Charles Ofria

According to our database1, Charles Ofria authored at least 74 papers between 1999 and 2018.

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Bibliography

2018
Toward open-ended fraternal transitions in individuality.
PeerJ PrePrints, 2018

What else is in an evolved name? Exploring evolvable specificity with SignalGP.
PeerJ PrePrints, 2018

Evolving reactive agents with SignalGP.
PeerJ PrePrints, 2018

The MODES toolbox: Measurements of Open-ended Dynamics in Evolving Systems.
PeerJ PrePrints, 2018

Exploring genetic programming systems with MAP-Elites.
PeerJ PrePrints, 2018

Quantifying the tape of life: Ancestry-based metrics provide insights and intuition about evolutionary dynamics.
PeerJ PrePrints, 2018

Ecological theory provides insights about evolutionary computation.
PeerJ PrePrints, 2018

Digital investigations on the evolution of prokaryote photosynthesis regulation: late-breaking abstract.
Proceedings of the Genetic and Evolutionary Computation Conference Companion, 2018

Learning an evolvable genotype-phenotype mapping.
Proceedings of the Genetic and Evolutionary Computation Conference, 2018

Evolving event-driven programs with SignalGP.
Proceedings of the Genetic and Evolutionary Computation Conference, 2018

Visualizing the tape of life: exploring evolutionary history with virtual reality.
Proceedings of the Genetic and Evolutionary Computation Conference Companion, 2018

Ecological theory provides insights about evolutionary computation.
Proceedings of the Genetic and Evolutionary Computation Conference Companion, 2018

2017
The genotype-phenotype map of an evolving digital organism.
PLoS Computational Biology, 2017

Threshold for cooperation on irregular spatial networks.
Proceedings of the Fourteenth European Conference Artificial Life, 2017

Investigations into the evolutionary origin of navigation and learning.
Proceedings of the Fourteenth European Conference Artificial Life, 2017

Improved adaptation in exogenously and endogenously changing environments.
Proceedings of the Fourteenth European Conference Artificial Life, 2017

Gene duplications drive the evolution of complex traits and regulation.
Proceedings of the Fourteenth European Conference Artificial Life, 2017

Spatial resource heterogeneity creates local hotspots of evolutionary potential.
Proceedings of the Fourteenth European Conference Artificial Life, 2017

Sexual selection promotes ecological speciation in digital organisms.
Proceedings of the Fourteenth European Conference Artificial Life, 2017

2016
Open-Ended Evolution: Perspectives from the OEE Workshop in York.
Artificial Life, 2016

WebAL Comes of Age: A Review of the First 21 Years of Artificial Life on the Web.
Artificial Life, 2016

What Factors Drive the Evolution of Mutualism?
Proceedings of the Genetic and Evolutionary Computation Conference, 2016

2015
Unraveling the genotype-phenotype map of evolving digital organisms.
Proceedings of the Thirteenth European Conference Artificial Life, 2015

2014
The evolution of kin inclusivity levels.
Proceedings of the Genetic and Evolutionary Computation Conference, 2014

There and back again: gene-processing hardware for the evolution and robotic deployment of robust navigation strategies.
Proceedings of the Genetic and Evolutionary Computation Conference, 2014

2013
Distributed Cooperative Caching in Social Wireless Networks.
IEEE Trans. Mob. Comput., 2013

Evolving Digital Ecological Networks.
PLoS Computational Biology, 2013

Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes.
Proceedings of the Genetic and Evolutionary Computation Conference, 2013

2012
Finger-painting Fitness Landscapes: An Interactive Tool for Exploring Complex Evolutionary Dynamics.
Proceedings of the Artificial Life 13: Proceedings of the Thirteenth International Conference on the Simulation and Synthesis of Living Systems, 2012

Evolutionary Potential is Maximized at Intermediate Diversity Levels.
Proceedings of the Artificial Life 13: Proceedings of the Thirteenth International Conference on the Simulation and Synthesis of Living Systems, 2012

The Evolution of Temporal Polyethism.
Proceedings of the Artificial Life 13: Proceedings of the Thirteenth International Conference on the Simulation and Synthesis of Living Systems, 2012

An ecology-based evolutionary algorithm to evolve solutions to complex problems.
Proceedings of the Artificial Life 13: Proceedings of the Thirteenth International Conference on the Simulation and Synthesis of Living Systems, 2012

Digital Evolution Exhibits Surprising Robustness to Poor Design Decisions.
Proceedings of the Artificial Life 13: Proceedings of the Thirteenth International Conference on the Simulation and Synthesis of Living Systems, 2012

2011
On the Performance of Indirect Encoding Across the Continuum of Regularity.
IEEE Trans. Evolutionary Computation, 2011

Rapid host-parasite coevolution drives the production and maintenance of diversity in digital organisms.
Proceedings of the 13th Annual Genetic and Evolutionary Computation Conference, 2011

Modeling the evolutionary dynamics of plasmids in spatial populations.
Proceedings of the 13th Annual Genetic and Evolutionary Computation Conference, 2011

Digital sex: Causes and consequences.
Proceedings of the Advances in Artificial Life: 20th Anniversary Edition, 2011

Clever creatures: Case studies of evolved digital organisms.
Proceedings of the Advances in Artificial Life: 20th Anniversary Edition, 2011

Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes.
Proceedings of the Advances in Artificial Life: 20th Anniversary Edition, 2011

Selective pressures for accurate altruism targeting: evidence from digital evolution for difficult-to-test aspects of inclusive fitness theory.
Proceedings of the Advances in Artificial Life: 20th Anniversary Edition, 2011

2010
Evolution of division of labor in genetically homogenous groups.
Proceedings of the Genetic and Evolutionary Computation Conference, 2010

Investigating whether hyperNEAT produces modular neural networks.
Proceedings of the Genetic and Evolutionary Computation Conference, 2010

Digital evolution with avida.
Proceedings of the Genetic and Evolutionary Computation Conference, 2010

Early Evolution of Memory Usage in Digital Organisms.
Proceedings of the Artificial Life XII: Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, 2010

Social Structure and the Maintenance of Biodiversity.
Proceedings of the Artificial Life XII: Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, 2010

2009
Ecological approaches to diversity maintenance in evolutionary algorithms.
Proceedings of the 2009 IEEE Symposium on Artificial Life, 2009

Cockroaches, drunkards, and climbers: Modeling the evolution of simple movement strategies using digital organisms.
Proceedings of the 2009 IEEE Symposium on Artificial Life, 2009

Applying digital evolution to the design of self-adaptive software.
Proceedings of the 2009 IEEE Symposium on Artificial Life, 2009

Problem decomposition using indirect reciprocity in evolved populations.
Proceedings of the Genetic and Evolutionary Computation Conference, 2009

The sensitivity of HyperNEAT to different geometric representations of a problem.
Proceedings of the Genetic and Evolutionary Computation Conference, 2009

The Evolution of Division of Labor.
Proceedings of the Advances in Artificial Life. Darwin Meets von Neumann, 2009

HybrID: A Hybridization of Indirect and Direct Encodings for Evolutionary Computation.
Proceedings of the Advances in Artificial Life. Darwin Meets von Neumann, 2009

Evolving coordinated quadruped gaits with the HyperNEAT generative encoding.
Proceedings of the IEEE Congress on Evolutionary Computation, 2009

2008
Natural Selection Fails to Optimize Mutation Rates for Long-Term Adaptation on Rugged Fitness Landscapes.
PLoS Computational Biology, 2008

Harnessing Digital Evolution.
IEEE Computer, 2008

On the Gradual Evolution of Complexity and the Sudden Emergence of Complex Features.
Artificial Life, 2008

How a Generative Encoding Fares as Problem-Regularity Decreases.
Proceedings of the Parallel Problem Solving from Nature, 2008

Digital Evolution of Behavioral Models for Autonomic Systems.
Proceedings of the 2008 International Conference on Autonomic Computing, 2008

Autonomic Software Development Methodology Based on Darwinian Evolution.
Proceedings of the 2008 International Conference on Autonomic Computing, 2008

Cooperative network construction using digital germlines.
Proceedings of the Genetic and Evolutionary Computation Conference, 2008

On the evolution of motility and intelligent tactic response.
Proceedings of the Genetic and Evolutionary Computation Conference, 2008

How generative encodings fare on less regular problems.
Proceedings of the Genetic and Evolutionary Computation Conference, 2008

Selection for group-level efficiency leads to self-regulation of population size.
Proceedings of the Genetic and Evolutionary Computation Conference, 2008

2007
Evolution of Cooperative Information Gathering in Self-Replicating Digital Organisms.
Proceedings of the First International Conference on Self-Adaptive and Self-Organizing Systems, 2007

Digitally Evolving Models for Dynamically Adaptive Systems.
Proceedings of the 2007 ICSE Workshop on Software Engineering for Adaptive and Self-Managing Systems, 2007

Using group selection to evolve leadership in populations of self-replicating digital organisms.
Proceedings of the Genetic and Evolutionary Computation Conference, 2007

Directed Evolution of Communication and Cooperation in Digital Organisms.
Proceedings of the Advances in Artificial Life, 9th European Conference, 2007

Investigating the Emergence of Phenotypic Plasticity in Evolving Digital Organisms.
Proceedings of the Advances in Artificial Life, 9th European Conference, 2007

Evolution of an Adaptive Sleep Response in Digital Organisms.
Proceedings of the Advances in Artificial Life, 9th European Conference, 2007

2004
Avida: A Software Platform for Research in Computational Evolutionary Biology.
Artificial Life, 2004

Using Avida to Test the Effects of Natural Selection on Phylogenetic Reconstruction Methods.
Artificial Life, 2004

2003
The Effect of Natural Selection on Phylogeny Reconstruction Algorithms.
Proceedings of the Genetic and Evolutionary Computation, 2003

2002
Design of evolvable computer languages.
IEEE Trans. Evolutionary Computation, 2002

1999
Evolution of Differentiated Expression Patterns in Digital Organisms.
Proceedings of the Advances in Artificial Life, 5th European Conference, 1999


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