Chee Keong Kwoh

According to our database1, Chee Keong Kwoh
  • authored at least 88 papers between 2004 and 2017.
  • has a "Dijkstra number"2 of four.

Timeline

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Bibliography

2017
Drug-Target Interaction Prediction with Graph Regularized Matrix Factorization.
IEEE/ACM Trans. Comput. Biology Bioinform., 2017

Phylogenetic Tree based Method for Uncovering Co-mutational Site-pairs in Influenza Viruses.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016
Cross-Examination for Angle-Closure Glaucoma Feature Detection.
IEEE J. Biomedical and Health Informatics, 2016

Learning ECOC Code Matrix for Multiclass Classification with Application to Glaucoma Diagnosis.
J. Medical Systems, 2016

Automated anterior segment OCT image analysis for Angle Closure Glaucoma mechanisms classification.
Computer Methods and Programs in Biomedicine, 2016

Complex wavelet based quality assessment for AS-OCT images with application to Angle Closure Glaucoma diagnosis.
Computer Methods and Programs in Biomedicine, 2016

Gene, Environment and Methylation (GEM): a tool suite to efficiently navigate large scale epigenome wide association studies and integrate genotype and interaction between genotype and environment.
BMC Bioinformatics, 2016

Drug-target interaction prediction via class imbalance-aware ensemble learning.
BMC Bioinformatics, 2016

Active learning for ontological event extraction incorporating named entity recognition and unknown word handling.
J. Biomedical Semantics, 2016

Clustering based active learning for biomedical Named Entity Recognition.
Proceedings of the 2016 International Joint Conference on Neural Networks, 2016

2015
Reliable Feature Selection for Automated Angle Closure Glaucoma Mechanism Detection.
J. Medical Systems, 2015

Predicting essential genes and synthetic lethality via influence propagation in signaling pathways of cancer cell fates.
J. Bioinformatics and Computational Biology, 2015

Classification and its application to drug-target interaction prediction.
CoRR, 2015

Fast, accurate, and reliable molecular docking with QuickVina 2.
Bioinformatics, 2015

2014
Reliable and Fast Estimation of Recombination Rates by Convergence Diagnosis and Parallel Markov Chain Monte Carlo.
IEEE/ACM Trans. Comput. Biology Bioinform., 2014

A survey on computer aided diagnosis for ocular diseases.
BMC Med. Inf. & Decision Making, 2014

Finding trans-regulatory genes and protein complexes modulating meiotic recombination hotspots of human, mouse and yeast.
BMC Systems Biology, 2014

LDsplit: screening for cis-regulatory motifs stimulating meiotic recombination hotspots by analysis of DNA sequence polymorphisms.
BMC Bioinformatics, 2014

IFACEwat: the interfacial water-implemented re-ranking algorithm to improve the discrimination of near native structures for protein rigid docking.
BMC Bioinformatics, 2014

Integrating water exclusion theory into βcontacts to predict binding free energy changes and binding hot spots.
BMC Bioinformatics, 2014

SparseHC: A Memory-efficient Online Hierarchical Clustering Algorithm.
Proceedings of the International Conference on Computational Science, 2014

Automatic sleep onset detection using single EEG sensor.
Proceedings of the 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2014

Data-driven prediction of cancer cell fates with a nonlinear model of signaling pathways.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

2013
CovalentDock Cloud: a web server for automated covalent docking.
Nucleic Acids Research, 2013

Binding Affinity Prediction for Protein-Ligand Complexes Based on β Contacts and B Factor.
Journal of Chemical Information and Modeling, 2013

CovalentDock: Automated covalent docking with parameterized covalent linkage energy estimation and molecular geometry constraints.
Journal of Computational Chemistry, 2013

Research and applications: Automatic glaucoma diagnosis through medical imaging informatics.
JAMIA, 2013

Comprehensive detection of cancer gene expression profiles and gene networks are impacted by the choice of pre-processing algorithm and gene-selection method.
IJDMB, 2013

Using causality modeling and Fuzzy Lattice Reasoning algorithm for predicting blood glucose.
Expert Syst. Appl., 2013

Improved Time Complexities for Learning Boolean Networks.
Entropy, 2013

Discovering Unique, Low-Energy Transition States Using Evolutionary Molecular Memetic Computing.
IEEE Comp. Int. Mag., 2013

Molecular docking analysis of 2009-H1N1 and 2004-H5N1 influenza virus HLA-B*4405-restricted HA epitope candidates: implications for TCR cross-recognition and vaccine development.
BMC Bioinformatics, 2013

Structural analysis of the novel influenza A (H7N9) viral Neuraminidase interactions with current approved neuraminidase inhibitors Oseltamivir, Zanamivir, and Peramivir in the presence of mutation R289K.
BMC Bioinformatics, 2013

Structural analysis on mutation residues and interfacial water molecules for human TIM disease understanding.
BMC Bioinformatics, 2013

Drug-target interaction prediction by learning from local information and neighbors.
Bioinformatics, 2013

Review of tandem repeat search tools: a systematic approach to evaluating algorithmic performance.
Briefings in Bioinformatics, 2013

Meta-analysis of Genomic and Proteomic Features to Predict Synthetic Lethality of Yeast and Human Cancer.
Proceedings of the ACM Conference on Bioinformatics, 2013

2012
Erratum to "QuickVina: Accelerating AutoDock Vina Using Gradient-Based Heuristics for Global Optimization".
IEEE/ACM Trans. Comput. Biology Bioinform., 2012

QuickVina: Accelerating AutoDock Vina Using Gradient-Based Heuristics for Global Optimization.
IEEE/ACM Trans. Comput. Biology Bioinform., 2012

Identify Predictive SNP groups in Genome Wide Association Study: A Sparse Learning Approach.
Proceedings of the 3rd International Conference on Computational Systems-Biology and Bioinformatics, 2012

Comparison of Structure-based Tools for the Prediction of Ligand Binding Site Residues in Apo-structures.
Proceedings of the 3rd International Conference on Computational Systems-Biology and Bioinformatics, 2012

Preface: Computational Systems-Biology and Bioinformatics.
Proceedings of the 3rd International Conference on Computational Systems-Biology and Bioinformatics, 2012

Discovery of Protein Complexes with Core-Attachment Structures from Tandem Affinity Purification (TAP) Data.
Journal of Computational Biology, 2012

A tree-structured covalent-bond-driven molecular memetic algorithm for optimization of ring-deficient molecules.
Computers & Mathematics with Applications, 2012

Positive-unlabeled learning for disease gene identification.
Bioinformatics, 2012

A contact-network-based simulation model for evaluating interventions under "what-if" scenarios in epidemic.
Proceedings of the Winter Simulation Conference, 2012

Globalized bipartite local model for drug-target interaction prediction.
Proceedings of the 11th International Workshop on Data Mining in Bioinformatics, 2012

GPU Accelerated Molecular Docking with Parallel Genetic Algorithm.
Proceedings of the 18th IEEE International Conference on Parallel and Distributed Systems, 2012

NetPipe: a network-based pipeline for discovery of genes and protein complexes regulating meiotic recombination hotspots.
Proceedings of the ACM International Conference on Bioinformatics, 2012

Integration of genomic and epigenomic features to predict meiotic recombination hotspots in human and mouse.
Proceedings of the ACM International Conference on Bioinformatics, 2012

2011
Trend Analysis of Length of Stay Data via Phase-Type Models.
IJKDB, 2011

A Feature Subset Selection Method Based On High-Dimensional Mutual Information.
Entropy, 2011

Construction of co-complex score matrix for protein complex prediction from AP-MS data.
Bioinformatics [ISMB/ECCB], 2011

Structural analysis of the hot spots in the binding between H1N1 HA and the 2D1 antibody: do mutations of H1N1 from 1918 to 2009 affect much on this binding?
Bioinformatics, 2011

Analyzing Trends of Hospital Length of Stay Using Phase-Type Distributions.
Proceedings of the Data Mining Workshops (ICDMW), 2011

Classification-assisted memetic algorithms for solving optimization problems with restricted equality constraint function mapping.
Proceedings of the IEEE Congress on Evolutionary Computation, 2011

Prediction of Trans-regulators of Recombination Hotspots in Mouse Genome.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

Phylogenetic and mutational analysis of 2008, 2009 & 2010 neuraminidase of H1N1 influenza A.
Proceedings of the ACM International Conference on Bioinformatics, 2011

2010
Feasibility Structure Modeling: An Effective Chaperone for Constrained Memetic Algorithms.
IEEE Trans. Evolutionary Computation, 2010

Integrating diverse biological and computational sources for reliable protein-protein interactions.
BMC Bioinformatics, 2010

Multi-threaded vectorized distance matrix computation on the CELL/BE and x86/SSE2 architectures.
Bioinformatics, 2010

A possible mutation that enables H1N1 influenza a virus to escape antibody recognition.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Outcomes of gene association analysis of cancer microarray data are impacted by pre-processing algorithms.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

2009
High performance protein sequence database scanning on the Cell Broadband Engine.
Scientific Programming, 2009

Brief Overview of Bioinformatics Activities in Singapore.
PLoS Computational Biology, 2009

A core-attachment based method to detect protein complexes in PPI networks.
BMC Bioinformatics, 2009

A GA-SVM Feature Selection Model Based on High Performance Computing Techniques.
Proceedings of the IEEE International Conference on Systems, 2009

Pairwise Distance Matrix Computation for Multiple Sequence Alignment on the Cell Broadband Engine.
Proceedings of the Computational Science, 2009

Classification-Assisted Memetic Algorithms for Equality-Constrained Optimization Problems.
Proceedings of the AI 2009: Advances in Artificial Intelligence, 2009

2008
From Biomedical Literature to Knowledge: Mining Protein-Protein Interactions.
Proceedings of the Computational Intelligence in Biomedicine and Bioinformatics, 2008

Extracting Protein-Protein Interactions from MEDLINE using the Hidden Vector State model.
IJBRA, 2008

Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen proteomes.
BMC Bioinformatics, 2008

CBESW: Sequence Alignment on the Playstation 3.
BMC Bioinformatics, 2008

Using classification for constrained memetic algorithm: A new paradigm.
Proceedings of the IEEE International Conference on Systems, 2008

A study on constrained MA using GA and SQP: Analytical vs. finite-difference gradients.
Proceedings of the IEEE Congress on Evolutionary Computation, 2008

2007
Semi-supervised learning of the hidden vector state model for extracting protein-protein interactions.
Artificial Intelligence in Medicine, 2007

Ant-MST: An Ant-Based Minimum Spanning Tree for Gene Expression Data Clustering.
Proceedings of the Pattern Recognition in Bioinformatics, 2007

Parallel DNA Sequence Alignment on the Cell Broadband Engine.
Proceedings of the Parallel Processing and Applied Mathematics, 2007

Training the Hidden Vector State Model from Un-annotated Corpus.
Proceedings of the Computational Science - ICCS 2007, 7th International Conference, Beijing, China, May 27, 2007

Semi-supervised Learning of the Hidden Vector State Model for Protein-Protein Interactions Extraction.
Proceedings of the IEEE Symposium on Computational Intelligence and Data Mining, 2007

2006
Cancer Classification With MicroRNA Expression Patterns Found By An Information Theory Approach.
JCP, 2006

Dynamic algorithm for inferring qualitative models of Gene Regulatory Networks.
IJDMB, 2006

Informative MicroRNA Expression Patterns for Cancer Classification.
Proceedings of the Data Mining for Biomedical Applications, PAKDD 2006 Workshop, 2006

Extreme Learning Machine for Predicting HLA-Peptide Binding.
Proceedings of the Advances in Neural Networks - ISNN 2006, Third International Symposium on Neural Networks, Chengdu, China, May 28, 2006

Extracting Protein-Protein Interactions from the Literature Using the Hidden Vector State Model.
Proceedings of the Computational Science, 2006

Functional Prediction of Snake Neurotoxins.
Proceedings of the Ninth International Conference on Control, 2006

2005
u-Genome: A Database on Genome Design in Unicellular Genomes.
In Silico Biology, 2005

2004
The Pattern Classification Based on the Nearest Feature Midpoints.
Proceedings of the 17th International Conference on Pattern Recognition, 2004


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