Asma Ben Abacha

Orcid: 0000-0001-6312-9387

Affiliations:
  • Lister Hill National Center, U.S. National Library of Medicine, Bethesda, MD, USA


According to our database1, Asma Ben Abacha authored at least 77 papers between 2010 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024

2023

Extracting social determinants of health from clinical note text with classification and sequence-to-sequence approaches.
J. Am. Medical Informatics Assoc., July, 2023

3D-MIR: A Benchmark and Empirical Study on 3D Medical Image Retrieval in Radiology.
CoRR, 2023

ACI-BENCH: a Novel Ambient Clinical Intelligence Dataset for Benchmarking Automatic Visit Note Generation.
CoRR, 2023

An Investigation of Evaluation Metrics for Automated Medical Note Generation.
CoRR, 2023


An Empirical Study of Clinical Note Generation from Doctor-Patient Encounters.
Proceedings of the 17th Conference of the European Chapter of the Association for Computational Linguistics, 2023

Overview of the MEDIQA-Sum Task at ImageCLEF 2023: Summarization and Classification of Doctor-Patient Conversations.
Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), 2023

Overview of ImageCLEFmedical 2023 - Caption Prediction and Concept Detection.
Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), 2023


An Investigation of Evaluation Methods in Automatic Medical Note Generation.
Proceedings of the Findings of the Association for Computational Linguistics: ACL 2023, 2023

Overview of the MEDIQA-Chat 2023 Shared Tasks on the Summarization & Generation of Doctor-Patient Conversations.
Proceedings of the 5th Clinical Natural Language Processing Workshop, 2023

2022
Question-aware transformer models for consumer health question summarization.
J. Biomed. Informatics, 2022


Overview of ImageCLEFmedical 2022 - Caption Prediction and Concept Detection.
Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to, 2022


2021
Goal-Driven Visual Question Generation from Radiology Images.
Inf., 2021

Multi-Task Transfer Learning with Data Augmentation for Recognizing Question Entailment in the Medical Domain.
Proceedings of the 9th IEEE International Conference on Healthcare Informatics, 2021

Evidence-based Fact-Checking of Health-related Claims.
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2021, 2021


NLM at BioASQ Synergy 2021: Deep Learning-based Methods for Biomedical Semantic Question Answering about COVID-19.
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021

Overview of the ImageCLEFmed 2021 Concept & Caption Prediction Task.
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021


Overview of the VQA-Med Task at ImageCLEF 2021: Visual Question Answering and Generation in the Medical Domain.
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021

Overview of the MEDIQA 2021 Shared Task on Summarization in the Medical Domain.
Proceedings of the 20th Workshop on Biomedical Language Processing, 2021

Reproducibility in biomedical natural language processing: A FAIR approach to what we need to know.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Reinforcement Learning for Abstractive Question Summarization with Question-aware Semantic Rewards.
Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing, 2021

2020
Consumer health information and question answering: helping consumers find answers to their health-related information needs.
J. Am. Medical Informatics Assoc., 2020

Question-Driven Summarization of Answers to Consumer Health Questions.
CoRR, 2020

NLM at TREC 2020 Health Misinformation and Deep Learning Tracks.
Proceedings of the Twenty-Ninth Text REtrieval Conference, 2020



Overview of the VQA-Med Task at ImageCLEF 2020: Visual Question Answering and Generation in the Medical Domain.
Proceedings of the Working Notes of CLEF 2020, 2020

2019
A question-entailment approach to question answering.
BMC Bioinform., 2019

Bridging the Gap Between Consumers' Medication Questions and Trusted Answers.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019



VQA-Med: Overview of the Medical Visual Question Answering Task at ImageCLEF 2019.
Proceedings of the Working Notes of CLEF 2019, 2019

Overview of the MEDIQA 2019 Shared Task on Textual Inference, Question Entailment and Question Answering.
Proceedings of the 18th BioNLP Workshop and Shared Task, 2019

On the Summarization of Consumer Health Questions.
Proceedings of the 57th Conference of the Association for Computational Linguistics, 2019

2018
Semantic annotation of consumer health questions.
BMC Bioinform., 2018

NLM at ImageCLEF 2018 Visual Question Answering in the Medical Domain.
Proceedings of the Working Notes of CLEF 2018, 2018

2017
Overview of the Medical Question Answering Task at TREC 2017 LiveQA.
Proceedings of The Twenty-Sixth Text REtrieval Conference, 2017

NLM_NIH at SemEval-2017 Task 3: from Question Entailment to Question Similarity for Community Question Answering.
Proceedings of the 11th International Workshop on Semantic Evaluation, 2017

NLM at ImageCLEF 2017 Caption Task.
Proceedings of the Working Notes of CLEF 2017, 2017

Named entity recognition in functional neuroimaging literature.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016
Meta-Learning with Selective Data Augmentation for Medical Entity Recognition.
Int. J. Comput. Linguistics Appl., 2016

Towards natural language question generation for the validation of ontologies and mappings.
J. Biomed. Semant., 2016

NLM NIH at TREC 2016 Clinical Decision Support Track.
Proceedings of The Twenty-Fifth Text REtrieval Conference, 2016

Annotating Named Entities in Consumer Health Questions.
Proceedings of the Tenth International Conference on Language Resources and Evaluation LREC 2016, 2016

A Hybrid Approach to Generation of Missing Abstracts in Biomedical Literature.
Proceedings of the COLING 2016, 2016

Recognizing Question Entailment for Medical Question Answering.
Proceedings of the AMIA 2016, 2016

2015
Text mining for pharmacovigilance: Using machine learning for drug name recognition and drug-drug interaction extraction and classification.
J. Biomed. Informatics, 2015

MEANS: A medical question-answering system combining NLP techniques and semantic Web technologies.
Inf. Process. Manag., 2015

LIST at TREC 2015 Clinical Decision Support Track: Question Analysis and Unsupervised Result Fusion.
Proceedings of The Twenty-Fourth Text REtrieval Conference, 2015

LIST-LUX: Disorder Identification from Clinical Texts.
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015

Semantic Analysis and Automatic Corpus Construction for Entailment Recognition in Medical Texts.
Proceedings of the Artificial Intelligence in Medicine, 2015

2014
MEANS : une approche sémantique pour la recherche de réponses aux questions médicales.
Trait. Autom. des Langues, 2014

CRP Henri Tudor at TREC 2014: Combining Search Results for Clinical Decision Support.
Proceedings of The Twenty-Third Text REtrieval Conference, 2014

2013
Automatic Information Extraction in the Medical Domain by Cross-Lingual Projection.
Proceedings of the IEEE International Conference on Healthcare Informatics, 2013

Une approche pour la validation du contenu d'une ontologie par un système à base de questions/réponses.
Proceedings of the IC 2013 : 24es Journées francophones d'Ingénierie des Connaissances (Proceedings of the 24th French Knowledge Engineering Conference), 2013

Medical Ontology Validation through Question Answering.
Proceedings of the Artificial Intelligence in Medicine, 2013

2012
Recherche de réponses précises à des questions médicales : le système de questions-réponses MEANS. (Finding precise answers to medical questions : the question-answering system MEANS).
PhD thesis, 2012

An empirical comparative study of medical entity recognition.
Trait. Autom. des Langues, 2012

Extraction d'information automatique en domaine médical par projection inter-langue : vers un passage à l'échelle (Automatic Information Extraction in the Medical Domain by Cross-Lingual Projection) [in French].
Proceedings of the Joint Conference JEP-TALN-RECITAL 2012, 2012

Medical question answering: translating medical questions into sparql queries.
Proceedings of the ACM International Health Informatics Symposium, 2012

Analyse et transformation des questions médicales en requêtes SPARQL.
Proceedings of the CORIA (Conférence en Recherche d'Infomations et Applications), 2012

Adaptation of LIMSI's QALC for QA4MRE.
Proceedings of the CLEF 2012 Evaluation Labs and Workshop, 2012

2011
Hybrid methods for improving information access in clinical documents: concept, assertion, and relation identification.
J. Am. Medical Informatics Assoc., 2011

Automatic extraction of semantic relations between medical entities: a rule based approach.
J. Biomed. Semant., 2011

Extraction d'informations médicales au LIMSI (Medical information extraction at LIMSI).
Proceedings of the Actes de la 18e conférence sur le Traitement Automatique des Langues Naturelles. Démonstrations, 2011

A Hybrid Approach for the Extraction of Semantic Relations from MEDLINE Abstracts.
Proceedings of the Computational Linguistics and Intelligent Text Processing, 2011

Medical Entity Recognition: A Comparaison of Semantic and Statistical Methods.
Proceedings of the 2011 Workshop on Biomedical Natural Language Processing, 2011

2010
MeTAE : Plate-forme d'annotation automatique et d'exploration sémantiques pour le domaine médical.
Proceedings of the Actes de la 17e conférence sur le Traitement Automatique des Langues Naturelles. Démonstrations, 2010

Automatic Extraction of semantic relations between medical entities: Application to the treatment relation.
Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, 2010

Annotation et Interrogation Sémantiques de Textes Médicaux.
Proceedings of the Web Sémantique Médical workshop, 2010


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