Lin Zhang

Orcid: 0000-0002-7404-5231

Affiliations:
  • China University of Mining and Technology, SIEE, Xuzhou, China


According to our database1, Lin Zhang authored at least 36 papers between 2009 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2024
MSCAN: multi-scale self- and cross-attention network for RNA methylation site prediction.
BMC Bioinform., December, 2024

DaCSeg: Divide and conquer for accurate overlapping chromosome instance segmentation in metaphase cell images.
Biomed. Signal Process. Control., 2024

2023
MULGA, a unified multi-view graph autoencoder-based approach for identifying drug-protein interaction and drug repositioning.
Bioinform., September, 2023

FGFICA: Independent Component Analysis of Fusion Genomic Features for Mining Epi-Transcriptome Profiling Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2022
BDBB: A Novel Beta-Distribution-Based Biclustering Algorithm for Revealing Local Co-Methylation Patterns in Epi-Transcriptome Profiling Data.
IEEE J. Biomed. Health Informatics, 2022

BRPCA: Bounded Robust Principal Component Analysis to Incorporate Similarity Network for N7-Methylguanosine(m<sup>7</sup>G) Site-Disease Association Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

FBCwPlaid: A Functional Biclustering Analysis of Epi-Transcriptome Profiling Data Via a Weighted Plaid Model.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Pedestrian Detection with Multi-View Convolution Fusion Algorithm.
Entropy, 2022

EMDLP: Ensemble multiscale deep learning model for RNA methylation site prediction.
BMC Bioinform., 2022

LRTCLS: low-rank tensor completion with Laplacian smoothing regularization for unveiling the post-transcriptional machinery of <i>N</i>6-methylation (m6A)-mediated diseases.
Briefings Bioinform., 2022

2021
ARMS Net: Overlapping chromosome segmentation based on Adaptive Receptive field Multi-Scale network.
Biomed. Signal Process. Control., 2021

EDLm<sup>6</sup>APred: ensemble deep learning approach for mRNA m<sup>6</sup>A site prediction.
BMC Bioinform., 2021

m7GDisAI: N7-methylguanosine (m7G) sites and diseases associations inference based on heterogeneous network.
BMC Bioinform., 2021

Bioinformatic analysis of SMN1-ACE/ACE2 interactions hinted at a potential protective effect of spinal muscular atrophy against COVID-19-induced lung injury.
Briefings Bioinform., 2021

Multi-omic analysis suggests tumor suppressor genes evolved specific promoter features to optimize cancer resistance.
Briefings Bioinform., 2021

Lysosome activation in peripheral blood mononuclear cells and prognostic significance of circulating LC3B in COVID-19.
Briefings Bioinform., 2021

Development of an Open-Access and Explainable Machine Learning Prediction System to Assess the Mortality and Recurrence Risk Factors of Clostridioides Difficile Infection Patients.
Adv. Intell. Syst., 2021

2020
REW-ISA: unveiling local functional blocks in epi-transcriptome profiling data via an RNA expression-weighted iterative signature algorithm.
BMC Bioinform., 2020

2019
m6Acomet: large-scale functional prediction of individual m6A RNA methylation sites from an RNA co-methylation network.
BMC Bioinform., 2019

RNA methylation and diseases: experimental results, databases, Web servers and computational models.
Briefings Bioinform., 2019

2018
MeTDiff: A Novel Differential RNA Methylation Analysis for MeRIP-Seq Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018

MeT-DB V2.0: elucidating context-specific functions of N6-methyl-adenosine methyltranscriptome.
Nucleic Acids Res., 2018

trumpet: transcriptome-guided quality assessment of m6A-seq data.
BMC Bioinform., 2018

2017
Cancer Progression Prediction Using Gene Interaction Regularized Elastic Net.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017

2015
MeT-DB: a database of transcriptome methylation in mammalian cells.
Nucleic Acids Res., 2015

Sketching the distribution of transcriptomic features on RNA transcripts with Travis coordinates.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
Differential analysis of RNA methylome with improved spatial resolution.
Proceedings of the 2014 IEEE Global Conference on Signal and Information Processing, 2014

Detecting differentially methylated mRNA from MeRIP-Seq with likelihood ratio test.
Proceedings of the 2014 IEEE Global Conference on Signal and Information Processing, 2014

2013
Integration of gene expression, genome wide DNA methylation, and gene networks for clinical outcome prediction in ovarian cancer.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Unveiling the dynamics in RNA epigenetic regulations.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
An investigation of clinical outcome prediction from integrative genomic profiles in ovarian cancer.
Proceedings of the Proceedings 2012 IEEE International Workshop on Genomic Signal Processing and Statistics, 2012

2011
Clustering DNA methylation expressions using nonparametric beta mixture model.
Proceedings of the 2011 IEEE International Workshop on Genomic Signal Processing and Statistics, 2011

2010
Bayesian peptide peak detection for high resolution TOF mass spectrometry.
IEEE Trans. Signal Process., 2010

miRNA Target Prediction Method Based on the Combination of Multiple Algorithms.
Proceedings of the Advanced Intelligent Computing Theories and Applications, 2010

SysMicrO: A Novel Systems Approach for miRNA Target Prediction.
Proceedings of the Advanced Intelligent Computing Theories and Applications. With Aspects of Artificial Intelligence, 2010

2009
A Bayesian Approach for Identifying miRNA Targets by Combining Sequence Prediction and Expression Profiling.
Proceedings of the International Joint Conferences on Bioinformatics, 2009


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