acids Res., 2018

Arena-Idb: a platform to build human non-coding RNA interaction networks.

Vincenzo Bonnici, Giorgio De Caro, Giorgio Constantino, Sabino Liuni, Domenica D'Elia, Nicola Bombieri, Flavio Licciulli, Rosalba Giugno

BMC Bioinform., 2018

2017

WoPPER: Web server for Position Related data analysis of gene Expression in Prokaryotes.

Simone Puccio, Giorgio Grillo, Flavio Licciulli, Marco Severgnini, Sabino Liuni, Silvio Bicciato, Gianluca De Bellis, Francesco Ferrari, Clelia Peano

Nucleic Acids Res., 2017

2016

A fuzzy method for RNA-Seq differential expression analysis in presence of multireads.

Arianna Consiglio, Corrado Mencar, Giorgio Grillo, Flaviana Marzano, Mariano Francesco Caratozzolo, Sabino Liuni

BMC Bioinform., 2016

2015

Managing NGS Differential Expression Uncertainty with Fuzzy Sets.

Arianna Consiglio, Corrado Mencar, Giorgio Grillo, Sabino Liuni

Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2015

2012

BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments.

Arianna Consiglio, Massimo Carella, Giorgio De Caro, Gianfranco Delle Foglie, Candida Giovannelli, Giorgio Grillo, Massimo Ianigro, Flavio Licciulli, Orazio Palumbo, Ada Piepoli, Elena Ranieri, Sabino Liuni

BMC Bioinform., 2012

Reference databases for taxonomic assignment in metagenomics.

Monica Santamaria, Bruno Fosso, Arianna Consiglio, Giorgio De Caro, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marinella Marzano, Daniel Alonso-Alemany, Gabriel Valiente, Graziano Pesole

Briefings Bioinform., 2012

2010

UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs.

Giorgio Grillo, Antonio Turi, Flavio Licciulli, Flavio Mignone, Sabino Liuni, Sandro Banfi, Vincenzo Alessandro Gennarino, David Stephen Horner, Giulio Pavesi, Ernesto Picardi, Graziano Pesole

Nucleic Acids Res., 2010

Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing.

David Stephen Horner, Giulio Pavesi, Tiziana Castrignanò, Paolo D'Onorio De Meo, Sabino Liuni, Michael Sammeth, Ernesto Picardi, Graziano Pesole

Briefings Bioinform., 2010

2008

HT-RLS: High-Throughput Web Tool for Analysis of DNA Microarray Data Using RLS classifiers.

Paolo D'Onorio De Meo, Danilo Carrabino, Mattia D'Antonio, Annarita D'Addabbo, Sabino Liuni, Flavio Mignone, Graziano Pesole, Nicola Ancona

Proceedings of the 8th IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2008), 2008

2007

A high performance grid-web service framework for the identification of 'conserved sequence tags'.

Paolo D'Onorio De Meo, Danilo Carrabino, Nico Sanna, Tiziana Castrignanò, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Matteo Re, Flavio Mignone, Graziano Pesole

Future Gener. Comput. Syst., 2007

p53FamTaG: a database resource of human p53, p63 and p73 direct target genes combining <i>in silico </i>prediction and microarray data.

Elisabetta Sbisà, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Antonio Turi, Sabino Liuni, Graziano Pesole, Anna De Grassi, Mariano Francesco Caratozzolo, Anna Maria D'Erchia, Beatriz Navarro, Apollonia Tullo, Cecilia Saccone, Andreas Gisel

BMC Bioinform., 2007

Statistical assessment of functional categories of genes deregulated in pathological conditions by using microarray data.

Rosalia Maglietta, Ada Piepoli, Domenico Catalano, Piepoli Licciulli, Massimo Carella, Sabino Liuni, Graziano Pesole, Francesco Perri, Nicola Ancona

Bioinform., 2007

Selection of relevant genes in cancer diagnosis based on their prediction accuracy.

Rosalia Maglietta, Annarita D'Addabbo, Ada Piepoli, Francesco Perri, Sabino Liuni, Graziano Pesole, Nicola Ancona

Artif. Intell. Medicine, 2007

2006

On the statistical assessment of classifiers using DNA microarray data.

Nicola Ancona, Rosalia Maglietta, Ada Piepoli, Annarita D'Addabbo, R. Cotugno, M. Savino, Sabino Liuni, Massimo Carella, Graziano Pesole, Francesco Perri

BMC Bioinform., 2006

GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags.

Tiziana Castrignanò, Paolo D'Onorio De Meo, Giorgio Grillo, Sabino Liuni, Flavio Mignone, Ivano Giuseppe Talamo, Graziano Pesole

Bioinform., 2006

Classification error as a measure of gene relevance in cancer diagnosis.

Rosalia Maglietta, Annarita D'Addabbo, Ada Piepoli, Francesco Perri, Sabino Liuni, Graziano Pesole, Nicola Ancona

Proceedings of the International Joint Conference on Neural Networks, 2006

2005

UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs.

Flavio Mignone, Giorgio Grillo, Flavio Licciulli, Michele Iacono, Sabino Liuni, Paul J. Kersey, Jorge Duarte, Cecilia Saccone, Graziano Pesole

Nucleic Acids Res., 2005

Regularized Least Squares Cancer Classifiers from DNA microarray data.

Nicola Ancona, Rosalia Maglietta, Annarita D'Addabbo, Sabino Liuni, Graziano Pesole

BMC Bioinform., 2005

SVM and RLS Models for Cancer Classification.

Nicola Ancona, Annarita D'Addabbo, Sabino Liuni, Graziano Pesole, Rosalia Maglietta

Proceedings of the IASTED International Conference on Computational Intelligence, 2005

2004

CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison.

Tiziana Castrignanò, Alessandro Canali, Giorgio Grillo, Sabino Liuni, Flavio Mignone, Graziano Pesole

Nucleic Acids Res., 2004

DNAfan: a software tool for automated extraction and analysis of user-defined sequence regions.

Andreas Gisel, Maria Panetta, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Cecilia Saccone, Graziano Pesole

Bioinform., 2004

2003

PLMItRNA, a database on the heterogeneous genetic origin of mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes.

Guglielmo Rainaldi, Mariateresa Volpicella, Flavio Licciulli, Sabino Liuni, Raffaele Gallerani, Luigi R. Ceci

Nucleic Acids Res., 2003

PatSearch: a program for the detection of patterns and structural motifs in nucleotide sequences.

Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Graziano Pesole

Nucleic Acids Res., 2003

2002

UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002.

Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Flavio Mignone, Carmela Gissi, Cecilia Saccone

Nucleic Acids Res., 2002

PLANT-PIs: a database for plant protease inhibitors and their genes.

Francesca De Leo, Mariateresa Volpicella, Flavio Licciulli, Sabino Liuni, Raffaele Gallerani, Luigi R. Ceci

Nucleic Acids Res., 2002

MitoNuc: a database of nuclear genes coding for mitochondrial proteins. Update 2002.

Marcella Attimonelli, Domenico Catalano, Carmela Gissi, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Monica Santamaria, Graziano Pesole, Cecilia Saccone

Nucleic Acids Res., 2002

2001

PLMItRNA, a database for mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes.

Fabrizio Damiano, Raffaele Gallerani, Sabino Liuni, Flavio Licciulli, Luigi R. Ceci

Nucleic Acids Res., 2001

2000

PLMItRNA, a database for tRNAs and tRNA genes in plant mitochondria: enlargement and updating.

Vito Volpetti, Raffaele Gallerani, Caterina De Benedetto, Sabino Liuni, Flavio Licciulli, Luigi R. Ceci

Nucleic Acids Res., 2000

UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs.

Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Alessandra Larizza, Wojciech Makalowski, Cecilia Saccone

Nucleic Acids Res., 2000

MitoNuc and MitoAln: two related databases of nuclear genes coding for mitochondrial proteins.

Graziano Pesole, Carmela Gissi, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marcella Attimonelli, Cecilia Saccone

Nucleic Acids Res., 2000

Update of AMmtDB: a database of multi-aligned Metazoa mitochondrial DNA sequences.

Cecilia Lanave, Sabino Liuni, Flavio Licciulli, Marcella Attimonelli

Nucleic Acids Res., 2000

PatSearch: a pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance.

Graziano Pesole, Sabino Liuni, Mark D'Souza

Bioinform., 2000

The Untranslated Regions of Eukaryotic MRNAs: Structure, Function, Evolution and Bioinformatic Tools for Their Analysis.

Graziano Pesole, Giorgio Grillo, Alessandra Larizza, Sabino Liuni

Briefings Bioinform., 2000

1999

UTRdb: a specialized database of 5' and 3' untranslated regions of eukaryotic mRNAs.

Graziano Pesole, Sabino Liuni, Giorgio Grillo, Matilde Ippedico, Alessandra Larizza, Wojciech Makalowski, Cecilia Saccone

Nucleic Acids Res., 1999

Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences.

Cecilia Lanave, Marcella Attimonelli, Mariateresa De Robertis, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Cecilia Saccone

Nucleic Acids Res., 1999

PLMItRNA, a database for higher plant mitochondrial tRNAs and tRNA genes.

Luigi R. Ceci, Mariateresa Volpicella, Sabino Liuni, Vito Volpetti, Flavio Licciulli, Raffaele Gallerani

Nucleic Acids Res., 1999

1998

UTRdb: a specialized database of 5'- and 3'-untranslated regions of eukaryotic mRNAs.

Graziano Pesole, Sabino Liuni, Giorgio Grillo, Cecilia Saccone

Nucleic Acids Res., 1998

1996

Databases of MRNA Untranslated Regions for Metazoa.

Graziano Pesole, Giorgio Grillo, Sabino Liuni

Comput. Chem., 1996

CLEANUP: a fast computer program for removing redundancies from nucleotide sequence databases.

Giorgio Grillo, Marcella Attimonelli, Sabino Liuni, Graziano Pesole

Comput. Appl. Biosci., 1996

1993

FASTPAT: a fast and efficient algorithm for string searching in DNA sequences.

N. Prunella, Sabino Liuni, Marcella Attimonelli, Graziano Pesole

Comput. Appl. Biosci., 1993

SIMD parallelization of the WORDUP algorithm for detecting statistically significant patterns in DNA sequences.

Sabino Liuni, N. Prunella, Graziano Pesole, Tiziana D'Orazio, Ettore Stella, Arcangelo Distante

Comput. Appl. Biosci., 1993

1992

A simple method for global sequence comparison.

Elisabetta Pizzi, Marcella Attimonelli, Sabino Liuni, Clara Frontali, Cecilia Saccone

Nucleic Acids Res., 1992

1990

Detection of latent sequence periodicities.

Elisabetta Pizzi, Sabino Liuni, Clara Frontali

Nucleic Acids Res., 1990