Jasmijn A. Baaijens

According to our database, Jasmijn A. Baaijens authored at least 7 papers between 2016 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Amplidiff: an optimized amplicon sequencing approach to estimating lineage abundances in viral metagenomes.

Jasper van Bemmelen, Davida S. Smyth, Jasmijn A. Baaijens

BMC Bioinform., December, 2024

2022

Computational graph pangenomics: a tutorial on data structures and their applications.

Jasmijn A. Baaijens, Paola Bonizzoni, Christina Boucher, Gianluca Della Vedova, Yuri Pirola, Raffaella Rizzi, Jouni Sirén

Nat. Comput., 2022

2020

Strain-Aware Assembly of Genomes from Mixed Samples Using Flow Variation Graphs.

Jasmijn A. Baaijens, Leen Stougie, Alexander Schönhuth

Proceedings of the Research in Computational Molecular Biology, 2020

2019

12 Grand Challenges in Single-Cell Data Science.

David Laehnemann, Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson, Catalina A. Vallejos, Niko Beerenwinkel, Kieran R. Campbell, Ahmed Mahfouz, Luca Pinello, Pavel Skums, Alexandros Stamatakis, Camille Stephan-Otto Attolini, Samuel Aparicio, Jasmijn A. Baaijens, Marleen Balvert, Buys de Barbanson, Antonio Cappuccio, Giacomo Corleone, Bas E. Dutilh, Maria Florescu, Victor Guryev, Rens Holmer, Katharina Jahn, Thamar Jessurun Lobo, Emma M. Keizer, Indu Khatri, Szymon M. Kielbasa, Jan O. Korbel, Alexey M. Kozlov, Tzu-Hao Kuo, Boudewijn P. F. Lelieveldt, Ion I. Mandoiu, John C. Marioni, Tobias Marschall, Felix Mölder, Amir Niknejad, Lukasz Raczkowski, Marcel J. T. Reinders, Jeroen de Ridder, Antoine-Emmanuel Saliba, Antonios Somarakis, Oliver Stegle, Fabian J. Theis, Huan Yang, Alex Zelikovsky, Alice C. McHardy, Benjamin J. Raphael, Sohrab P. Shah, Alexander Schönhuth

PeerJ Prepr., 2019

Overlap graph-based generation of haplotigs for diploids and polyploids.

Jasmijn A. Baaijens, Alexander Schönhuth

Bioinform., 2019

Full-length de novo viral quasispecies assembly through variation graph construction.

Jasmijn A. Baaijens, Bastiaan Van der Roest, Johannes Köster, Leen Stougie, Alexander Schönhuth

Bioinform., 2019

2016

On the Existence of Identifiable Reparametrizations for Linear Compartment Models.

Jasmijn A. Baaijens, Jan Draisma

SIAM J. Appl. Math., 2016