Weida Tong

According to our database1, Weida Tong authored at least 54 papers between 1995 and 2019.

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Bibliography

2019
Study of serious adverse drug reactions using FDA-approved drug labeling and MedDRA.
BMC Bioinformatics, 2019

Correction to: Similarities and differences between variants called with human reference genome HG19 or HG38.
BMC Bioinformatics, 2019

Similarities and differences between variants called with human reference genome HG19 or HG38.
BMC Bioinformatics, 2019

2017
Integrating Drug's Mode of Action into Quantitative Structure-Activity Relationships for Improved Prediction of Drug-Induced Liver Injury.
Journal of Chemical Information and Modeling, 2017

Scaling bioinformatics applications on HPC.
BMC Bioinformatics, 2017

Toward precision breast cancer survival prediction utilizing combined whole genome-wide expression and somatic mutation analysis.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Comprehensive analysis of pulmonary adenocarcinoma in situ (AIS) revealed new insights into lung cancer progression.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Protein-Protein Interaction Extraction Using Attention-Based Convolution Neural Networks.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016
Erratum to: A novel procedure on next generation sequencing data analysis using text mining algorithm.
BMC Bioinformatics, 2016

A novel procedure on next generation sequencing data analysis using text mining algorithm.
BMC Bioinformatics, 2016

Application of dynamic topic models to toxicogenomics data.
BMC Bioinformatics, 2016

An Image Analysis Environment for Species Identification of Food Contaminating Beetles.
Proceedings of the Thirtieth AAAI Conference on Artificial Intelligence, 2016

2014
Of text and gene - using text mining methods to uncover hidden knowledge in toxicogenomics.
BMC Systems Biology, 2014

Whole genome sequencing of 35 individuals provides insights into the genetic architecture of Korean population.
BMC Bioinformatics, 2014

Mining hidden knowledge for drug safety assessment: topic modeling of LiverTox as a case study.
BMC Bioinformatics, 2014

Identification of genes and pathways involved in kidney renal clear cell carcinoma.
BMC Bioinformatics, 2014

Advances in translational bioinformatics facilitate revealing the landscape of complex disease mechanisms.
BMC Bioinformatics, 2014

Competitive molecular docking approach for predicting estrogen receptor subtype α agonists and antagonists.
BMC Bioinformatics, 2014

A phenome-guided drug repositioning through a latent variable model.
BMC Bioinformatics, 2014

2013
Estimating relative noise to signal in DNA microarray data.
IJBRA, 2013

Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes.
BMC Bioinformatics, 2013

A systems approach for analysis of high content screening assay data with topic modeling.
BMC Bioinformatics, 2013

2012
Investigating drug repositioning opportunities in FDA drug labels through topic modeling.
BMC Bioinformatics, 2012

2011
Translating Clinical Findings into Knowledge in Drug Safety Evaluation - Drug Induced Liver Injury Prediction System (DILIps).
PLoS Computational Biology, 2011

Constructing a robust protein-protein interaction network by integrating multiple public databases.
BMC Bioinformatics, 2011

Selecting a single model or combining multiple models for microarray-based classifier development? - A comparative analysis based on large and diverse datasets generated from the MAQC-II project.
BMC Bioinformatics, 2011

Mining FDA drug labels using an unsupervised learning technique - topic modeling.
BMC Bioinformatics, 2011

The MicroArray Quality Control (MAQC) Project and Cross-Platform Analysis of Microarray Data.
Proceedings of the Handbook of Statistical Bioinformatics., 2011

2010
Two new ArrayTrack libraries for personalized biomedical research.
BMC Bioinformatics, 2010

Evaluation of gene expression data generated from expired Affymetrix GeneChip® microarrays using MAQC reference RNA samples.
BMC Bioinformatics, 2010

An FDA bioinformatics tool for microbial genomics research on molecular characterization of bacterial foodborne pathogens using microarrays.
BMC Bioinformatics, 2010

The EDKB: an established knowledge base for endocrine disrupting chemicals.
BMC Bioinformatics, 2010

ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level.
Bioinformatics, 2010

2009
The Accurate Prediction of Protein Family from Amino Acid Sequence by Measuring Features of Sequence Fragments.
Journal of Computational Biology, 2009

Accurate Prediction and Recognition of Subfamilies of G Protein-Coupled Receptors from Amino Acid Sequences.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2009

2008
Mold2, Molecular Descriptors from 2D Structures for Chemoinformatics and Toxicoinformatics.
Journal of Chemical Information and Modeling, 2008

Very Important Pool (VIP) genes - an application for microarray-based molecular signatures.
BMC Bioinformatics, 2008

Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.
BMC Bioinformatics, 2008

2007
Consensus analysis of multiple classifiers using non-repetitive variables: Diagnostic application to microarray gene expression data.
Computational Biology and Chemistry, 2007

2006
GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data.
BMC Bioinformatics, 2006

Microarray analysis distinguishes differential gene expression patterns from large and small colony Thymidine kinase mutants of L5178Y mouse lymphoma cells.
BMC Bioinformatics, 2006

Differential gene expression in mouse primary hepatocytes exposed to the peroxisome proliferator-activated receptor alpha agonists.
BMC Bioinformatics, 2006

Integrating time-course microarray gene expression profiles with cytotoxicity for identification of biomarkers in primary rat hepatocytes exposed to cadmium.
Bioinformatics, 2006

2005
Decision Forest Analysis of 61 Single Nucleotide Polymorphisms in a Case-Control Study of Esophageal Cancer; a novel method.
BMC Bioinformatics, 2005

Microarray scanner calibration curves: characteristics and implications.
BMC Bioinformatics, 2005

Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential.
BMC Bioinformatics, 2005

Quality control and quality assessment of data from surface-enhanced laser desorption/ionization (SELDI) time-of flight (TOF) mass spectrometry (MS).
BMC Bioinformatics, 2005

Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling.
BMC Bioinformatics, 2005

2004
Multi-class tumor classification by discriminant partial least squares using microarray gene expression data and assessment of classification models.
Computational Biology and Chemistry, 2004

2003
Decision Forest: Combining the Predictions of Multiple Independent Decision Tree Models.
Journal of Chemical Information and Computer Sciences, 2003

An Approach to Comparative Analysis of Chromatographic Fingerprints for Assuring the Quality of Botanical Drugs.
Journal of Chemical Information and Computer Sciences, 2003

2001
QSAR Models Using a Large Diverse Set of Estrogens.
Journal of Chemical Information and Computer Sciences, 2001

1998
Evaluation of Quantitative Structure-Activity Relationship Methods for Large-Scale Prediction of Chemicals Binding to the Estrogen Receptor.
Journal of Chemical Information and Computer Sciences, 1998

1995
The Role of the Carboxylate Ion in Models of Acyl-Chymotrypsin.
Journal of Computational Chemistry, 1995


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