Martijn P. van Iersel

Orcid: 0000-0002-5877-4338

According to our database1, Martijn P. van Iersel authored at least 19 papers between 2008 and 2016.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2016
The systems biology format converter.
BMC Bioinform., 2016

2015
PathVisio 3: An Extendable Pathway Analysis Toolbox.
PLoS Comput. Biol., 2015

The Systems Biology Markup Language (SBML) Level 3 Package: Qualitative Models, Version 1, Release 1.
J. Integr. Bioinform., 2015

Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment.
BMC Bioinform., 2015

2014
Integrated Visualization of a Multi-omics Study of Starvation in Mouse Intestine.
J. Integr. Bioinform., 2014

BridgeDb app: unifying identifier mapping services for Cytoscape.
F1000Research, 2014

2013
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.
BMC Syst. Biol., 2013

Path2Models: large-scale generation of computational models from biochemical pathway maps.
BMC Syst. Biol., 2013

CySBGN: A Cytoscape plug-in to integrate SBGN maps.
BMC Bioinform., 2013

PathVisio-Faceted Search: an exploration tool for multi-dimensional navigation of large pathways.
Bioinform., 2013

Linked Data Services for Scientists Exemplified Using Drosophila Melanogaster Datasets.
Proceedings of the 6th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2013

2012
WikiPathways: building research communities on biological pathways.
Nucleic Acids Res., 2012

CellNOptR: a flexible toolkit to train protein signaling networks to data using multiple logic formalisms.
BMC Syst. Biol., 2012

Software support for SBGN maps: SBGN-ML and LibSBGN.
Bioinform., 2012

PathVisio-Validator: a rule-based validation plugin for graphical pathway notations.
Bioinform., 2012

Flexible Integration and Visualisation of Drosophila Melanogaster Datasets.
Proceedings of the 5th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2012

2011
PathVisio-MIM: PathVisio plugin for creating and editing Molecular Interaction Maps (MIMs).
Bioinform., 2011

2010
The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services.
BMC Bioinform., 2010

2008
Presenting and exploring biological pathways with PathVisio.
BMC Bioinform., 2008


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