Özlem Uzuner
Orcid: 0000-0001-8011-9850Affiliations:
- State University of New York at Albany, NY, USA
- MIT Computer Science and Artificial Intelligence Laboratory (CSAIL), Cambridge, MA, USA
According to our database1,
Özlem Uzuner
authored at least 143 papers
between 1999 and 2024.
Collaborative distances:
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Online presence:
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on albany.edu
On csauthors.net:
Bibliography
2024
A Novel Corpus of Annotated Medical Imaging Reports and Information Extraction Results Using BERT-based Language Models.
CoRR, 2024
MasonTigers at SemEval-2024 Task 8: Performance Analysis of Transformer-based Models on Machine-Generated Text Detection.
CoRR, 2024
2023
J. Am. Medical Informatics Assoc., November, 2023
Overview of the 2022 n2c2 shared task on contextualized medication event extraction in clinical notes.
J. Biomed. Informatics, August, 2023
J. Am. Medical Informatics Assoc., July, 2023
Advancements in extracting social determinants of health information from narrative text.
J. Am. Medical Informatics Assoc., July, 2023
Leveraging natural language processing to augment structured social determinants of health data in the electronic health record.
J. Am. Medical Informatics Assoc., July, 2023
Progress Note Understanding - Assessment and Plan Reasoning: Overview of the 2022 N2C2 Track 3 shared task.
J. Biomed. Informatics, June, 2023
Extracting medication changes in clinical narratives using pre-trained language models.
J. Biomed. Informatics, March, 2023
Progress Note Understanding - Assessment and Plan Reasoning: Overview of the 2022 N2C2 Track 3 Shared Task.
CoRR, 2023
MasonNLP+ at SemEval-2023 Task 8: Extracting Medical Questions, Experiences and Claims from Social Media using Knowledge-Augmented Pre-trained Language Models.
Proceedings of the The 17th International Workshop on Semantic Evaluation, 2023
MASON-NLP at eRisk 2023: Deep Learning-Based Detection of Depression Symptoms from Social Media Texts.
Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), 2023
Proceedings of the 5th Clinical Natural Language Processing Workshop, 2023
2022
Investigating the Effect of Preprocessing Arabic Text on Offensive Language and Hate Speech Detection.
ACM Trans. Asian Low Resour. Lang. Inf. Process., 2022
Call for papers: Special issue on clinical natural language processing for secondary use applications.
J. Biomed. Informatics, 2022
A scoping review of publicly available language tasks in clinical natural language processing.
J. Am. Medical Informatics Assoc., 2022
The Leaf Clinical Trials Corpus: a new resource for query generation from clinical trial eligibility criteria.
CoRR, 2022
Fine-Tuning Approach for Arabic Offensive Language Detection System: BERT-Based Model.
CoRR, 2022
Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers.
Database J. Biol. Databases Curation, 2022
Proceedings of the International Conference on Asian Language Processing, 2022
A Corpus of Radiology Reports From Multiple Imaging Modalities With Fine-grained Event-based Annotations.
Proceedings of the AMIA 2022, 2022
2021
ACM Trans. Asian Low Resour. Lang. Inf. Process., 2021
IEEE Syst. J., 2021
J. Am. Medical Informatics Assoc., 2021
J. Am. Medical Informatics Assoc., 2021
Corrigendum to: The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records.
J. Am. Medical Informatics Assoc., 2021
Extracting Radiological Findings With Normalized Anatomical Information Using a Span-Based BERT Relation Extraction Model.
CoRR, 2021
Transfer Learning Approach for Arabic Offensive Language Detection System - BERT-Based Model.
CoRR, 2021
Proceedings of the Sixth Arabic Natural Language Processing Workshop, 2021
Proceedings of the 12th IEEE Annual Ubiquitous Computing, 2021
BERT Model for Fake News Detection Based on Social Bot Activities in the COVID-19 Pandemic.
Proceedings of the 12th IEEE Annual Ubiquitous Computing, 2021
Proceedings of the 15th International Workshop on Semantic Evaluation, 2021
Proceedings of the 2021 SIAM International Conference on Data Mining, 2021
Evaluating the Relevance of UMLS Knowledge Base for Public Health Informatics during Disasters.
Proceedings of the 18th International Conference on Information Systems for Crisis Response and Management, 2021
Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2021, 2021
Proceedings of the 20th Workshop on Biomedical Language Processing, 2021
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
Proceedings of the IEEE World AI IoT Congress, 2021
Proceedings of the IEEE World AI IoT Congress, 2021
2020
J. Biomed. Informatics, 2020
Advancing the state of the art in automatic extraction of adverse drug events from narratives.
J. Am. Medical Informatics Assoc., 2020
The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records.
J. Am. Medical Informatics Assoc., 2020
2018 n2c2 shared task on adverse drug events and medication extraction in electronic health records.
J. Am. Medical Informatics Assoc., 2020
SalamNET at SemEval-2020 Task12: Deep Learning Approach for Arabic Offensive Language Detection.
CoRR, 2020
Proceedings of the Fifth Social Media Mining for Health Applications Workshop & Shared Task, 2020
SalamNET at SemEval-2020 Task 12: Deep Learning Approach for Arabic Offensive Language Detection.
Proceedings of the Fourteenth Workshop on Semantic Evaluation, 2020
A Multi-channel BiLSTM-CNN Model for Multilabel Emotion Classification of Informal Text.
Proceedings of the IEEE 14th International Conference on Semantic Computing, 2020
Deep Contextualized Word Embedding for Text-based Online User Profiling to Detect Social Bots on Twitter.
Proceedings of the 20th International Conference on Data Mining Workshops, 2020
Proceedings of the AMIA 2020, 2020
Proceedings of the AMIA 2020, 2020
Jointly Learning Clinical Entities and Relations with Contextual Language Models and Explicit Context.
Proceedings of the AMIA 2020, 2020
2019
Editorial: The second international workshop on health natural language processing (HealthNLP 2019).
BMC Medical Informatics Decis. Mak., 2019
J. Am. Medical Informatics Assoc., 2019
Extraction and Analysis of Clinically Important Follow-up Recommendations in a Large Radiology Dataset.
CoRR, 2019
Proceedings of the Fourth Social Media Mining for Health Application Workshop & Shared Task, 2019
An Exploratory Study on Pseudo-Data Generation in Prescription and Adverse Drug Reaction Extraction.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019
An Empirical Test of GRUs and Deep Contextualized Word Representations on De-Identification.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019
Proceedings of the AMIA 2019, 2019
2018
Corrigendum to "Symptom severity prediction from neuropsychiatric clinical records: Overview of 2016 CEGS N-GRID shared tasks Track 2" [J Biomed Inform. 2017 Nov;75S: S62-S70].
J. Biomed. Informatics, 2018
Segment convolutional neural networks (Seg-CNNs) for classifying relations in clinical notes.
J. Am. Medical Informatics Assoc., 2018
Proceedings of the AMIA 2018, 2018
Proceedings of the AMIA 2018, 2018
Proceedings of the AMIA 2018, 2018
Proceedings of the AMIA 2018, 2018
2017
J. Biomed. Informatics, 2017
J. Am. Medical Informatics Assoc., 2017
Bridging semantics and syntax with graph algorithms - state-of-the-art of extracting biomedical relations.
Briefings Bioinform., 2017
A Hybrid Approach to Precision Medicine-related Biomedical Article Retrieval and Clinical Trial Matching.
Proceedings of The Twenty-Sixth Text REtrieval Conference, 2017
Proceedings of the 2017 Text Analysis Conference, 2017
2016
Do Sentiments Matter in Fraud Detection? Estimating Semantic Orientation of Annual Reports.
Intell. Syst. Account. Finance Manag., 2016
Natural Language Processing Working Group Pre-Symposium: Graduate Student Consortium and 'Hackathon'.
Proceedings of the AMIA 2016, 2016
Proceedings of the Clinical Natural Language Processing Workshop, 2016
2015
Ease of adoption of clinical natural language processing software: An evaluation of five systems.
J. Biomed. Informatics, 2015
Practical applications for natural language processing in clinical research: The 2014 i2b2/UTHealth shared tasks.
J. Biomed. Informatics, 2015
Annotating risk factors for heart disease in clinical narratives for diabetic patients.
J. Biomed. Informatics, 2015
Annotating longitudinal clinical narratives for de-identification: The 2014 i2b2/UTHealth corpus.
J. Biomed. Informatics, 2015
Identifying risk factors for heart disease over time: Overview of 2014 i2b2/UTHealth shared task Track 2.
J. Biomed. Informatics, 2015
Automated systems for the de-identification of longitudinal clinical narratives: Overview of 2014 i2b2/UTHealth shared task Track 1.
J. Biomed. Informatics, 2015
J. Biomed. Informatics, 2015
A systematic comparison of feature space effects on disease classifier performance for phenotype identification of five diseases.
J. Biomed. Informatics, 2015
Normalization of relative and incomplete temporal expressions in clinical narratives.
J. Am. Medical Informatics Assoc., 2015
Subgraph augmented non-negative tensor factorization (SANTF) for modeling clinical narrative text.
J. Am. Medical Informatics Assoc., 2015
Understanding Citizens' Direct Policy Suggestions to the Federal Government: A Natural Language Processing and Topic Modeling Approach.
Proceedings of the 48th Hawaii International Conference on System Sciences, 2015
Introducing textual analysis tools for policy informatics: a case study of e-petitions.
Proceedings of the 16th Annual International Conference on Digital Government Research, 2015
Proceedings of the AMIA 2015, 2015
Proceedings of the Medical Data Privacy Handbook, 2015
2014
Research and applications: Word sense disambiguation in the clinical domain: a comparison of knowledge-rich and knowledge-poor unsupervised methods.
J. Am. Medical Informatics Assoc., 2014
2013
Chronology of your health events: Approaches to extracting temporal relations from medical narratives.
J. Biomed. Informatics, 2013
J. Am. Medical Informatics Assoc., 2013
J. Am. Medical Informatics Assoc., 2013
Proceedings of the Working Notes for CLEF 2013 Conference , 2013
2012
Evaluating the state of the art in coreference resolution for electronic medical records.
J. Am. Medical Informatics Assoc., 2012
J. Am. Medical Informatics Assoc., 2012
Supporters in Deed - Studying Online Support Provision from the Perspective of Social Capital.
Proceedings of the International Conference on Information Systems, 2012
Proceedings of the AMIA 2012, 2012
Proceedings of the AMIA 2012, 2012
2011
J. Am. Medical Informatics Assoc., 2011
Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions.
J. Am. Medical Informatics Assoc., 2011
A cascade of classifiers for extracting medication information from discharge summaries.
J. Biomed. Semant., 2011
2010
Community annotation experiment for ground truth generation for the i2b2 medication challenge.
J. Am. Medical Informatics Assoc., 2010
J. Am. Medical Informatics Assoc., 2010
Artif. Intell. Medicine, 2010
Informational Support or Emotional Support: Preliminary Study of an Automated Approach to Analyze Online Support Community Contents.
Proceedings of the International Conference on Information Systems, 2010
Proceedings of the Workshop on Negation and Speculation in Natural Language Processing, 2010
Proceedings of the Second Louhi Workshop on Text and Data Mining of Health Documents, 2010
2009
J. Biomed. Informatics, 2009
Research Paper: Machine Learning and Rule-based Approaches to Assertion Classification.
J. Am. Medical Informatics Assoc., 2009
J. Am. Medical Informatics Assoc., 2009
Proceedings of the 24th International Symposium on Computer and Information Sciences, 2009
2008
J. Am. Medical Informatics Assoc., 2008
J. Am. Medical Informatics Assoc., 2008
2007
J. Am. Medical Informatics Assoc., 2007
Proceedings of the AMIA 2007, 2007
2006
Stylistics for text retrieval in practice: SIGIR 2006 workshop, Seattle, August 10, 2006.
SIGIR Forum, 2006
Proceedings of the Fifteenth Text REtrieval Conference, 2006
Proceedings of the Security, Steganography, and Watermarking of Multimedia Contents VIII, 2006
Role of Local Context in Automatic Deidentification of Ungrammatical, Fragmented Text.
Proceedings of the Human Language Technology Conference of the North American Chapter of the Association of Computational Linguistics, 2006
Proceedings of the AMIA 2006, 2006
2005
Proceedings of the Fourteenth Text REtrieval Conference, 2005
Proceedings of the Natural Language Processing, 2005
Lexical Chains and Sliding Locality Windows in Content-based Text Similarity Detection.
Proceedings of the Natural Language Processing - IJCNLP 2005, Second International Joint Conference, Jeju Island, Republic of Korea, October 11-13, 2005, 2005
Proceedings of the Proceedings, 2005
2004
Proceedings of the Thirteenth Text REtrieval Conference, 2004
Proceedings of the 37th Hawaii International Conference on System Sciences (HICSS-37 2004), 2004
2003
Proceedings of the 2003 ACM workshop on Digital rights management 2003, Washington, 2003
Proceedings of the 2003 Annual National Conference on Digital Government Research, 2003
Proceedings of the 2003 Annual National Conference on Digital Government Research, 2003
2001
Proceedings of the 34th Annual Hawaii International Conference on System Sciences (HICSS-34), 2001
1999
Proceedings of the Sixteenth National Conference on Artificial Intelligence and Eleventh Conference on Innovative Applications of Artificial Intelligence, 1999