Gully A. P. C. Burns

According to our database1, Gully A. P. C. Burns authored at least 46 papers between 1999 and 2021.

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Bibliography

2021
BD2K Training Coordinating Center's ERuDIte: The Educational Resource Discovery Index for Data Science.
IEEE Trans. Emerg. Top. Comput., 2021

2019
Layout-aware Subfigure Decomposition for Complex Figures in the Biomedical Literature.
Proceedings of the IEEE International Conference on Acoustics, 2019

Linking Educational Resources on Data Science.
Proceedings of the Thirty-Third AAAI Conference on Artificial Intelligence, 2019

2018
Towards Evidence Extraction: Analysis of Scientific Figures from Studies of Molecular Interactions.
Proceedings of the Emerging Topics in Semantic Technologies, 2018

Democratizing data science through data science training.
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018

2017
Experiment Segmentation in Scientific Discourse as Clause-level Structured Prediction using Recurrent Neural Networks.
CoRR, 2017

BD2K ERuDIte: the Educational Resource Discovery Index for Data Science.
Proceedings of the 26th International Conference on World Wide Web Companion, 2017

Extracting Evidence Fragments for Distant Supervision of Molecular Interactions.
Proceedings of the First Workshop on Enabling Open Semantic Science co-located with 16th International Semantic Web Conference (ISWC 2017), 2017

An Investigation into the Pedagogical Features of Documents.
Proceedings of the 12th Workshop on Innovative Use of NLP for Building Educational Applications, 2017

Structured Generation of Technical Reading Lists.
Proceedings of the 12th Workshop on Innovative Use of NLP for Building Educational Applications, 2017

The BD2K Training Coordinating Center's Data Science Education Platform.
Proceedings of the AMIA 2017, 2017

2016
Automated detection of discourse segment and experimental types from the text of cancer pathway results sections.
Database J. Biol. Databases Curation, 2016

Abstract Meaning Representations as Linked Data.
Proceedings of the Semantic Web - ISWC 2016, 2016

Cycles of Scientific Investigation in Discourse - Machine Reading Methods for the Primary Research Contributions of a Paper.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Modeling Concept Dependencies in a Scientific Corpus.
Proceedings of the 54th Annual Meeting of the Association for Computational Linguistics, 2016

2014
Reports on the 2013 AAAI Fall Symposium Series.
AI Mag., 2014

2013
Towards structured sharing of raw and derived neuroimaging data across existing resources.
NeuroImage, 2013

Modeling functional Magnetic Resonance Imaging (fMRI) experimental variables in the Ontology of Experimental Variables and Values (OoEVV).
NeuroImage, 2013

Virk: an active learning-based system for bootstrapping knowledge base development in the neurosciences.
Frontiers Neuroinformatics, 2013

SKIMMR: machine-aided skim-reading.
Proceedings of the 18th International Conference on Intelligent User Interfaces, 2013

Preface.
Proceedings of the 2013 AAAI Fall Symposia, Arlington, Virginia, USA, November 15-17, 2013, 2013

Organizing Committee.
Proceedings of the 2013 AAAI Fall Symposia, Arlington, Virginia, USA, November 15-17, 2013, 2013

Finna: A Paragraph Prioritization System for Biocuration in the Neurosciences.
Proceedings of the 2013 AAAI Fall Symposia, Arlington, Virginia, USA, November 15-17, 2013, 2013

2012
Layout-aware text extraction from full-text PDF of scientific articles.
Source Code Biol. Medicine, 2012

Towards structured sharing of raw and derived neuroimaging data across existing resources
CoRR, 2012

A 2012 Workshop: Vaccine and Drug Ontology in the Study of Mechanism and Effect (VDOSME 2012).
J. Biomed. Semant., 2012

Text mining for the biocuration workflow.
Database J. Biol. Databases Curation, 2012

Preliminary Meta-Analyses of Experimental Design with Examples from HIV Vaccine Protection Studies.
Proceedings of the Discovery Informatics: The Role of AI Research in Innovating Scientific Processes, 2012

2011
Enabling collaborative research using the Biomedical Informatics Research Network (BIRN).
J. Am. Medical Informatics Assoc., 2011

Knowledge Synthesis with Maps of Neural Connectivity.
Frontiers Neuroinformatics, 2011

Knowledge Engineering Tools for Reasoning with Scientific Observations and Interpretations: a Neural Connectivity Use Case.
BMC Bioinform., 2011

The Role of Information Extraction in the Design of a Document Triage Application for Biocuration.
Proceedings of the 2011 Workshop on Biomedical Natural Language Processing, 2011

2009
Biomedical knowledge engineering tools based on experimental design: a case study based on neuroanatomical tract-tracing experiments.
Proceedings of the 5th International Conference on Knowledge Capture (K-CAP 2009), 2009

The NIH Visual Browser: An Interactive Visualization of Biomedical Research.
Proceedings of the 13th International Conference on Information Visualisation, 2009

2008
Intelligent Approaches to Mining the Primary Research Literature: Techniques, Systems, and Examples.
Proceedings of the Computational Intelligence in Medical Informatics, 2008

Towards Automated Semantic Analysis on Biomedical Research Articles.
Proceedings of the Third International Joint Conference on Natural Language Processing, 2008

Adaptive Information Extraction for Complex Biomedical Tasks.
Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing, 2008

2007
Extracting Data Records from Unstructured Biomedical Full Text.
Proceedings of the EMNLP-CoNLL 2007, 2007

Infrastructure for Annotation-Driven Information Extraction from the Primary Scientific Literature: Principles and Practice.
Proceedings of the 2007 IEEE International Conference on Services Computing, 2007

2006
NeuroScholar's electronic laboratory notebook and its application to neuroendocrinology.
Neuroinformatics, 2006

The NeuARt II system: a viewing tool for neuroanatomical data based on published neuroanatomical atlases.
BMC Bioinform., 2006

2003
Tools and approaches for the construction of knowledge models from the neuroscientific literature.
Neuroinformatics, 2003

2002
Software engineering tools and approaches for neuroinformatics: the design and implementation of the View-Primitive Data Model framework (VPDMf).
Neurocomputing, 2002

2001
Towards a federated neuroscientific knowledge management system using brain atlases.
Neurocomputing, 2001

1999
Neuroscholar 1.00, a neuroinformatics databasing website.
Neurocomputing, 1999

Visualization of Spatial Neuroanatomical Data.
Proceedings of the Visual Information and Information Systems, 1999


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