Marcel J. T. Reinders
Orcid: 0000-0002-1148-1562Affiliations:
- Delft University of Technology, Netherlands
According to our database1,
Marcel J. T. Reinders
authored at least 161 papers
between 1992 and 2024.
Collaborative distances:
Collaborative distances:
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Bibliography
2024
Learning solutions of parametric Navier-Stokes with physics-informed neural networks.
CoRR, 2024
2023
Bioinform., November, 2023
An in-depth comparison of linear and non-linear joint embedding methods for bulk and single-cell multi-omics.
Briefings Bioinform., November, 2023
Causal inference using observational intensive care unit data: a scoping review and recommendations for future practice.
npj Digit. Medicine, 2023
CoRR, 2023
Personalized Anomaly Detection in PPG Data using Representation Learning and Biometric Identification.
CoRR, 2023
Bioinform., 2023
Percolate: An Exponential Family JIVE Model to Design DNA-Based Predictors of Drug Response.
Proceedings of the Research in Computational Molecular Biology, 2023
Proceedings of the 8th International Conference on Machine Learning Technologies, 2023
2022
A framework for employing longitudinally collected multicenter electronic health records to stratify heterogeneous patient populations on disease history.
J. Am. Medical Informatics Assoc., 2022
MiMIR: R-shiny application to infer risk factors and endpoints from Nightingale Health's 1H-NMR metabolomics data.
Bioinform., 2022
2021
snpXplorer: a web application to explore human SNP-associations and annotate SNP-sets.
Nucleic Acids Res., 2021
Unsupervised protein embeddings outperform hand-crafted sequence and structure features at predicting molecular function.
Bioinform., 2021
2020
ImSpectR: R package to quantify immune repertoire diversity in spectratype and repertoire sequencing data.
Bioinform., 2020
PREDICT: Efficient Private Disease Susceptibility Testing in Direct-to-Consumer Model.
Proceedings of the CODASPY '20: Tenth ACM Conference on Data and Application Security and Privacy, 2020
2019
PRECISE: a domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors.
Bioinform., 2019
Improving protein function prediction using protein sequence and GO-term similarities.
Bioinform., 2019
2018
Brain Informatics, 2018
Briefings Bioinform., 2018
2017
Continuous infusion of manganese improves contrast and reduces side effects in manganese-enhanced magnetic resonance imaging studies.
NeuroImage, 2017
2016
2015
Unbiased Quantitative Models of Protein Translation Derived from Ribosome Profiling Data.
PLoS Comput. Biol., 2015
PLoS Comput. Biol., 2015
An integrated approach of gene expression and DNA-methylation profiles of WNT signaling genes uncovers novel prognostic markers in Acute Myeloid Leukemia.
BMC Bioinform., 2015
Integration of gene expression and DNA-methylation profiles improves molecular subtype classification in acute myeloid leukemia.
BMC Bioinform., 2015
Proteny: discovering and visualizing statistically significant syntenic clusters at the proteome level.
Bioinform., 2015
2014
BMC Bioinform., 2014
Genomic connectivity networks based on the BrainSpan atlas of the developing human brain.
Proceedings of the Medical Imaging 2014: Image Processing, 2014
The Effect of Aggregating Subtype Performances Depends Strongly on the Performance Measure Used.
Proceedings of the 22nd International Conference on Pattern Recognition, 2014
2013
Efficient calculation of compound similarity based on maximum common subgraphs and its application to prediction of gene transcript levels.
Int. J. Bioinform. Res. Appl., 2013
Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion.
BMC Bioinform., 2013
Exploring variation-aware contig graphs for (comparative) metagenomics using MaryGold.
Bioinform., 2013
Proceedings of the Pattern Recognition in Bioinformatics, 2013
Proceedings of the Pattern Recognition in Bioinformatics, 2013
Proceedings of the Pattern Recognition in Bioinformatics, 2013
Proceedings of the Pattern Recognition in Bioinformatics, 2013
Ibidas: Querying Flexible Data Structures to Explore Heterogeneous Bioinformatics Data.
Proceedings of the Data Integration in the Life Sciences - 9th International Conference, 2013
2012
Bioinform., 2012
Enabling large genomic data transfers using nation-wide and international dynamic lightpaths.
Proceedings of the 8th IEEE International Conference on E-Science, 2012
2011
IEEE ACM Trans. Comput. Biol. Bioinform., 2011
ACM Trans. Appl. Percept., 2011
Nano Commun. Networks, 2011
Integrating Protein-Protein Interaction Networks with Gene-Gene Co-Expression Networks improves Gene Signatures for Classifying Breast Cancer Metastasis.
J. Integr. Bioinform., 2011
CytoscapeRPC: a plugin to create, modify and query Cytoscape networks from scripting languages.
Bioinform., 2011
Integrating Protein Family Sequence Similarities with Gene Expression to Find Signature Gene Networks in Breast Cancer Metastasis.
Proceedings of the Pattern Recognition in Bioinformatics, 2011
2010
ACM Trans. Inf. Syst., 2010
Identification of Networks of Co-Occurring, Tumor-Related DNA Copy Number Changes Using a Genome-Wide Scoring Approach.
PLoS Comput. Biol., 2010
Inf. Process. Manag., 2010
HAT: Hypergeometric Analysis of Tiling-arrays with application to promoter-GeneChip data.
BMC Bioinform., 2010
Delineation of amplification, hybridization and location effects in microarray data yields better-quality normalization.
BMC Bioinform., 2010
Inferring combinatorial association logic networks in multimodal genome-wide screens.
Bioinform., 2010
Proceedings of the Proceeding of the 33rd International ACM SIGIR Conference on Research and Development in Information Retrieval, 2010
Proceedings of the Pattern Recognition in Bioinformatics, 2010
Proceedings of the 2010 IEEE International Workshop on Genomic Signal Processing and Statistics, 2010
Proceedings of the Advances in Information Retrieval, 2010
2009
Evolutionary Optimization of Kernel Weights Improves Protein Complex Comembership Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2009
EURASIP J. Bioinform. Syst. Biol., 2009
A comprehensive sensitivity analysis of microarray breast cancer classification under feature variability.
BMC Bioinform., 2009
Exploiting Positive and Negative Graded Relevance Assessments for Content Recommendation.
Proceedings of the Algorithms and Models for the Web-Graph, 6th International Workshop, 2009
2D/3D Registration of Micro-CT Data to Multi-View Photographs Based on a 3D Distance Map.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009
Proceedings of the Human Vision and Electronic Imaging XIV, 2009
Proceedings of the Gesture in Embodied Communication and Human-Computer Interaction, 2009
A sensitivity analysis of microarray feature selection and classification under measurement noise.
Proceedings of the 2009 IEEE International Workshop on Genomic Signal Processing and Statistics, 2009
Proceedings of the Handbook of Multimedia for Digital Entertainment and Arts, 2009
2008
ACM Trans. Inf. Syst., 2008
Erratum to "Classification in the presence of class noise using a probabilistic kernel fisher method": [Pattern Recognition 40 (12) 3349-3357].
Pattern Recognit., 2008
Integration of prior knowledge of measurement noise in kernel density classification.
Pattern Recognit., 2008
Sign Language Recognition by Combining Statistical DTW and Independent Classification.
IEEE Trans. Pattern Anal. Mach. Intell., 2008
Int. J. Bioinform. Res. Appl., 2008
Metabolic pathway alignment between species using a comprehensive and flexible similarity measure.
BMC Syst. Biol., 2008
Comparison of normalisation methods for surface-enhanced laser desorption and ionisation (SELDI) time-of-flight (TOF) mass spectrometry data.
BMC Bioinform., 2008
Proceedings of the 31st Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2008
Combinatorial influence of environmental parameters on transcription factor activity.
Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008
Proceedings of the 8th IEEE International Conference on Automatic Face and Gesture Recognition (FG 2008), 2008
Proceedings of the 8th IEEE International Conference on Automatic Face and Gesture Recognition (FG 2008), 2008
Proceedings of the 3rd International ICST Conference on Bio-Inspired Models of Network, 2008
Metabolic Pathway Alignment (M-Pal) Reveals Diversity and Alternatives in Conserved Networks.
Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008
2007
Classification in the presence of class noise using a probabilistic Kernel Fisher method.
Pattern Recognit., 2007
J. Bioinform. Comput. Biol., 2007
Integration of Known Transcription Factor Binding Site Information and Gene Expression Data to Advance from Co-Expression to Co-Regulation.
Genom. Proteom. Bioinform., 2007
BMC Bioinform., 2007
A self-calibrating chrominance model applied to skin color detection.
Proceedings of the VISAPP 2007: Proceedings of the Second International Conference on Computer Vision Theory and Applications, Barcelona, Spain, March 8-11, 2007, 2007
Co-occurrence analysis of insertional mutagenesis data reveals cooperating oncogenes.
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007
Proceedings of the Gesture-Based Human-Computer Interaction and Simulation, 2007
Proceedings of the Fourth IEEE International Conference on Advanced Video and Signal Based Surveillance, 2007
2006
Pattern Recognit. Lett., 2006
Artifacts of Markov blanket filtering based on discretized features in small sample size applications.
Pattern Recognit. Lett., 2006
Detecting Statistically Significant Common Insertion Sites in Retroviral Insertional Mutagenesis Screens.
PLoS Comput. Biol., 2006
The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies.
BMC Bioinform., 2006
A comparison of univariate and multivariate gene selection techniques for classification of cancer datasets.
BMC Bioinform., 2006
Least absolute regression network analysis of the murine osteoblast differentiation network.
Bioinform., 2006
Unifying user-based and item-based collaborative filtering approaches by similarity fusion.
Proceedings of the SIGIR 2006: Proceedings of the 29th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2006
Proceedings of the 2006 ACM Symposium on Applied Computing (SAC), 2006
Proceedings of the Advances in Information Retrieval, 2006
Condition Transition Analysis Reveals TF Activity Related to Nutrient-Limitation-Specific Effects of Oxygen Presence in Yeast.
Proceedings of the Computational Methods in Systems Biology, International Conference, 2006
2005
The Nearest Subclass Classifier: A Compromise between the Nearest Mean and Nearest Neighbor Classifier.
IEEE Trans. Pattern Anal. Mach. Intell., 2005
A protocol for building and evaluating predictors of disease state based on microarray data.
Bioinform., 2005
Proceedings of the SIGIR 2005: Proceedings of the 28th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2005
Proceedings of the 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2005), 2005
Unravelling the murine osteoblast differentiation pathway by network structure analysis using time-series microarray data.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005
Which normalization method is best? A platform-independent biologically inspired quantitative comparison of normalization methods.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005
Relating transcription factors, modules of genes and cultivation conditions in Saccharomyces cerevisiae.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005
2004
Proceedings of the 17th International Conference on Pattern Recognition, 2004
Video content representation on tiny devices.
Proceedings of the 2004 IEEE International Conference on Multimedia and Expo, 2004
Influence of The Observation Likelihood Function on Particle Filtering Performance in Tracking Applications.
Proceedings of the Sixth IEEE International Conference on Automatic Face and Gesture Recognition (FGR 2004), 2004
2003
IEEE Trans. Image Process., 2003
Studying the Conditions for Learning Dynamic Bayesian Networks to Discover Genetic Regulatory Networks.
Simul., 2003
Artif. Intell., 2003
Proceedings of the 2003 ACM SIGMM Workshop on Experiential Telepresence, 2003
2002
Scale-invariant segmentation of dynamic contrast-enhanced perfusion MR images with inherent scale selection.
Comput. Animat. Virtual Worlds, 2002
Proceedings of the 2002 International Conference on Image Processing, 2002
Image sequence restoration in the presence of pathological motion and severe artifacts.
Proceedings of the IEEE International Conference on Acoustics, 2002
Proceedings of the 11th European Signal Processing Conference, 2002
2001
IEEE Trans. Pattern Anal. Mach. Intell., 2001
Proceedings of the Algorithms in Bioinformatics, First International Workshop, 2001
Proceedings of the 6th Pacific Symposium on Biocomputing, 2001
Proceedings of the 2001 International Conference on Image Processing, 2001
Dating and Authentication of Rembrandt's Etchings with the Help of Computational Intelligence.
Proceedings of the International Cultural Heritage Informatics Meeting: Proceedings from ICHIM 2001. Politechnico di Milano, Milan, Italy, September 3-7, 2001, 2001
Proceedings of the 10th IEEE International Conference on Fuzzy Systems, 2001
2000
Pattern Recognit. Lett., 2000
Proceedings of the Parallel Problem Solving from Nature, 2000
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology, 2000
Eye Activity Detection and Recognition Using Morphological Scale-Space Decomposition.
Proceedings of the 15th International Conference on Pattern Recognition, 2000
Proceedings of the 15th International Conference on Pattern Recognition, 2000
Proceedings of the 2000 International Conference on Image Processing, 2000
1999
Pattern Recognit. Lett., 1999
1998
A Fast and Robust Point Tracking Algorithm.
Proceedings of the 1998 IEEE International Conference on Image Processing, 1998
1997
Proceedings of the Graphics Recognition, 1997
1996
Proceedings of the 2nd International Conference on Automatic Face and Gesture Recognition (FG '96), 1996
1995
Facial feature localization and adaptation of a generic face model for model-based coding.
Signal Process. Image Commun., 1995
1993
Proceedings of the Visual Communications and Image Processing '93, 1993
1992
Proceedings of the 11th IAPR International Conference on Pattern Recognition, 1992