Lynette Hirschman

According to our database1, Lynette Hirschman authored at least 137 papers between 1975 and 2016.

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Bibliography

2016
Optimizing annotation resources for natural language de-identification via a game theoretic framework.
Journal of Biomedical Informatics, 2016

Overview of the interactive task in BioCreative V.
Database, 2016

Crowdsourcing and curation: perspectives from biology and natural language processing.
Database, 2016

2015
Summary of the BioLINK SIG 2013 meeting at ISMB/ECCB 2013.
Bioinformatics, 2015

Scaling drug indication curation through crowdsourcing.
Database, 2015

2014
De-identification of clinical narratives through writing complexity measures.
I. J. Medical Informatics, 2014

Hybrid curation of gene-mutation relations combining automated extraction and crowdsourcing.
Database, 2014

BioCreative-IV virtual issue.
Database, 2014

2013
Hiding in plain sight: use of realistic surrogates to reduce exposure of protected health information in clinical text.
JAMIA, 2013

Bootstrapping a de-identification system for narrative patient records: Cost-performance tradeoffs.
I. J. Medical Informatics, 2013

2012
BioCreative-2012 Virtual Issue.
Database, 2012

Biocuration workflows and text mining: overview of the BioCreative 2012 Workshop Track II.
Database, 2012

Text mining for the biocuration workflow.
Database, 2012

Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference.
Database, 2012

Validating Candidate Gene-Mutation Relations in MEDLINE Abstracts via Crowdsourcing.
Proceedings of the Data Integration in the Life Sciences - 8th International Conference, 2012

2011
Nephele: genotyping via complete composition vectors and MapReduce.
Source Code for Biology and Medicine, 2011

MITRE system for clinical assertion status classification.
JAMIA, 2011

Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions.
JAMIA, 2011

BioCreative III interactive task: an overview.
BMC Bioinformatics, 2011

Overview of the BioCreative III Workshop.
BMC Bioinformatics, 2011

2010
An Overview of BioCreative II.5.
IEEE/ACM Trans. Comput. Biology Bioinform., 2010

Effects of personal identifier resynthesis on clinical text de-identification.
JAMIA, 2010

The MITRE Identification Scrubber Toolkit: Design, training, and assessment.
I. J. Medical Informatics, 2010

Genomic Standards Consortium Workshop: Metagenomics, Metadata and Metaanalysis (M3).
Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

Measuring Risk and Information Preservation: Toward New Metrics for De-identification of Clinical Texts.
Proceedings of the Second Louhi Workshop on Text and Data Mining of Health Documents, 2010

2009
Text mining and manual curation of chemical-gene-disease networks for the Comparative Toxicogenomics Database (CTD).
BMC Bioinformatics, 2009

2008
Session Introduction.
Proceedings of the Biocomputing 2008, 2008

Overview of the Ninth Annual Meeting of the BioLINK SIG at ISMB: Linking Literature, Information and Knowledge for Biology.
Proceedings of the Linking Literature, Information, and Knowledge for Biology, 2008

iProLINK: A Framework for Linking Text Mining with Ontology and Systems Biology.
Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine, 2008

2007
Editorial: Principles of Evaluation in Natural Language Processing.
TAL, 2007

Research Paper: Rapidly Retargetable Approaches to De-identification in Medical Records.
JAMIA, 2007

Evaluating the Automatic Mapping of Human Gene and Protein Mentions to Unique Identifiers.
Proceedings of the Biocomputing 2007, 2007

2006
Reading comprehension tests for computer-based understanding evaluation.
Natural Language Engineering, 2006

Session Introduction.
Proceedings of the Biocomputing 2006, 2006

2005
BioCreAtIvE Task 1A: gene mention finding evaluation.
BMC Bioinformatics, 2005

Overview of BioCreAtIvE: critical assessment of information extraction for biology.
BMC Bioinformatics, 2005

Overview of BioCreAtIvE task 1B: normalized gene lists.
BMC Bioinformatics, 2005

Data preparation and interannotator agreement: BioCreAtIvE Task 1B.
BMC Bioinformatics, 2005

Do you do text?
Bioinformatics, 2005

Evaluating Semantic Evaluations: How RTE Measures Up.
Proceedings of the Machine Learning Challenges, 2005

2004
Gene name identification and normalization using a model organism database.
Journal of Biomedical Informatics, 2004

MiTAP for SARS Detection.
Proceedings of the Demonstration Papers at HLT-NAACL 2004, 2004

Mining Online Media for Global Disease Outbreak Monitoring.
Proceedings of the Discrete Methods in Epidemiology, 2004

2003
Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup
CoRR, 2003

Linking Biomedical Language, Information and Knowledge - Session Introduction.
Proceedings of the 8th Pacific Symposium on Biocomputing, 2003

Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup.
Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29, 2003

Gene Name Extraction Using FlyBase Resources.
Proceedings of the Workshop on Natural Language Processing in Biomedicine, 2003

2002
Background and Overview for KDD Cup 2002 Task 1: Information Extraction from Biomedical Articles.
SIGKDD Explorations, 2002

SUMMAC: a text summarization evaluation.
Natural Language Engineering, 2002

Rutabaga by any other name: extracting biological names.
Journal of Biomedical Informatics, 2002

Accomplishments and challenges in literature data mining for biology.
Bioinformatics, 2002

Information extraction in molecular biology.
Briefings in Bioinformatics, 2002

MiTAP for Biosecurity: A Case Study.
AI Magazine, 2002

Literature Data Mining for Biology - Session Introduction.
Proceedings of the 7th Pacific Symposium on Biocomputing, 2002

MiTAP, Text and Audio Processing for Bio-Security: A Case Study.
Proceedings of the Eighteenth National Conference on Artificial Intelligence and Fourteenth Conference on Innovative Applications of Artificial Intelligence, July 28, 2002

2001
Natural language question answering: the view from here.
Natural Language Engineering, 2001

Comparing Several Aspects of Human-Computer and Human-Human Dialogues.
Proceedings of the SIGDIAL 2001 Workshop, 2001

Integrated Feasibility Experiment for Bio-Security: IFE-Bio, A TIDES Demonstration.
Proceedings of the First International Conference on Human Language Technology Research, 2001

Finding Errors Automatically in Semantically Tagged Dialogues.
Proceedings of the First International Conference on Human Language Technology Research, 2001


2000
How to Evaluate your Question Answering System Every Day and Still Get Real Work Done
CoRR, 2000

Evaluation for Darpa Communicator Spoken Dialogue Systems.
Proceedings of the Second International Conference on Language Resources and Evaluation, 2000

Evaluating Multi-party Multi-modal Systems.
Proceedings of the Second International Conference on Language Resources and Evaluation, 2000

How to Evaluate Your Question Answering System Every Day ... and Still Get Real Work Done.
Proceedings of the Second International Conference on Language Resources and Evaluation, 2000

Scenario-based evaluation of loosely-integrated collaborative systems.
Proceedings of the CHI '00 Extended Abstracts on Human Factors in Computing Systems, 2000

1999
The MITRE Map Navigation Experiment.
ACM Comput. Surv., 1999

Evaluation for Collaborative Systems.
ACM Comput. Surv., 1999

The Tipster Summac Text Summarization Evaluation.
Proceedings of the EACL 1999, 1999

Deep Read: A Reading Comprehension System.
Proceedings of the 27th Annual Meeting of the Association for Computational Linguistics, 1999

1998
The Evolution of evaluation: Lessons from the Message Understanding Conferences.
Computer Speech & Language, 1998

Automating Coreference: The Role of Annotated Training Data
CoRR, 1998

Appendix F: MUC-7 Coreference Task Definition (version 3.0).
Proceedings of the Seventh Message Understanding Conference: Proceedings of a Conference Held in Fairfax, 1998

Named Entity Scoring for Speech Input.
Proceedings of the 36th Annual Meeting of the Association for Computational Linguistics and 17th International Conference on Computational Linguistics, 1998

1997
Mixed-Initiative Development of Language Processing Systems.
Proceedings of the 5th Applied Natural Language Processing Conference, 1997

1996
MITRE: Description of the Alembic System as used in MET.
Proceedings of the TIPSTER TEXT PROGRAM PHASE II: Proceedings of a Workshop held at Vienna, 1996

1995
The challenge of spoken language systems: research directions for the nineties.
IEEE Trans. Speech and Audio Processing, 1995

A model-theoretic coreference scoring scheme.
Proceedings of the 6th Conference on Message Understanding, 1995

MITRE: description of the Alembic system used for MUC-6.
Proceedings of the 6th Conference on Message Understanding, 1995

Case study: fishing for information on the Internet.
Proceedings of the IEEE Symposium On Information Visualization 1995, 1995

1994
Session 3: Human Language Evaluation.
Proceedings of the Human Language Technology, 1994

Integrating Natural Language With Large Dataspace Visualization.
Proceedings of the Digital Libraries: Current Issues, 1994

1993
Report on Workshop on High Performance Computing and Communications for Grand Challenge Applications: Computer Vision, Speech and Natural Language Processing, and Artificial Intelligence.
IEEE Trans. Knowl. Data Eng., 1993

Evaluating Message Understanding Systems: An Analysis of the Third Message Understanding Conference (MUC-3).
Computational Linguistics, 1993

Spoken Language Recognition and Understanding.
Proceedings of the Human Language Technology: Proceedings of a Workshop Held at Plainsboro, 1993

Multi-Site Data Collection and Evaluation in Spoken Language Understanding.
Proceedings of the Human Language Technology: Proceedings of a Workshop Held at Plainsboro, 1993

The cost of errors in a spoken language system.
Proceedings of the Third European Conference on Speech Communication and Technology, 1993

1992
Spoken Language Recognition and Understanding.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Harriman, 1992

T]he MIT ATIS System: February 1992 Progress Report.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Harriman, 1992

Subject-Based Evaluation Measures for Interactive Spoken Language Systems.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Harriman, 1992

Experiments in Evaluating Interactive Spoken Language Systems.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Harriman, 1992

Multi-Site Data Collection for a Spoken Language Corpus.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Harriman, 1992

An adjunct test for discourse processing in MUC-4.
Proceedings of the 4th Conference on Message Understanding, 1992

Analysis of the effectiveness of system error messages in a human-machine travel planning task.
Proceedings of the Second International Conference on Spoken Language Processing, 1992

Multi-site data collection for a spoken language corpus - MAD COW.
Proceedings of the Second International Conference on Spoken Language Processing, 1992

Evaluating interactive spoken language systems.
Proceedings of the Second International Conference on Spoken Language Processing, 1992

1991
Spoken language systems for human/machine interfaces.
Proceedings of the Computer-Assisted Information Retrieval (Recherche d'Information et ses Applications) - RIAO 1991, 3rd International Conference, Universitad Autonoma de Barcelona, Spain, April 2, 1991

Spoken Language Recognition and Understanding.
Proceedings of the Speech and Natural Language, 1991

Interactive Problem Solving and Dialogue in the ATIS Domain.
Proceedings of the Speech and Natural Language, 1991

Development and Preliminary Evaluation of the MIT ATIS System.
Proceedings of the Speech and Natural Language, 1991

Integrating Syntax and Semantics into Spoken Language Understanding.
Proceedings of the Speech and Natural Language, 1991

Comparing MUCK-II and MUC-3: assessing the difficulty of different tasks.
Proceedings of the 3rd Conference on Message Understanding, 1991

The MIT ATIS system; preliminary development, spontaneous speech data collection, and performance evaluation.
Proceedings of the Second European Conference on Speech Communication and Technology, 1991

Full integration of speech and language understanding in the MIT spoken language system.
Proceedings of the Second European Conference on Speech Communication and Technology, 1991

Automated Pruning for a General Lexicon and Grammar.
Proceedings of the 29th Annual Meeting of the Association for Computational Linguistics, 1991

1990
From Speech Recognition to Spoken Language Understanding.
Proceedings of the Advances in Neural Information Processing Systems 3, 1990

Management and Evaluation of Interactive Dialog in the Air Travel Domain.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Hidden Valley, 1990

Beyond Class A: A Proposal for Automatic Evaluation of Discourse.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Hidden Valley, 1990

Project Summary: Linguistic Knowledge Sources for Spoken Language Understanding.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Hidden Valley, 1990

Session 3: Natural Language Evaluation.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Hidden Valley, 1990

Training and Evaluation of a Spoken Language Understanding System.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Hidden Valley, 1990

1989
Overview of the DARPA Speech and Natural Language Workshop.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Philadelphia, 1989

Natural Language Understanding: Integrating Syntaz, Semantics, and Discourse.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Philadelphia, 1989

Porting Pundit to the Resource Management Domain.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Philadelphia, 1989

Report on Session I: Prosodic Aids to Speech Recognition.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Cape Cod, 1989

Answers and Questions: Processing Messages and Queries.
Proceedings of the Speech and Natural Language: Proceedings of a Workshop Held at Cape Cod, 1989

1988
A Meta-Rule Treatment for Englich Wh-Constructions.
META, 1988

OR-Parallel Speed-Up in Natural Language Processing: A Case Study.
Proceedings of the Logic Programming, 1988

Improved Portability And Parsing Through Interactive Acquisition Of Semantic Information.
Proceedings of the 2nd Applied Natural Language Processing Conference, 1988

Sentence Fragments Regular Structures.
Proceedings of the 26th Annual Meeting of the Association for Computational Linguistics, 1988

1987
A Dynamic Translator for Rule Pruning in Restriction Grammar.
Natural Language Understanding and Logic Programming Workshop, 1987

1986
Conjunction in Meta-Restriction Grammar.
J. Log. Program., 1986

Discovery Procedures for Sublanguage Selectional Patterns: Initial Experiments.
Computational Linguistics, 1986

Recovering Implicit Information.
Proceedings of the Strategic Computing, 1986

PROTEUS and PUNDIT: Research in Text Understanding.
Proceedings of the Strategic Computing, 1986

Recovering Implicit Information.
Proceedings of the 24th Annual Meeting of the Association for Computational Linguistics, 1986

1985
A Predicate Connection Graph Based Logic with Flexible Control.
Proceedings of the 9th International Joint Conference on Artificial Intelligence. Los Angeles, 1985

1984
Automated Determination Of Sublanguage Syntactic Usage.
Proceedings of the 10th International Conference on Computational Linguistics and 22nd Annual Meeting of the Association for Computational Linguistics, 1984

1983
Isolating Domain Dependencies In Natural Language Interfaces.
Proceedings of the 1st Applied Natural Language Processing Conference, 1983

1982
Restriction Grammar in Prolog.
Proceedings of the First International Logic Programming Conference, 1982

Constraints On Noun Phrase Conjunction: A Domain-Independent Mechanism.
Proceedings of the 9th International Conference on Computational Linguistics, 1982

Natural Language Interfaces Using Limited Semantic Information.
Proceedings of the 9th International Conference on Computational Linguistics, 1982

1981
Representing Implicit And Explicit Time Relations In Narrative.
Proceedings of the 7th International Joint Conference on Artificial Intelligence, 1981

1980
Retrieving Time Information From Natural-Language Texts.
Proceedings of the Information Retrieval Research, 1980

1978
Question Answering from Natural Language Medical Data Bases.
Artif. Intell., 1978

1977
Transforming medical records into a structured data base.
SIGART Newsletter, 1977

1976
From text to structured information: automatic processing of medical reports.
Proceedings of the American Federation of Information Processing Societies: 1976 National Computer Conference, 1976

1975
Grammatically-based automatic word class formation.
Inf. Process. Manage., 1975


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