Zhijian Xu

According to our database, Zhijian Xu authored at least 44 papers between 2009 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

D3Rings: A Fast and Accurate Method for Ring System Identification and Deep Generation of Drug-Like Cyclic Compounds.

Minfei Ma, Xinben Zhang, Liping Zhou, Zijian Han, Yulong Shi, Jintian Li, Leyun Wu, Zhijian Xu, Weiliang Zhu

J. Chem. Inf. Model., 2024

Multi-Patch Prediction: Adapting LLMs for Time Series Representation Learning.

Yuxuan Bian, Xuan Ju, Jiangtong Li, Zhijian Xu, Dawei Cheng, Qiang Xu

CoRR, 2024

2023

D3CARP: a comprehensive platform with multiple-conformation based docking, ligand similarity search and deep learning approaches for target prediction and virtual screening.

Yulong Shi, Xinben Zhang, Yanqing Yang, Tingting Cai, Cheng Peng, Leyun Wu, Liping Zhou, Jiaxin Han, Minfei Ma, Weiliang Zhu, Zhijian Xu

Comput. Biol. Medicine, September, 2023

Discovery of Novel SIRT1/2 Inhibitors with Effective Cytotoxicity against Human Leukemia Cells.

Haiyan Cai, Yingying Wang, Jing Zhang, Zhenquan Wei, Teng Yan, Chenxi Feng, Zhijian Xu, Aiwu Zhou, Yingli Wu

J. Chem. Inf. Model., August, 2023

SoCube: an innovative end-to-end doublet detection algorithm for analyzing scRNA-seq data.

Hongning Zhang, Mingkun Lu, Gaole Lin, Lingyan Zheng, Wei Zhang, Zhijian Xu, Feng Zhu

Briefings Bioinform., May, 2023

Molecular dynamics study on the behavior and binding mechanism of target protein Transgelin-2 with its agonist TSG12 for anti-asthma drug discovery.

Leyun Wu, Guangpu Wang, Liping Zhou, Mengxia Mo, Yulong Shi, Bo Li, Leimiao Yin, Qiang Zhao, Yongqing Yang, Chengkun Wu, Zhijian Xu, Weiliang Zhu

Comput. Biol. Medicine, February, 2023

Preliminary Study on Incremental Learning for Large Language Model-based Recommender Systems.

Tianhao Shi, Yang Zhang, Zhijian Xu, Chong Chen, Fuli Feng, Xiangnan He, Qi Tian

CoRR, 2023

FITS: Modeling Time Series with 10k Parameters.

Zhijian Xu, Ailing Zeng, Qiang Xu

CoRR, 2023

FrAug: Frequency Domain Augmentation for Time Series Forecasting.

Muxi Chen, Zhijian Xu, Ailing Zeng, Qiang Xu

CoRR, 2023

Invisible Video Watermark Method Based on Maximum Voting and Probabilistic Superposition.

Kangshuai Guo, Zhijian Xu, Shichao Luo, Feigao Wei, Yan Wang, Yanru Zhang

Proceedings of the 31st ACM International Conference on Multimedia, 2023

Lightweight Multi-scale Transformer for Automatic Skin Lesions Segmentation.

Zhijian Xu, Xingyue Guo, Juan Wang

Proceedings of the 15th International Conference on Digital Image Processing, 2023

2022

Exploring the Binding Affinity and Mechanism between ACE2 and the Trimers of Delta and Omicron Spike Proteins by Molecular Dynamics Simulation and Bioassay.

Liping Zhou, Tingting Liu, Mengxia Mo, Yulong Shi, Leyun Wu, Yishui Li, Qiuping Qin, Weiliang Zhu, Chengkun Wu, Likun Gong, Zhijian Xu

J. Chem. Inf. Model., 2022

Picture-word order compound protein interaction: Predicting compound-protein interaction using structural images of compounds.

Ying Qian, Xuelian Li, Jian Wu, Aimin Zhou, Zhijian Xu, Qian Zhang

J. Comput. Chem., 2022

Cover Image.

Ying Qian, Xuelian Li, Jian Wu, Aimin Zhou, Zhijian Xu, Qian Zhang

J. Comput. Chem., 2022

Conserved protein targets for developing pan-coronavirus drugs based on sequence and 3D structure similarity analyses.

Minfei Ma, Yanqing Yang, Leyun Wu, Liping Zhou, Yulong Shi, Jiaxin Han, Zhijian Xu, Weiliang Zhu

Comput. Biol. Medicine, 2022

D3AI-Spike: A deep learning platform for predicting binding affinity between SARS-CoV-2 spike receptor binding domain with multiple amino acid mutations and human angiotensin-converting enzyme 2.

Jiaxin Han, Tingting Liu, Xinben Zhang, Yanqing Yang, Yulong Shi, Jintian Li, Minfei Ma, Weiliang Zhu, Likun Gong, Zhijian Xu

Comput. Biol. Medicine, 2022

D3PM: a comprehensive database for protein motions ranging from residue to domain.

Cheng Peng, Xinben Zhang, Zhijian Xu, Zhaoqiang Chen, Yanqing Yang, Tingting Cai, Weiliang Zhu

BMC Bioinform., 2022

D3AI-CoV: a deep learning platform for predicting drug targets and for virtual screening against COVID-19.

Yanqing Yang, Deshan Zhou, Xinben Zhang, Yulong Shi, Jiaxin Han, Liping Zhou, Leyun Wu, Minfei Ma, Jintian Li, Shaoliang Peng, Zhijian Xu, Weiliang Zhu

Briefings Bioinform., 2022

Exploring the immune evasion of SARS-CoV-2 variant harboring E484K by molecular dynamics simulations.

Leyun Wu, Cheng Peng, Yanqing Yang, Yulong Shi, Liping Zhou, Zhijian Xu, Weiliang Zhu

Briefings Bioinform., 2022

Rolling Colors: Adversarial Laser Exploits against Traffic Light Recognition.

Chen Yan, Zhijian Xu, Zhanyuan Yin, Xiaoyu Ji, Wenyuan Xu

Proceedings of the 31st USENIX Security Symposium, 2022

SCINet: Time Series Modeling and Forecasting with Sample Convolution and Interaction.

Minhao Liu, Ailing Zeng, Muxi Chen, Zhijian Xu, Qiuxia Lai, Lingna Ma, Qiang Xu

Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022

Multimodal medical image fusion based on average cross bilateral filtering.

Xingyue Guo, Juan Wang, Zhijian Xu

Proceedings of the 2022 10th International Conference on Information Technology: IoT and Smart City, 2022

2021

D3DistalMutation: a Database to Explore the Effect of Distal Mutations on Enzyme Activity.

Xiaoyu Wang, Xinben Zhang, Cheng Peng, Yulong Shi, Huiyu Li, Zhijian Xu, Weiliang Zhu

J. Chem. Inf. Model., 2021

DeepFIB: Self-Imputation for Time Series Anomaly Detection.

Minhao Liu, Zhijian Xu, Qiang Xu

CoRR, 2021

MultiDTI: drug-target interaction prediction based on multi-modal representation learning to bridge the gap between new chemical entities and known heterogeneous network.

Deshan Zhou, Zhijian Xu, Wentao Li, Xiaolan Xie, Shaoliang Peng

Bioinform., 2021

Ligand-based approach for predicting drug targets and for virtual screening against COVID-19.

Yanqing Yang, Zhengdan Zhu, Xiaoyu Wang, Xinben Zhang, Kaijie Mu, Yulong Shi, Cheng Peng, Zhijian Xu, Weiliang Zhu

Briefings Bioinform., 2021

DeepR2cov: deep representation learning on heterogeneous drug networks to discover anti-inflammatory agents for COVID-19.

Xiaoqi Wang, Bin Xin, Weihong Tan, Zhijian Xu, Kenli Li, Fei Li, Wu Zhong, Shaoliang Peng

Briefings Bioinform., 2021

IDOS: Improved D3DOCK on Spark.

Yonghui Cui, Zhijian Xu, Shaoliang Peng

Proceedings of the Bioinformatics Research and Applications - 17th International Symposium, 2021

2020

Interaction Nature and Computational Methods for Halogen Bonding: A Perspective.

Zhengdan Zhu, Zhijian Xu, Weiliang Zhu

J. Chem. Inf. Model., 2020

Substitution Effect of the Trifluoromethyl Group on the Bioactivity in Medicinal Chemistry: Statistical Analysis and Energy Calculations.

Amina Abula, Zhijian Xu, Zhengdan Zhu, Cheng Peng, Zhaoqiang Chen, Weiliang Zhu, Haji Akber Aisa

J. Chem. Inf. Model., 2020

Accurate prediction of relative binding affinities of a series of HIV-1 protease inhibitors using semi-empirical quantum mechanical charge.

Cheng Peng, Jinan Wang, Zhijian Xu, Tingting Cai, Weiliang Zhu

J. Comput. Chem., 2020

2019

Underestimated Noncovalent Interactions in Protein Data Bank.

Zhijian Xu, Qian Zhang, Jiye Shi, Weiliang Zhu

J. Chem. Inf. Model., 2019

D3Pockets: A Method and Web Server for Systematic Analysis of Protein Pocket Dynamics.

Zhaoqiang Chen, Xinben Zhang, Cheng Peng, Jinan Wang, Zhijian Xu, Kaixian Chen, Jiye Shi, Weiliang Zhu

J. Chem. Inf. Model., 2019

2018

A new enhancement algorithm for the low illumination image based on fog-degraded model.

Feiyan Cheng, Junsheng Shi, Lijun Yun, Zhenhua Du, Zhijian Xu, Xiaoqiao Huang, Zaiqing Chen

Proceedings of the Eighth International Conference on Image Processing Theory, 2018

2017

Combined Virtual Screening and Substructure Search for Discovery of Novel FABP4 Inhibitors.

Haiyan Cai, Ting Wang, Zhuo Yang, Zhijian Xu, Guimin Wang, He-Yao Wang, Weiliang Zhu, Kaixian Chen

J. Chem. Inf. Model., September, 2017

Underestimated Halogen Bonds Forming with Protein Backbone in Protein Data Bank.

Qian Zhang, Zhijian Xu, Jiye Shi, Weiliang Zhu

J. Chem. Inf. Model., July, 2017

The Underestimated Halogen Bonds Forming with Protein Side Chains in Drug Discovery and Design.

Qian Zhang, Zhijian Xu, Weiliang Zhu

J. Chem. Inf. Model., 2017

2015

T pattern fuse construction in segment metallized film capacitors based on self-healing characteristics.

Haoyuan Li, Hua Li, Zhiwei Li, Fuchang Lin, De Liu, Wenjuan Wang, Bowen Wang, Zhijian Xu

Microelectron. Reliab., 2015

mD3DOCKxb: A Deep Parallel Optimized Software for Molecular Docking with Intel Xeon Phi Coprocessors.

Qian Cheng, Shaoliang Peng, Yutong Lu, Weiliang Zhu, Zhijian Xu, Xinben Zhang

Proceedings of the 15th IEEE/ACM International Symposium on Cluster, 2015

2014

Halogen Bond: Its Role beyond Drug-Target Binding Affinity for Drug Discovery and Development.

Zhijian Xu, Zhuo Yang, Yingtao Liu, Yunxiang Lu, Kaixian Chen, Weiliang Zhu

J. Chem. Inf. Model., 2014

2013

Multi-atlas-based segmentation of the parotid glands of MR images in patients following head-and-neck cancer radiotherapy.

Guanghui Cheng, Xiaofeng Yang, Ning Wu, Zhijian Xu, Hongfu Zhao, Yuefeng Wang, Tian Liu

Proceedings of the Medical Imaging 2013: Computer-Aided Diagnosis, 2013

2012

A Research of Chinese Sentence Constituent Labeling Based on History Hidden Markov Model.

Zhijian Xu, Siming Luo, Dan Li, Hongxia Li

Proceedings of the 2012 International Conference on Asian Language Processing, 2012

2010

A Clustering Algorithm Use SOM and K-Means in Intrusion Detection.

Huai-bin Wang, Hong-liang Yang, Zhijian Xu, Zheng Yuan

Proceedings of the International Conference on E-Business and E-Government, 2010

2009

A New Algorithm Combining Self Organizing Map with Simulated Annealing Used in Intrusion Detection.

Huai-bin Wang, Zhijian Xu, Chundong Wang, Zheng Yuan

Proceedings of the 2nd International Conference on BioMedical Engineering and Informatics, 2009