Élodie Puybareau

According to our database, Élodie Puybareau authored at least 37 papers between 2015 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

<i>Where is VALDO?</i> VAscular Lesions Detection and segmentatiOn challenge at MICCAI 2021.

Carole H. Sudre, Kimberlin M. H. van Wijnen, Florian Dubost, Hieab Adams, David Atkinson, Frederik Barkhof, Mahlet A. Birhanu, Esther E. Bron, Robin Camarasa, Nish Chaturvedi, Yuan Chen, Zihao Chen, Shuai Chen, Qi Dou, Tavia E. Evans, Ivan Ezhov, Haojun Gao, Marta Gironés-Sangüesa, Juan Domingo Gispert, Beatriz Gomez Anson, Alun D. Hughes, Mohammad Arfan Ikram, Silvia Ingala, Hans Rolf Jäger, Florian Kofler, Hugo J. Kuijf, Denis Kutnar, Minho Lee, Bo Li, Luigi Lorenzini, Bjoern H. Menze, José Luis Molinuevo, Yiwei Pan, Élodie Puybareau, Rafael Rehwald, Ruisheng Su, Pengcheng Shi, Lorna Smith, Therese Tillin, Guillaume Tochon, Hélène Urien, Bas H. M. van der Velden, Isabelle F. van der Velpen, Benedikt Wiestler, Frank J. Wolters, Pinar Yilmaz, Marius de Groot, Meike W. Vernooij, Marleen de Bruijne

Medical Image Anal., January, 2024

2023

MyoPS: A benchmark of myocardial pathology segmentation combining three-sequence cardiac magnetic resonance images.

Lei Li, Fuping Wu, Sihan Wang, Xinzhe Luo, Carlos Martín-Isla, Shuwei Zhai, Jianpeng Zhang, Yanfei Liu, Zhen Zhang, Markus J. Ankenbrand, Haochuan Jiang, Xiaoran Zhang, Linhong Wang, Tewodros Weldebirhan Arega, Elif Altunok, Zhou Zhao, Feiyan Li, Jun Ma, Xiaoping Yang, Élodie Puybareau, Ilkay Öksüz, Stéphanie Bricq, Weisheng Li, Kumaradevan Punithakumar, Sotirios A. Tsaftaris, Laura Maria Schreiber, Mingjing Yang, Guocai Liu, Yong Xia, Guotai Wang, Sergio Escalera, Xiahai Zhuang

Medical Image Anal., 2023

Linear Object Detection in Document Images Using Multiple Object Tracking.

Philippe Bernet, Joseph Chazalon, Edwin Carlinet, Alexandre Bourquelot, Élodie Puybareau

Proceedings of the Document Analysis and Recognition - ICDAR 2023, 2023

Why is the Winner the Best?

Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha M. Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, A. Emre Kavur, Oldrich Kodym, Michal Kozubek, Jianning Li, Hongwei Bran Li, Jun Ma, Carlos Martín-Isla, Bjoern H. Menze, J. Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, Jonathan Rafael-Patino, Vivek Singh Bawa, Stefanie Speidel, Carole H. Sudre, Kimberlin M. H. van Wijnen, Martin Wagner, D. Wei, Amine Yamlahi, Moi Hoon Yap, C. Yuan, Maximilian Zenk, A. Zia, David Zimmerer, Dogu Baran Aydogan, Binod Bhattarai, Louise Bloch, Raphael Brüngel, J. Cho, C. Choi, Q. Dou, Ivan Ezhov, Christoph M. Friedrich, C. Fuller, Rebati Raman Gaire, Adrian Galdran, Álvaro García-Faura, Maria Grammatikopoulou, S. Hong, Mostafa Jahanifar, I. Jang, Abdolrahim Kadkhodamohammadi, I. Kang, Florian Kofler, S. Kondo, Hugo Jaco Kuijf, M. Li, M. Luu, Tomaz Martincic, Pedro Morais, Mohamed A. Naser, Bruno Oliveira, David Owen, S. Pang, J. Park, S. Park, Szymon Plotka, Élodie Puybareau, Nasir M. Rajpoot, K. Ryu, Numan Saeed, Adam Shephard, Pengcheng Shi, Dejan Stepec, Ronast Subedi, Guillaume Tochon, Helena R. Torres, Hélène Urien, João L. Vilaça, Kareem A. Wahid, H. Wang, J. Wang, L. Wang, X. Wang, Benedikt Wiestler, Marek Wodzinski, F. Xia, J. Xie, Z. Xiong, S. Yang, Y. Yang, Z. Zhao, Klaus H. Maier-Hein, Paul F. Jäger, Annette Kopp-Schneider, Lena Maier-Hein

Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

2022

Learning Grayscale Mathematical Morphology with Smooth Morphological Layers.

Romain Hermary, Guillaume Tochon, Élodie Puybareau, Alexandre Kirszenberg, Jesús Angulo

J. Math. Imaging Vis., 2022

Where is VALDO? VAscular Lesions Detection and segmentatiOn challenge at MICCAI 2021.

Carole H. Sudre, Kimberlin M. H. van Wijnen, Florian Dubost, Hieab Adams, David Atkinson, Frederik Barkhof, Mahlet A. Birhanu, Esther E. Bron, Robin Camarasa, Nish Chaturvedi, Yuan Chen, Zihao Chen, Shuai Chen, Qi Dou, Tavia E. Evans, Ivan Ezhov, Haojun Gao, Marta Gironés-Sangüesa, Juan Domingo Gispert, Beatriz Gomez Anson, Alun D. Hughes, Mohammad Arfan Ikram, Silvia Ingala, Hans Rolf Jäger, Florian Kofler, Hugo J. Kuijf, Denis Kutnar, Minho Lee, Bo Li, Luigi Lorenzini, Bjoern H. Menze, José Luis Molinuevo, Yiwei Pan, Élodie Puybareau, Rafael Rehwald, Ruisheng Su, Pengcheng Shi, Lorna Smith, Therese Tillin, Guillaume Tochon, Hélène Urien, Bas H. M. van der Velden, Isabelle F. van der Velpen, Benedikt Wiestler, Frank J. Wolters, Pinar Yilmaz, Marius de Groot, Meike W. Vernooij, Marleen de Bruijne

CoRR, 2022

2021

A global benchmark of algorithms for segmenting the left atrium from late gadolinium-enhanced cardiac magnetic resonance imaging.

Zhaohan Xiong, Qing Xia, Zhiqiang Hu, Ning Huang, Cheng Bian, Yefeng Zheng, Sulaiman Vesal, Nishant Ravikumar, Andreas K. Maier, Xin Yang, Pheng-Ann Heng, Dong Ni, Caizi Li, Qianqian Tong, Weixin Si, Élodie Puybareau, Younes Khoudli, Thierry Géraud, Jichao Zhao

Medical Image Anal., 2021

VerSe: A Vertebrae labelling and segmentation benchmark for multi-detector CT images.

Anjany Sekuboyina, Malek El Husseini, Amirhossein Bayat, Maximilian Löffler, Hans Liebl, Hongwei Li, Giles Tetteh, Jan Kukacka, Christian Payer, Darko Stern, Martin Urschler, Maodong Chen, Dalong Cheng, Nikolas Lessmann, Yujin Hu, Tianfu Wang, Dong Yang, Daguang Xu, Felix Ambellan, Tamaz Amiranashvili, Moritz Ehlke, Hans Lamecker, Sebastian Lehnert, Marilia Lirio, Nicolás Pérez de Olaguer, Heiko Ramm, Manish Sahu, Alexander Tack, Stefan Zachow, Tao Jiang, Xinjun Ma, Christoph Angerman, Xin Wang, Kevin Brown, Alexandre Kirszenberg, Élodie Puybareau, Di Chen, Yiwei Bai, Brandon H. Rapazzo, Timyoas Yeah, Amber Zhang, Shangliang Xu, Feng Hou, Zhiqiang He, Chan Zeng, Zheng Xiangshang, Xu Liming, Tucker J. Netherton, Raymond P. Mumme, Laurence E. Court, Zixun Huang, Chenhang He, Li-Wen Wang, Sai Ho Ling, Lê Duy Huynh, Nicolas Boutry, Roman Jakubícek, Jirí Chmelík, Supriti Mulay, Mohanasankar Sivaprakasam, Johannes C. Paetzold, Suprosanna Shit, Ivan Ezhov, Benedikt Wiestler, Ben Glocker, Alexander Valentinitsch, Markus Rempfler, Björn H. Menze, Jan S. Kirschke

Medical Image Anal., 2021

QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Metrics and Benchmarking Results.

Raghav Mehta, Angelos Filos, Ujjwal Baid, Chiharu Sako, Richard McKinley, Michael Rebsamen, Katrin Dätwyler, Raphael Meier, Piotr Radojewski, Gowtham Krishnan Murugesan, Sahil S. Nalawade, Chandan Ganesh, Benjamin C. Wagner, Fang F. Yu, Baowei Fei, Ananth J. Madhuranthakam, Joseph A. Maldjian, Laura Alexandra Daza, Catalina Gómez Caballero, Pablo Arbeláez, Chengliang Dai, Shuo Wang, Hadrien Raynaud, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai, Subhashis Banerjee, Linmin Pei, Murat Ak, Sarahi Rosas-González, Ilyess Zemmoura, Clovis Tauber, Minh H. Vu, Tufve Nyholm, Tommy Löfstedt, Laura Mora Ballestar, Verónica Vilaplana, Hugh McHugh, Gonzalo D. Maso Talou, Alan Wang, Jay B. Patel, Ken Chang, Katharina Hoebel, Mishka Gidwani, Nishanth Thumbavanam Arun, Sharut Gupta, Mehak Aggarwal, Praveer Singh, Elizabeth R. Gerstner, Jayashree Kalpathy-Cramer, Nicolas Boutry, Alexis Huard, Lasitha Vidyaratne, Md Monibor Rahman, Khan M. Iftekharuddin, Joseph Chazalon, Élodie Puybareau, Guillaume Tochon, Jun Ma, Mariano Cabezas, Xavier Lladó, Arnau Oliver, Liliana Valencia, Sergi Valverde, Mehdi Amian, Mohammadreza Soltaninejad, Andriy Myronenko, Ali Hatamizadeh, Xue Feng, Quan Dou, Nicholas J. Tustison, Craig H. Meyer, Nisarg A. Shah, Sanjay N. Talbar, Marc-André Weber, Abhishek Mahajan, András Jakab, Roland Wiest, Hassan M. Fathallah-Shaykh, Arash Nazeri, Mikhail Milchenko, Daniel S. Marcus, Aikaterini Kotrotsou, Rivka Colen, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Bjoern H. Menze, Spyridon Bakas, Yarin Gal, Tal Arbel

CoRR, 2021

Going Beyond p-convolutions to Learn Grayscale Morphological Operators.

Alexandre Kirszenberg, Guillaume Tochon, Élodie Puybareau, Jesús Angulo

Proceedings of the Discrete Geometry and Mathematical Morphology, 2021

On Some Associations Between Mathematical Morphology and Artificial Intelligence.

Isabelle Bloch, Samy Blusseau, Ramón Pino Pérez, Élodie Puybareau, Guillaume Tochon

Proceedings of the Discrete Geometry and Mathematical Morphology, 2021

2020

A Global Benchmark of Algorithms for Segmenting Late Gadolinium-Enhanced Cardiac Magnetic Resonance Imaging.

Zhaohan Xiong, Qing Xia, Zhiqiang Hu, Ning Huang, Cheng Bian, Yefeng Zheng, Sulaiman Vesal, Nishant Ravikumar, Andreas K. Maier, Xin Yang, Pheng-Ann Heng, Dong Ni, Caizi Li, Qianqian Tong, Weixin Si, Élodie Puybareau, Younes Khoudli, Thierry Géraud, Chen Chen, Wenjia Bai, Daniel Rueckert, Lingchao Xu, Xiahai Zhuang, Xinzhe Luo, Shuman Jia, Maxime Sermesant, Yashu Liu, Kuanquan Wang, Davide Borra, Alessandro Masci, Cristiana Corsi, Coen de Vente, Mitko Veta, Rashed Karim, Chandrakanth Jayachandran Preetha, Sandy Engelhardt, Mengyun Qiao, Yuanyuan Wang, Qian Tao, Marta Nuñez Garcia, Oscar Camara, Nicoló Savioli, Pablo Lamata, Jichao Zhao

CoRR, 2020

VerSe: A Vertebrae Labelling and Segmentation Benchmark.

Anjany Sekuboyina, Amirhossein Bayat, Malek El Husseini, Maximilian Löffler, Markus Rempfler, Jan Kukacka, Giles Tetteh, Alexander Valentinitsch, Christian Payer, Martin Urschler, Maodong Chen, Dalong Cheng, Nikolas Lessmann, Yujin Hu, Tianfu Wang, Dong Yang, Daguang Xu, Felix Ambellan, Stefan Zachow, Tao Jiang, Xinjun Ma, Christoph Angerman, Xin Wang, Qingyue Wei, Kevin Brown, Matthias Wolf, Alexandre Kirszenberg, Élodie Puybareau, Björn H. Menze, Jan S. Kirschke

CoRR, 2020

Stacked and Parallel U-Nets with Multi-output for Myocardial Pathology Segmentation.

Zhou Zhao, Nicolas Boutry, Élodie Puybareau

Proceedings of the Myocardial Pathology Segmentation Combining Multi-Sequence Cardiac Magnetic Resonance Images, 2020

Do not Treat Boundaries and Regions Differently: An Example on Heart Left Atrial Segmentation.

Zhou Zhao, Élodie Puybareau, Nicolas Boutry, Thierry Géraud

Proceedings of the 25th International Conference on Pattern Recognition, 2020

FOANet: A Focus of Attention Network with Application to Myocardium Segmentation.

Zhou Zhao, Élodie Puybareau, Nicolas Boutry, Thierry Géraud

Proceedings of the 25th International Conference on Pattern Recognition, 2020

2019

Benchmark on Automatic Six-Month-Old Infant Brain Segmentation Algorithms: The iSeg-2017 Challenge.

Li Wang, Dong Nie, Guannan Li, Élodie Puybareau, Jose Dolz, Qian Zhang, Fan Wang, Jing Xia, Zhengwang Wu, Jiawei Chen, Kim-Han Thung, Toan Duc Bui, Jitae Shin, Guodong Zeng, Guoyan Zheng, Vladimir S. Fonov, Andrew Doyle, Yongchao Xu, Pim Moeskops, Josien P. W. Pluim, Christian Desrosiers, Ismail Ben Ayed, Gerard Sanroma, Oualid M. Benkarim, Adrià Casamitjana, Verónica Vilaplana, Weili Lin, Gang Li, Dinggang Shen

IEEE Trans. Medical Imaging, 2019

Standardized Assessment of Automatic Segmentation of White Matter Hyperintensities and Results of the WMH Segmentation Challenge.

Hugo J. Kuijf, Adrià Casamitjana, D. Louis Collins, Mahsa Dadar, Achilleas Georgiou, Mohsen Ghafoorian, Dakai Jin, April Khademi, Jesse Knight, Hongwei Li, Xavier Lladó, J. Matthijs Biesbroek, Miguel Luna, Qaiser Mahmood, Richard McKinley, Alireza Mehrtash, Sébastien Ourselin, Bo-yong Park, Hyunjin Park, Sang Hyun Park, Simon Pezold, Élodie Puybareau, Jeroen de Bresser, Letícia Rittner, Carole H. Sudre, Sergi Valverde, Verónica Vilaplana, Roland Wiest, Yongchao Xu, Ziyue Xu, Guodong Zeng, Jianguo Zhang, Guoyan Zheng, Rutger Heinen, Christopher Chen, Wiesje M. van der Flier, Frederik Barkhof, Max A. Viergever, Geert Jan Biessels, Simon Andermatt, Mariana P. Bento, Matt Berseth, Mikhail Belyaev, M. Jorge Cardoso

IEEE Trans. Medical Imaging, 2019

High throughput automated detection of axial malformations in Medaka embryo.

Diane Genest, Élodie Puybareau, Marc Léonard, Jean Cousty, Noémie De Crozé, Hugues Talbot

Comput. Biol. Medicine, 2019

A Two-Stage Temporal-Like Fully Convolutional Network Framework for Left Ventricle Segmentation and Quantification on MR Images.

Zhou Zhao, Nicolas Boutry, Élodie Puybareau, Thierry Géraud

Proceedings of the Statistical Atlases and Computational Models of the Heart. Multi-Sequence CMR Segmentation, CRT-EPiggy and LV Full Quantification Challenges, 2019

Spherical Fluorescent Particle Segmentation and Tracking in 3D Confocal Microscopy.

Élodie Puybareau, Edwin Carlinet, Alessandro Benfenati, Hugues Talbot

Proceedings of the Mathematical Morphology and Its Applications to Signal and Image Processing, 2019

Two Stages CNN-Based Segmentation of Gliomas, Uncertainty Quantification and Prediction of Overall Patient Survival.

Thibault Buatois, Élodie Puybareau, Guillaume Tochon, Joseph Chazalon

Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2019

Using Separated Inputs for Multimodal Brain Tumor Segmentation with 3D U-Net-like Architectures.

Nicolas Boutry, Joseph Chazalon, Élodie Puybareau, Guillaume Tochon, Hugues Talbot, Thierry Géraud

Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2019

2018

The challenge of cerebral magnetic resonance imaging in neonates: A new method using mathematical morphology for the segmentation of structures including diffuse excessive high signal intensities.

Yongchao Xu, Baptiste Morel, Sonia Dahdouh, Élodie Puybareau, Alessio Virzi, Hélène Urien, Thierry Géraud, Catherine Adamsbaum, Isabelle Bloch

Medical Image Anal., 2018

Left Atrial Segmentation in a Few Seconds Using Fully Convolutional Network and Transfer Learning.

Élodie Puybareau, Zhou Zhao, Younes Khoudli, Edwin Carlinet, Yongchao Xu, Jérôme Lacotte, Thierry Géraud

Proceedings of the Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges, 2018

Segmentation of Gliomas and Prediction of Patient Overall Survival: A Simple and Fast Procedure.

Élodie Puybareau, Guillaume Tochon, Joseph Chazalon, Jonathan Fabrizio

Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2018

Real-Time Document Detection in Smartphone Videos.

Élodie Puybareau, Thierry Géraud

Proceedings of the 2018 IEEE International Conference on Image Processing, 2018

A First Step Toward a Fair Comparison of Evaluation Protocols for Text Detection Algorithms.

Aliona Dangla, Élodie Puybareau, Guillaume Tochon, Jonathan Fabrizio

Proceedings of the 13th IAPR International Workshop on Document Analysis Systems, 2018

2017

An automated assay for the assessment of cardiac arrest in fish embryo.

Élodie Puybareau, Diane Genest, Emilie Barbeau, Marc Léonard, Hugues Talbot

Comput. Biol. Medicine, 2017

White Matter Hyperintensities Segmentation in a Few Seconds Using Fully Convolutional Network and Transfer Learning.

Yongchao Xu, Thierry Géraud, Élodie Puybareau, Isabelle Bloch, Joseph Chazalon

Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2017

Morphological Analysis of Brownian Motion for Physical Measurements.

Élodie Puybareau, Hugues Talbot, Noha Gaber, Tarik Bourouina

Proceedings of the Mathematical Morphology and Its Applications to Signal and Image Processing, 2017

Periodic area-of-motion characterization for bio-medical applications.

Élodie Puybareau, Hugues Talbot, Laurent Najman

Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

2016

Motion analysis for Medical and Bio-medical applications. (Analyse du mouvement pour applications médicales et bio-médicales).

Élodie Puybareau

PhD thesis, 2016

Automating the measurement of physiological parameters: A case study in the image analysis of cilia motion.

Élodie Puybareau, Hugues Talbot, Emilie Bequignon, Bruno Louis, Gabriel Pelle, Jean-François Papon, André Coste, Laurent Najman

Proceedings of the 2016 IEEE International Conference on Image Processing, 2016

2015

An Automated Assay for the Evaluation of Mortality in Fish Embryo.

Élodie Puybareau, Marc Léonard, Hugues Talbot

Proceedings of the Mathematical Morphology and Its Applications to Signal and Image Processing, 2015

A regionalized automated measurement of ciliary beating frequency.

Élodie Puybareau, Hugues Talbot, Gabriel Pelle, Bruno Louis, Jean-François Papon, André Coste, Laurent Najman

Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Automated heart rate estimation in fish embryo.

Élodie Puybareau, Hugues Talbot, Marc Léonard

Proceedings of the 2015 International Conference on Image Processing Theory, 2015