David J. Studholme

According to our database, David J. Studholme authored at least 11 papers between 2003 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

DIAMOND2GO: rapid Gene Ontology assignment and enrichment detection for functional genomics.

Christopher Golden, David J. Studholme, Rhys A. Farrer

Frontiers Bioinform., 2025

2021

Data management challenges for artificial intelligence in plant and agricultural research.

Hugh F. Williamson, Julia Brettschneider, Mario Cáccamo, Robert P. Davey, Carole A. Goble, Paul J. Kersey, Sean T. May, Richard J. Morris, Richard Ostler, Tony P. Pridmore, Christopher J. Rawlings, David J. Studholme, Sotirios A. Tsaftaris, Sabina Leonelli

F1000Research, 2021

2010

Finding sRNA generative locales from high-throughput sequencing data with NiBLS.

Daniel MacLean, Vincent Moulton, David J. Studholme

BMC Bioinform., 2010

<i>De novo</i> assembly of short sequence reads.

Konrad H. Paszkiewicz, David J. Studholme

Briefings Bioinform., 2010

2008

A toolkit for analysing large-scale plant small RNA datasets.

Simon Moxon, Frank Schwach, Tamas Dalmay, Daniel MacLean, David J. Studholme, Vincent Moulton

Bioinform., 2008

Time Series Data Mining Algorithms for Identifying Short RNA in Arabidopsis thaliana.

Anthony J. Bagnall, Simon Moxon, David J. Studholme, Vincent Moulton

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

2007

Marker development for the genetic study of natural variation in <i>Arabidopsis thaliana</i>.

Adnane Nemri, Michael M. Neff, Michael Burrell, Jonathan D. G. Jones, David J. Studholme

Bioinform., 2007

2006

G8: a novel domain associated with polycystic kidney disease and non-syndromic hearing loss.

Quan-Yuan He, Xiang-Hua Liu, Qiang Li, David J. Studholme, Xuan-Wen Li, Song-Ping Liang

Bioinform., 2006

2005

InterPro, progress and status in 2005.

Nicola J. Mulder, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Paul Bradley, Peer Bork, Phillip Bucher, Lorenzo Cerutti, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin, Wolfgang Fleischmann, Julian Gough, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, David Lonsdale, Rodrigo Lopez, Ivica Letunic, Martin Madera, John Maslen, Jennifer McDowall, Alex L. Mitchell, Anastasia N. Nikolskaya, Sandra E. Orchard, Marco Pagni, Chris P. Ponting, Emmanuel Quevillon, Jeremy D. Selengut, Christian J. A. Sigrist, Ville Silventoinen, David J. Studholme, Robert Vaughan, Cathy H. Wu

Nucleic Acids Res., 2005

2004

The Pfam protein families database.

Alex Bateman, Lachlan James M. Coin, Richard Durbin, Robert D. Finn, Volker Hollich, Sam Griffiths-Jones, Ajay Khanna, Mhairi Marshall, Simon Moxon, Erik L. L. Sonnhammer, David J. Studholme, Corin Yeats, Sean R. Eddy

Nucleic Acids Res., 2004

2003

A comparison of Pfam and MEROPS: Two databases, one comprehensive, and one specialised.

David J. Studholme, Neil D. Rawlings, Alan J. Barrett, Alex Bateman

BMC Bioinform., 2003