Chris T. A. Evelo

Orcid: 0000-0002-5301-3142

Affiliations:
  • Maastricht University, Department of Bioinformatics, The Netherlands


According to our database1, Chris T. A. Evelo authored at least 41 papers between 2006 and 2023.

Collaborative distances:

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2023
PSnpBind-ML: predicting the effect of binding site mutations on protein-ligand binding affinity.
J. Cheminformatics, December, 2023

Managing food and microbiome studies data using Fairspace, a flexible and FAIR data management platform.
Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023

2022
PSnpBind: a database of mutated binding site protein-ligand complexes constructed using a multithreaded virtual screening workflow.
J. Cheminformatics, 2022

A formalization of one of the main claims of "Overlap of vitamin A and vitamin D target genes with CAKUT-related processes" by Ozisik et al. 20211.
Data Sci., 2022

A Simple Standard for Sharing Ontological Mappings (SSSOM).
Database J. Biol. Databases Curation, 2022

2021
Comparison of metabolic states using genome-scale metabolic models.
PLoS Comput. Biol., 2021

Ten simple rules for creating reusable pathway models for computational analysis and visualization.
PLoS Comput. Biol., 2021

Ten simple rules to make your publication look better.
PLoS Comput. Biol., 2021

WikiPathways: connecting communities.
Nucleic Acids Res., 2021

2020
The need for standardisation in life science research - an approach to excellence and trust.
F1000Research, 2020

FAIR Principles: Interpretations and Implementation Considerations.
Data Intell., 2020

2018
WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research.
Nucleic Acids Res., 2018

CyTargetLinker app update: A flexible solution for network extension in Cytoscape.
F1000Research, 2018

Providing gene-to-variant and variant-to-gene database identifier mappings to use with BridgeDb mapping services.
F1000Research, 2018

Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data.
Proceedings of the 14th IEEE International Conference on e-Science, 2018

2017
Erratum to: The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching.
J. Cheminformatics, 2017

The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching.
J. Cheminformatics, 2017

Visualizing Metabolomics Data in Directed Biological Networks.
Proceedings of the 10th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS 2017), 2017

Reliable Granular References to Changing Linked Data.
Proceedings of the Semantic Web - ISWC 2017, 2017

2016
Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources.
PLoS Comput. Biol., 2016

Reactome from a WikiPathways Perspective.
PLoS Comput. Biol., 2016

WikiPathways: capturing the full diversity of pathway knowledge.
Nucleic Acids Res., 2016

XMetDB: an open access database for xenobiotic metabolism.
J. Cheminformatics, 2016

The systems biology format converter.
BMC Bioinform., 2016

Finding Drugs with Common Downstream Effects, Using Direction Information in Biological Pathways.
Proceedings of the 9th International Conference Semantic Web Applications and Tools for Life Sciences, 2016

2015
PathVisio 3: An Extendable Pathway Analysis Toolbox.
PLoS Comput. Biol., 2015

Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment.
BMC Bioinform., 2015

diXa: a data infrastructure for chemical safety assessment.
Bioinform., 2015

2014
Applying linked data approaches to pharmacology: Architectural decisions and implementation.
Semantic Web, 2014

Integrated Visualization of a Multi-omics Study of Starvation in Mouse Intestine.
J. Integr. Bioinform., 2014


2013
User-friendly solutions for microarray quality control and pre-processing on ArrayAnalysis.org.
Nucleic Acids Res., 2013

2012
WikiPathways: building research communities on biological pathways.
Nucleic Acids Res., 2012

GO-Elite: a flexible solution for pathway and ontology over-representation.
Bioinform., 2012

Scientific Lenses over Linked Data: An Approach to Support Task Specific Views of the Data. A Vision.
Proceedings of the Second International Workshop on Linked Science 2012, 2012

The Pharmacology Workspace: A Platform for Drug Discovery.
Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

2011
Exploring pathway interactions in insulin resistant mouse liver.
BMC Syst. Biol., 2011

2010
The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services.
BMC Bioinform., 2010

2008
Presenting and exploring biological pathways with PathVisio.
BMC Bioinform., 2008

2007
Linking microarray reporters with protein functions.
BMC Bioinform., 2007

2006
Biologically relevant effects of mRNA amplification on gene expression profiles.
BMC Bioinform., 2006


  Loading...