Rafael S. Costa

Orcid: 0000-0002-7539-488X

According to our database1, Rafael S. Costa authored at least 23 papers between 2009 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2024
TriSig: Evaluating the statistical significance of triclusters.
Pattern Recognit., 2024

Integrating Statistical Significance and Discriminative Power in Pattern Discovery.
CoRR, 2024

2023
SBML2HYB: a Python interface for SBML compatible hybrid modeling.
Bioinform., January, 2023

TriSig: Assessing the statistical significance of triclusters.
CoRR, 2023

2022
Scaling pattern mining through non-overlapping variable partitioning.
CoRR, 2022

IPOscore: An interactive web-based platform for postoperative surgical complications analysis and prediction in the oncology domain.
Comput. Methods Programs Biomed., 2022

A general deep hybrid model for bioreactor systems: Combining first principles with deep neural networks.
Comput. Chem. Eng., 2022

Enrichment analysis on regulatory subspaces: A novel direction for the superior description of cellular responses to SARS-CoV-2.
Comput. Biol. Medicine, 2022

Context-situated visualization of biclusters to aid decisions: going beyond subspaces with parallel coordinates.
Proceedings of the AVI 2022: International Conference on Advanced Visual Interfaces, Frascati, Rome, Italy, June 6, 2022

2021
Mining Pre-Surgical Patterns Able to Discriminate Post-Surgical Outcomes in the Oncological Domain.
IEEE J. Biomed. Health Informatics, 2021

On the predictability of postoperative complications for cancer patients: a Portuguese cohort study.
BMC Medical Informatics Decis. Mak., 2021

DI2: prior-free and multi-item discretization ofbiomedical data and its applications.
CoRR, 2021

DI2: prior-free and multi-item discretization of biological data and its applications.
BMC Bioinform., 2021

2020
KiMoSys 2.0: an upgraded database for submitting, storing and accessing experimental data for kinetic modeling.
Database J. Biol. Databases Curation, 2020

2016
Toward Community Standards and Software for Whole-Cell Modeling.
IEEE Trans. Biomed. Eng., 2016

2014
Identifying IIR filter coefficients using particle swarm optimization with application to reconstruction of missing cardiovascular signals.
Eng. Appl. Artif. Intell., 2014

KiMoSys: a web-based repository of experimental data for KInetic MOdels of biological SYStems.
BMC Syst. Biol., 2014

Exploring the Cellular Objective in Flux Balance Constraint-Based Models.
Proceedings of the Computational Methods in Systems Biology, 2014

2012
Multi-level Dynamic Modeling in Biological Systems - Application of Hybrid Petri Nets to Network Simulation.
Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012

2010
Hybrid dynamic modeling of Escherichia coli central metabolic network combining Michaelis-Menten and approximate kinetic equations.
Biosyst., 2010

Model Transformation of Metabolic Networks using a Petri Net Based Framework.
Proceedings of the Workshops of the 31st International Conference on Application and Theory of Petri Nets and Other Models of Concurrency (PETRI NETS 2010) and of the 10th International Conference on Application of Concurrency to System Design (ACSD 2010), 2010

2009
A Critical Review on Modelling Formalisms and Simulation Tools in Computational Biosystems.
Proceedings of the Distributed Computing, 2009

Large Scale Dynamic Model Reconstruction for the Central Carbon Metabolism of Escherichia coli .
Proceedings of the Distributed Computing, 2009


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