Avner Schlessinger

According to our database, Avner Schlessinger authored at least 14 papers between 2006 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Structural signatures: a web server for exploring a database of and generating protein structural features from human cell lines and tissues.

Nicole Zatorski, David Stein, Rayees Rahman, Ravi Iyengar, Avner Schlessinger

Database J. Biol. Databases Curation, 2022

2021

Crowdsourced identification of multi-target kinase inhibitors for RET- and TAU- based disease: The Multi-Targeting Drug DREAM Challenge.

Zhaoping Xiong, Minji Jeon, Robert J. Allaway, Jaewoo Kang, Donghyeon Park, Jinhyuk Lee, Hwisang Jeon, Miyoung Ko, Hualiang Jiang, Mingyue Zheng, Aik Choon Tan, Xindi Guo, Multi-Targeting Drug DREAM Challenge Community, Kristen K. Dang, Alex Tropsha, Chana Hecht, Tirtha K. Das, Heather A. Carlson, Ruben Abagyan, Justin Guinney, Avner Schlessinger, Ross L. Cagan

PLoS Comput. Biol., 2021

PredictProtein - Predicting Protein Structure and Function for 29 Years.

Michael Bernhofer, Christian Dallago, Timothy Karl, Venkata P. Satagopam, Michael Heinzinger, Maria Littmann, Tobias Olenyi, Jiajun Qiu, Konstantin Schütze, Guy Yachdav, Haim Ashkenazy, Nir Ben-Tal, Yana Bromberg, Tatyana Goldberg, László Kaján, Seán I. O'Donoghue, Chris Sander, Andrea Schafferhans, Avner Schlessinger, Gerrit Vriend, Milot Mirdita, Piotr Gawron, Wei Gu, Yohan Jarosz, Christophe Trefois, Martin Steinegger, Reinhard Schneider, Burkhard Rost

Nucleic Acids Res., 2021

2019

Integrated computational and Drosophila cancer model platform captures previously unappreciated chemicals perturbing a kinase network.

Peter M. U. Ung, Masahiro Sonoshita, Alex P. Scopton, Arvin C. Dar, Ross L. Cagan, Avner Schlessinger

PLoS Comput. Biol., 2019

KinaMetrix: a web resource to investigate kinase conformations and inhibitor space.

Rayees Rahman, Peter Man-Un Ung, Avner Schlessinger

Nucleic Acids Res., 2019

2016

GEN3VA: aggregation and analysis of gene expression signatures from related studies.

Gregory W. Gundersen, Kathleen M. Jagodnik, Holly Woodland, Nicolas F. Fernandez, Kevin Sani, Anders B. Dohlman, Peter Man-Un Ung, Caroline D. Monteiro, Avner Schlessinger, Avi Ma'ayan

BMC Bioinform., 2016

2015

Ligand Discovery for the Alanine-Serine-Cysteine Transporter (ASCT2, SLC1A5) from Homology Modeling and Virtual Screening.

Claire Colas, Christof Grewer, Nicholas James Otte, Armanda Gameiro, Thomas Albers, Kurnvir Singh, Helen Shere, Massimiliano Bonomi, Jeff Holst, Avner Schlessinger

PLoS Comput. Biol., 2015

2014

PredictProtein - an open resource for online prediction of protein structural and functional features.

Guy Yachdav, Edda Kloppmann, László Kaján, Maximilian Hecht, Tatyana Goldberg, Tobias Hamp, Peter Hönigschmid, Andrea Schafferhans, Manfred Roos, Michael Bernhofer, Lothar Richter, Haim Ashkenazy, Marco Punta, Avner Schlessinger, Yana Bromberg, Reinhard Schneider, Gerrit Vriend, Chris Sander, Nir Ben-Tal, Burkhard Rost

Nucleic Acids Res., 2014

2011

ModBase, a database of annotated comparative protein structure models, and associated resources.

Ursula Pieper, Benjamin M. Webb, David T. Barkan, Dina Schneidman-Duhovny, Avner Schlessinger, Hannes Braberg, Zheng Yang, Elaine C. Meng, Eric F. Pettersen, Conrad C. Huang, Ruchira S. Datta, Parthasarathy Sampathkumar, Mallur S. Madhusudhan, Kimmen Sjölander, Thomas E. Ferrin, Stephen K. Burley, Andrej Sali

Nucleic Acids Res., 2011

2010

Protein secondary structure appears to be robust under <i>in silico</i> evolution while protein disorder appears not to be.

Christian Schaefer, Avner Schlessinger, Burkhard Rost

Bioinform., 2010

2007

Natively Unstructured Loops Differ from Other Loops.

Avner Schlessinger, Jinfeng Liu, Burkhard Rost

PLoS Comput. Biol., 2007

Natively unstructured regions in proteins identified from contact predictions.

Avner Schlessinger, Marco Punta, Burkhard Rost

Bioinform., 2007

2006

Epitome: database of structure-inferred antigenic epitopes.

Avner Schlessinger, Yanay Ofran, Guy Yachdav, Burkhard Rost

Nucleic Acids Res., 2006

PROFbval: predict flexible and rigid residues in proteins.

Avner Schlessinger, Guy Yachdav, Burkhard Rost

Bioinform., 2006