Dariusz Plewczynski
Orcid: 0000-0002-3840-7610
According to our database1,
Dariusz Plewczynski
authored at least 79 papers
between 2004 and 2023.
Collaborative distances:
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Bibliography
2023
Bioinform., October, 2023
Inferring CTCF-binding patterns and anchored loops across human tissues and cell types.
Patterns, August, 2023
BERTrand - peptide:TCR binding prediction using Bidirectional Encoder Representations from Transformers augmented with random TCR pairing.
Bioinform., August, 2023
3D-GNOME 3.0: a three-dimensional genome modelling engine for analysing changes of promoter-enhancer contacts in the human genome.
Nucleic Acids Res., July, 2023
Quant. Biol., June, 2023
ccLoopER: Deep Prediction of CTCF and cohesin Mediated Chromatin looping Using DNA Transformer Model.
Proceedings of the Pattern Recognition and Machine Intelligence, 2023
2022
Bioinform., December, 2022
JUPPI: A Multi-Level Feature Based Method for PPI Prediction and a Refined Strategy for Performance Assessment.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022
Correction to: 3dSpAn: An interactive software for 3D segmentation and analysis of dendritic spines.
Neuroinformatics, 2022
3dSpAn: An interactive software for 3D segmentation and analysis of dendritic spines.
Neuroinformatics, 2022
Nucleic Acids Res., 2022
MCIBox: a toolkit for single-molecule multi-way chromatin interaction visualization and micro-domains identification.
Briefings Bioinform., 2022
Genome-Wide Analysis to Identify Palindromes, Mirror and Inverted Repeats in SARS-CoV-2, MERS-CoV and SARS-CoV-1.
IEEE Access, 2022
2021
PartSeg: a tool for quantitative feature extraction from 3D microscopy images for dummies.
BMC Bioinform., 2021
2020
3D-GNOME 2.0: a three-dimensional genome modeling engine for predicting structural variation-driven alterations of chromatin spatial structure in the human genome.
Nucleic Acids Res., 2020
The Mixture of Autoregressive Hidden Markov Models of Morphology for Dentritic Spines During Activation Process.
J. Comput. Biol., 2020
2019
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019
IEEE ACM Trans. Comput. Biol. Bioinform., 2019
An empirical Bayes approach for learning directed acyclic graph using MCMC algorithm.
Stat. Anal. Data Min., 2019
Dendritic Spines Taxonomy: The Functional and Structural Classification • Time-Dependent Probabilistic Model of Neuronal Activation.
J. Comput. Biol., 2019
A Multivariate Negative-Binomial Model with Random Effects for Differential Gene-Expression Analysis of Correlated mRNA Sequencing Data.
J. Comput. Biol., 2019
Identification of Epigenetic Biomarkers with the use of Gene Expression and DNA Methylation for Breast Cancer Subtypes.
Proceedings of the TENCON 2019, 2019
Survival Analysis with the Integration of RNA-Seq and Clinical Data to Identify Breast Cancer Subtype Specific Genes.
Proceedings of the Pattern Recognition and Machine Intelligence, 2019
Deep Learning for Detection and Localization of Thoracic Diseases Using Chest X-Ray Imagery.
Proceedings of the Artificial Intelligence and Soft Computing, 2019
A new evolutionary rough fuzzy integrated machine learning technique for microRNA selection using next-generation sequencing data of breast cancer.
Proceedings of the Genetic and Evolutionary Computation Conference Companion, 2019
2018
Deep Learning for Integrated Analysis of Breast Cancer Subtype Specific Multi-omics Data.
Proceedings of the TENCON 2018, 2018
2017
Proceedings of the Foundations of Intelligent Systems - 23rd International Symposium, 2017
2016
Highlights from the 11th ISCB Student Council Symposium 2015: Dublin, Ireland. 10 July 2015.
BMC Bioinform., February, 2016
Trans. Comput. Collect. Intell., 2016
PeerJ Comput. Sci., 2016
Nucleic Acids Res., 2016
Frontiers Comput. Neurosci., 2016
2dSpAn: semiautomated 2-d segmentation, classification and analysis of hippocampal dendritic spine plasticity.
Bioinform., 2016
3DFlu: database of sequence and structural variability of the influenza hemagglutinin at population scale.
Database J. Biol. Databases Curation, 2016
2015
J. Chem. Inf. Model., 2015
A combined systems and structural modeling approach repositions antibiotics for Mycoplasma genitalium.
Comput. Biol. Chem., 2015
Analysis of Next-Generation Sequencing Data of miRNA for the Prediction of Breast Cancer.
Proceedings of the Swarm, Evolutionary, and Memetic Computing, 2015
MaER: A New Ensemble Based Multiclass Classifier for Binding Activity Prediction of HLA Class II Proteins.
Proceedings of the Pattern Recognition and Machine Intelligence, 2015
Proceedings of the Pattern Recognition and Machine Intelligence, 2015
2014
Optim. Lett., 2014
J. Comput. Biol., 2014
Proceedings of the BIOINFORMATICS 2014, 2014
Proceedings of the Advanced Computational Approaches to Biomedical Engineering, 2014
2013
A Consensus Approach for Identification of Protein-Protein Interaction Sites in Homo Sapiens.
Proceedings of the Pattern Recognition and Machine Intelligence, 2013
Proceedings of the Man-Machine Interactions 3, 2013
Proceedings of the Man-Machine Interactions 3, 2013
Proceedings of the Man-Machine Interactions 3, 2013
Generic Framework for Simulation of Cognitive Systems: A Case Study of Color Category Boundaries.
Proceedings of the Man-Machine Interactions 3, 2013
Proceedings of the 35th Annual Meeting of the Cognitive Science Society, 2013
2012
IEEE Geosci. Remote. Sens. Lett., 2012
Int. J. Data Min. Bioinform., 2012
Proceedings of the Second International Conference on Soft Computing for Problem Solving, 2012
Proceedings of Seventh International Conference on Bio-Inspired Computing: Theories and Applications (BIC-TA 2012), 2012
2011
J. Chem. Inf. Model., 2011
J. Comput. Chem., 2011
Can we trust docking results? Evaluation of seven commonly used programs on PDBbind database.
J. Comput. Chem., 2011
Fundam. Informaticae, 2011
Improvement of new automatic differential fuzzy clustering using SVM classifier for microarray analysis.
Expert Syst. Appl., 2011
Briefings Bioinform., 2011
Appl. Soft Comput., 2011
Proceedings of the Foundations of Intelligent Systems - 19th International Symposium, 2011
Proceedings of the Security and Intelligent Information Systems, 2011
Proceedings of the Man-Machine Interactions 2, 2011
Brainstorming - Agent based Meta-learning Approach.
Proceedings of the ICAART 2011 - Proceedings of the 3rd International Conference on Agents and Artificial Intelligence, Volume 2, 2011
Proceedings of the Biology, Computation and Linguistics - New Interdisciplinary Paradigms, 2011
2010
Cancer Classification using SVM-boosted Multiobjective Differential Fuzzy Clustering.
Proceedings of the STAIRS 2010, 2010
Consensus Multiobjective Differential Crisp Clustering for Categorical Data Analysis.
Proceedings of the Rough Sets and Current Trends in Computing, 2010
Improvement of Differential Crisp Clustering using ANN Classifier for Unsupervised Pixel Classification of Satellite Image.
Proceedings of the ICEIS 2010 - Proceedings of the 12th International Conference on Enterprise Information Systems, Volume 2, AIDSS, Funchal, Madeira, Portugal, June 8, 2010
Proceedings of the IEEE Congress on Evolutionary Computation, 2010
2008
Proceedings of the International Conference on Biocomputation, 2008
2006
J. Chem. Inf. Model., 2006
PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics.
BMC Bioinform., 2006
2005
AutoMotif server: prediction of single residue post-translational modifications in proteins.
Bioinform., 2005
2004
BMC Bioinform., 2004