Dominik Heider

  • Philipps-University of Marburg, Germany

According to our database1, Dominik Heider authored at least 51 papers between 2007 and 2023.

Collaborative distances:



In proceedings 
PhD thesis 


Online presence:



Interactive polar diagrams for model comparison.
Comput. Methods Programs Biomed., December, 2023

Unsupervised encoding selection through ensemble pruning for biomedical classification.
BioData Min., January, 2023

Human-in-the-Loop Causal Discovery under Latent Confounding using Ancestral GFlowNets.
CoRR, 2023

Human-in-the-Loop Integration with Domain-Knowledge Graphs for Explainable Federated Deep Learning.
Proceedings of the Machine Learning and Knowledge Extraction, 2023

Evaluation of machine learning strategies for imaging confirmed prostate cancer recurrence prediction on electronic health records.
Comput. Biol. Medicine, 2022

Prediction of antimicrobial resistance based on whole-genome sequencing and machine learning.
Bioinform., 2022

Federated Random Forests can improve local performance of predictive models for various healthcare applications.
Bioinform., 2022

Correction: Ten simple rules to colorize biological data visualization.
PLoS Comput. Biol., 2021

Machine learning with asymmetric abstention for biomedical decision-making.
BMC Medical Informatics Decis. Mak., 2021

The FeatureCloud AI Store for Federated Learning in Biomedicine and Beyond.
CoRR, 2021

MOSGA: Modular Open-Source Genome Annotator.
Bioinform., 2021

Gaussian noise up-sampling is better suited than SMOTE and ADASYN for clinical decision making.
BioData Min., 2021

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.
Briefings Bioinform., 2021

Ten simple rules to colorize biological data visualization.
PLoS Comput. Biol., 2020

Privacy-preserving Artificial Intelligence Techniques in Biomedicine.
CoRR, 2020

Natrix: a Snakemake-based workflow for processing, clustering, and taxonomically assigning amplicon sequencing reads.
BMC Bioinform., 2020

MESA: automated assessment of synthetic DNA fragments and simulation of DNA synthesis, storage, sequencing and PCR errors.
Bioinform., 2020

Deep learning on chaos game representation for proteins.
Bioinform., 2020

Phi-Delta-Diagrams: Software Implementation of a Visual Tool for Assessing Classifier and Feature Performance.
Mach. Learn. Knowl. Extr., 2019

The Virtual Doctor: An Interactive Artificial Intelligence based on Deep Learning for Non-Invasive Prediction of Diabetes.
CoRR, 2019

GUESS: projecting machine learning scores to well-calibrated probability estimates for clinical decision-making.
Bioinform., 2019

Encodings and models for antimicrobial peptide classification for multi-resistant pathogens.
BioData Min., 2019

The virtual doctor: An interactive clinical-decision-support system based on deep learning for non-invasive prediction of diabetes.
Artif. Intell. Medicine, 2019

FRI-Feature Relevance Intervals for Interpretable and Interactive Data Exploration.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2019

SCOTCH: subtype A coreceptor tropism classification in HIV-1.
Bioinform., 2018

eccCL: parallelized GPU implementation of Ensemble Classifier Chains.
BMC Bioinform., 2017

EFS: an ensemble feature selection tool implemented as R-package and web-application.
BioData Min., 2017

SHIVA - a web application for drug resistance and tropism testing in HIV.
BMC Bioinform., 2016

Exploiting HIV-1 protease and reverse transcriptase cross-resistance information for improved drug resistance prediction by means of multi-label classification.
BioData Min., 2016

Compensation of feature selection biases accompanied with improved predictive performance for binary classification by using a novel ensemble feature selection approach.
BioData Min., 2016

The EFS-Server: A Web-Application for Feature Selection in Binary Classification.
Proceedings of the 2nd International Workshop on Knowledge Discovery on the WEB, 2016

gCUP: rapid GPU-based HIV-1 co-receptor usage prediction for next-generation sequencing.
Bioinform., 2014

A simple structure-based model for the prediction of HIV-1 co-receptor tropism.
BioData Min., 2014

Multilabel classification for exploiting cross-resistance information in HIV-1 drug resistance prediction.
Bioinform., 2013

On the Application of Supervised Machine Learning to Trustworthiness Assessment.
Proceedings of the 12th IEEE International Conference on Trust, 2013

The Brain in a Box - An Encoding Scheme for Natural Neural Networks.
Proceedings of the IJCCI 2012 - Proceedings of the 4th International Joint Conference on Computational Intelligence, Barcelona, Spain, 5, 2012

Unsupervised Dimension Reduction Methods for Protein Sequence Classification.
Proceedings of the Data Analysis, Machine Learning and Knowledge Discovery, 2012

Reputation-Based Trust Diffusion in Complex Socio-Economic Networks.
Proceedings of the Information Retrieval and Mining in Distributed Environments, 2011

Group-Agreement as a Reliability Measure for Witness Recommendations in Reputation-Based Trust Protocols.
Trans. Comput. Sci., 2011

Interpol: An R package for preprocessing of protein sequences.
BioData Min., 2011

Improved Bevirimat resistance prediction by combination of structural and sequence-based classifiers.
BioData Min., 2011

Computational Design of a DNA- and Fc-Binding Fusion Protein.
Adv. Bioinformatics, 2011

Prediction of Co-Receptor Usage of HIV-1 from Genotype.
PLoS Comput. Biol., 2010

fMRI Data Visualization with BrainBlend and Blender.
Neuroinformatics, 2010

Predicting Bevirimat resistance of HIV-1 from genotype.
BMC Bioinform., 2010

Augmenting Reputation-Based Trust Metrics with Rumor-Like Dissemination of Reputation Information.
Proceedings of the Security and Privacy - Silver Linings in the Cloud, 2010

Harnessing Recommendations from Weakly Linked Neighbors in Reputation-Based Trust Formation.
Proceedings of the 2010 International Conference on CyberWorlds, 2010

DNA based watermarks.
PhD thesis, 2008

Watermarking sexually reproducing diploid organisms.
Bioinform., 2008

DNA-based watermarks using the DNA-Crypt algorithm.
BMC Bioinform., 2007