Jörg Stelling

According to our database1, Jörg Stelling authored at least 36 papers between 2003 and 2022.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.



In proceedings 
PhD thesis 


On csauthors.net:


PolyRound: polytope rounding for random sampling in metabolic networks.
Bioinform., 2022

Probabilistic thermodynamic analysis of metabolic networks.
Bioinform., 2021

Population Design for Synthetic Gene Circuits.
Proceedings of the Computational Methods in Systems Biology, 2021

Microbial Community Decision Making Models in Batch and Chemostat Cultures.
Proceedings of the Computational Methods in Systems Biology, 2021

TopoFilter: a MATLAB package for mechanistic model identification in systems biology.
BMC Bioinform., 2020

BioSwitch: a tool for the detection of bistability and multi-steady state behaviour in signalling and gene regulatory networks.
Bioinform., 2020

Chemical Reaction Network Theory elucidates sources of multistability in interferon signaling.
PLoS Comput. Biol., 2017

Modular Parameter Identification of Biomolecular Networks.
SIAM J. Sci. Comput., 2016

Efficient Reconstruction of Predictive Consensus Metabolic Network Models.
PLoS Comput. Biol., 2016

Deterministic Description of Biochemical Networks.
Proceedings of the Encyclopedia of Systems and Control, 2015

Efficient Characterization of Parametric Uncertainty of Complex (Bio)chemical Networks.
PLoS Comput. Biol., 2015

A method for inverse bifurcation of biochemical switches: inferring parameters from dose response curves.
BMC Syst. Biol., 2014

Topological augmentation to infer hidden processes in biological systems.
Bioinform., 2014

Accurate cell segmentation in microscopy images using membrane patterns.
Bioinform., 2014

Modular, rule-based modeling for the design of eukaryotic synthetic gene circuits.
BMC Syst. Biol., 2013

MetaNetX.org: a website and repository for accessing, analysing and manipulating metabolic networks.
Bioinform., 2013

Near-optimal experimental design for model selection in systems biology.
Bioinform., 2013

System-Level Insights into Yeast Metabolism by Thermodynamic Analysis of Elementary Flux Modes.
PLoS Comput. Biol., 2012

A specialized ODE integrator for the efficient computation of parameter sensitivities.
BMC Syst. Biol., 2012

Automatic Design of Digital Synthetic Gene Circuits.
PLoS Comput. Biol., 2011

Efficient characterization of high-dimensional parameter spaces for systems biology.
BMC Syst. Biol., 2011

Graph-Based Decomposition of Biochemical Reaction Networks into Monotone Subsystems.
Proceedings of the Algorithms in Bioinformatics - 11th International Workshop, 2011

Automatic Control in Systems Biology.
Proceedings of the Springer Handbook of Automation, 2009

Precise Regulation of Gene Expression Dynamics Favors Complex Promoter Architectures.
PLoS Comput. Biol., 2009

Parallel Extreme Ray and Pathway Computation.
Proceedings of the Parallel Processing and Applied Mathematics, 2009

Synthetic Gene Network Computational Design.
Proceedings of the International Symposium on Circuits and Systems (ISCAS 2009), 2009

Circadian Phase Resetting via Single and Multiple Control Targets.
PLoS Comput. Biol., 2008

Large-scale computation of elementary flux modes with bit pattern trees.
Bioinform., 2008

Computational design of synthetic gene circuits with composable parts.
Bioinform., 2008

Elementary flux modes - state-of-the-art implementation and scope of application.
BMC Syst. Biol., 2007

Quantitative performance metrics for robustness in circadian rhythms.
Bioinform., 2007

Accelerating the Computation of Elementary Modes Using Pattern Trees.
Proceedings of the Algorithms in Bioinformatics, 6th International Workshop, 2006

Sensitivity analysis of oscillatory (bio)chemical systems.
Comput. Chem. Eng., 2005

FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps.
Bioinform., 2003

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models.
Bioinform., 2003

Making predictions about robustness and flexibility from metabolic network structure.
Proceedings of the German Conference on Bioinformatics, 2003