Axel von Kamp

According to our database, Axel von Kamp authored at least 16 papers between 2005 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Balancing biomass reaction stoichiometry and measured fluxes in flux balance analysis.

Axel von Kamp, Steffen Klamt

Bioinform., October, 2023

2022

StrainDesign: a comprehensive Python package for computational design of metabolic networks.

Philipp Schneider, Pavlos Stephanos Bekiaris, Axel von Kamp, Steffen Klamt

Bioinform., October, 2022

CNApy: a CellNetAnalyzer GUI in Python for analyzing and designing metabolic networks.

Sven Thiele, Axel von Kamp, Pavlos Stephanos Bekiaris, Philipp Schneider, Steffen Klamt

Bioinform., 2022

2020

An extended and generalized framework for the calculation of metabolic intervention strategies based on minimal cut sets.

Philipp Schneider, Axel von Kamp, Steffen Klamt

PLoS Comput. Biol., 2020

Speeding up the core algorithm for the dual calculation of minimal cut sets in large metabolic networks.

Steffen Klamt, Radhakrishnan Mahadevan, Axel von Kamp

BMC Bioinform., 2020

2018

OptMDFpathway: Identification of metabolic pathways with maximal thermodynamic driving force and its application for analyzing the endogenous CO2 fixation potential of Escherichia coli.

Oliver Hädicke, Axel von Kamp, Timur Aydogan, Steffen Klamt

PLoS Comput. Biol., 2018

2015

Genome-scale strain designs based on regulatory minimal cut sets.

Radhakrishnan Mahadevan, Axel von Kamp, Steffen Klamt

Bioinform., 2015

2014

Enumeration of Smallest Intervention Strategies in Genome-Scale Metabolic Networks.

Axel von Kamp, Steffen Klamt

PLoS Comput. Biol., 2014

Stoichiometric and Constraint-Based Analysis of Biochemical Reaction Networks.

Steffen Klamt, Oliver Hädicke, Axel von Kamp

Proceedings of the Large-Scale Networks in Engineering and Life Sciences, 2014

2013

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.

Claudine Chaouiya, Duncan Bérenguier, Sarah M. Keating, Aurélien Naldi, Martijn P. van Iersel, Nicolas Rodriguez, Andreas Dräger, Finja Büchel, Thomas Cokelaer, Bryan M. Kowal, Benjamin Wicks, Emanuel J. V. Gonçalves, Julien Dorier, Michel Page, Pedro T. Monteiro, Axel von Kamp, Ioannis Xenarios, Hidde de Jong, Michael Hucka, Steffen Klamt, Denis Thieffry, Nicolas Le Novère, Julio Saez-Rodriguez, Tomás Helikar

BMC Syst. Biol., 2013

2012

Minimal cut sets in a metabolic network are elementary modes in a dual network.

Kathrin Ballerstein, Axel von Kamp, Steffen Klamt, Utz-Uwe Haus

Bioinform., 2012

2011

An application programming interface for CellNetAnalyzer.

Steffen Klamt, Axel von Kamp

Biosyst., 2011

2010

Computing Combinatorial Intervention Strategies and Failure Modes in Signaling Networks.

Regina Samaga, Axel von Kamp, Steffen Klamt

J. Comput. Biol., 2010

2009

Computing paths and cycles in biological interaction graphs.

Steffen Klamt, Axel von Kamp

BMC Bioinform., 2009

2006

Metatool 5.0: fast and flexible elementary modes analysis.

Axel von Kamp, Stefan Schuster

Bioinform., 2006

2005

YANA - a software tool for analyzing flux modes, gene-expression and enzyme activities.

Roland Schwarz, Patrick Musch, Axel von Kamp, Bernd Engels, R. Heiner Schirmer, Stefan Schuster, Thomas Dandekar

BMC Bioinform., 2005