Ali R. Khan

Orcid: 0000-0002-0760-8647

According to our database1, Ali R. Khan authored at least 37 papers between 2005 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Online presence:

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Bibliography

2023
Funcmasker-flex: An Automated BIDS-App for Brain Segmentation of Human Fetal Functional MRI data.
Neuroinformatics, July, 2023

2022
Mapping the subcortical connectome using <i>in vivo</i> diffusion MRI: Feasibility and reliability.
NeuroImage, 2022

Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults.
Frontiers Neuroinformatics, 2022

2021
Corrections to "Image Guidance in Deep Brain Stimulation Surgery to Treat Parkinson's Disease: A Comprehensive Review".
IEEE Trans. Biomed. Eng., 2021

Image Guidance in Deep Brain Stimulation Surgery to Treat Parkinson's Disease: A Comprehensive Review.
IEEE Trans. Biomed. Eng., 2021

Effects of MP2RAGE B<sub>1</sub><sup>+</sup> sensitivity on inter-site T<sub>1</sub> reproducibility and hippocampal morphometry at 7T.
NeuroImage, 2021

2020
Hippocampal subfields revealed through unfolding and unsupervised clustering of laminar and morphological features in 3D BigBrain.
NeuroImage, 2020

IJCARS: MICCAI 2019 special issue.
Int. J. Comput. Assist. Radiol. Surg., 2020

2018
Quantification of local geometric distortion in structural magnetic resonance images: Application to ultra-high fields.
NeuroImage, 2018

Unfolding the hippocampus: An intrinsic coordinate system for subfield segmentations and quantitative mapping.
NeuroImage, 2018

2016
Hierarchical max-flow segmentation framework for multi-atlas segmentation with Kohonen self-organizing map based Gaussian mixture modeling.
Medical Image Anal., 2016

Individual feature maps: a patient-specific analysis tool with applications in temporal lobe epilepsy.
Int. J. Comput. Assist. Radiol. Surg., 2016

Generation and evaluation of an ultra-high-field atlas with applications in DBS planning.
Proceedings of the Medical Imaging 2016: Image Processing, 2016

Single slice US-MRI registration for neurosurgical MRI-guided US.
Proceedings of the Medical Imaging 2016: Image-Guided Procedures, Robotic Interventions, and Modeling, San Diego, California, United States, 27 February, 2016

Fast Deformable Image Registration with Non-smooth Dual Optimization.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016

2015
Training for Planning Tumour Resection: Augmented Reality and Human Factors.
IEEE Trans. Biomed. Eng., 2015

Visual Enhancement of MR Angiography Images to Facilitate Planning of Arteriovenous Malformation Interventions.
ACM Trans. Appl. Percept., 2015

Detection of temporal lobe epilepsy using support vector machines in multi-parametric quantitative MR imaging.
Comput. Medical Imaging Graph., 2015

MRBrainS Challenge: Online Evaluation Framework for Brain Image Segmentation in 3T MRI Scans.
Comput. Intell. Neurosci., 2015

2014
RANCOR: Non-Linear Image Registration with Total Variation Regularization.
CoRR, 2014

Smoothness parameter tuning for generalized hierarchical continuous max-flow segmentation.
Proceedings of the Medical Imaging 2014: Image Processing, 2014

2013
Multistructure Large Deformation Diffeomorphic Brain Registration.
IEEE Trans. Biomed. Eng., 2013

Image registration of ex-vivo MRI to sparsely sectioned histology of hippocampal and neocortical temporal lobe specimens.
NeuroImage, 2013

The Role of Augmented Reality in Training the Planning of Brain Tumor Resection.
Proceedings of the Augmented Reality Environments for Medical Imaging and Computer-Assisted Interventions, 2013

2012
Robust registration of sparsely sectioned histology to ex-vivo MRI of temporal lobe resections.
Proceedings of the Medical Imaging 2012: Image Processing, 2012

Use of a Mixed-Reality System to Improve the Planning of Brain Tumour Resections: Preliminary Results.
Proceedings of the Augmented Environments for Computer-Assisted Interventions, 2012

2011
Optimal weights for local multi-atlas fusion using supervised learning and dynamic information (SuperDyn): Validation on hippocampus segmentation.
NeuroImage, 2011

Momentum-based morphometric analysis with application to Parkinson's disease.
Proceedings of the Medical Imaging 2011: Visualization, 2011

2009
External landmark and head-shape-based functional data normalization.
Comput. Medical Imaging Graph., 2009

Freesurfer-initialized large deformation diffeomorphic metric mapping with application to Parkinson's disease.
Proceedings of the Medical Imaging 2009: Image Processing, 2009

Robust Atlas-Based Brain Segmentation Using Multi-structure Confidence-Weighted Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

A Combined Surface And VOlumetric Registration (SAVOR) Framework to Study Cortical Biomarkers and Volumetric Imaging Data.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

2008
FreeSurfer-initiated fully-automated subcortical brain segmentation in MRI using Large Deformation Diffeomorphic Metric Mapping.
NeuroImage, 2008

Representation of time-varying shapes in the large deformation diffeomorphic framework.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

2007
Symmetric Data Attachment Terms for Large Deformation Image Registration.
IEEE Trans. Medical Imaging, 2007

2006
Computing an average anatomical atlas using LDDMM and geodesic shooting.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

2005
Semi-automated Basal Ganglia Segmentation Using Large Deformation Diffeomorphic Metric Mapping.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005


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