Erick Antezana

According to our database, Erick Antezana authored at least 30 papers between 2004 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

Ten simple rules to run a successful BioHackathon.

Leyla J. García, Erick Antezana, Alexander García Castro, Evan Bolton, Rafael C. Jiménez, Pjotr Prins, Juan M. Banda, Toshiaki Katayama

PLoS Comput. Biol., 2020

The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.

Elizabeth Arnaud, Marie-Angélique Laporte, Soonho Kim, Céline Aubert, Sabina Leonelli, Berta Miro, Laurel Cooper, Pankaj Jaiswal, Gideon Kruseman, Rosemary Shrestha, Pier Luigi Buttigieg, Christopher J. Mungall, Julian Pietragalla, Afolabi Agbona, Jacqueline Muliro, Jeffrey Detras, Vilma Hualla, Abhishek Rathore, Roma Rani Das, Ibnou Dieng, Guillaume Bauchet, Naama Menda, Cyril Pommier, Felix Shaw, David Lyon, Leroy Mwanzia, Henry Juarez, Enrico Bonaiuti, Brian Chiputwa, Oluremi Olatunbosun, Sandrine Auzoux, Esther Dzalé Yeumo, Lukas A. Mueller, Kevin A. T. Silverstein, Alexandra Lafargue, Erick Antezana, Medha Devare, Brian King

Patterns, 2020

BioHackathon 2015: Semantics of data for life sciences and reproducible research.

Rutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven T. Bolleman, Evan E. Bolton, Raoul Jean Pierre Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, Kevin Bretonnel Cohen, Eric W. Deutsch, Jesualdo Tomás Fernández-Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García Castro, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick S. Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yuki Naito, Takeru Nakazato, Jeremy NguyenXuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosinach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron R. Taylor, Mark Thompson, Ikuo Uchiyama, Bruno Vieira, Chih-Hsuan Wei, Mark D. Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, Toshihisa Takagi

F1000Research, 2020

2019

BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services.

Toshiaki Katayama, Shuichi Kawashima, Gos Micklem, Shin Kawano, Jin-Dong Kim, Simon Kocbek, Shinobu Okamoto, Yue Wang, Hongyan Wu, Atsuko Yamaguchi, Yasunori Yamamoto, Erick Antezana, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Masaki Banno, Joachim Baran, Jerven T. Bolleman, Raoul Jean Pierre Bonnal, Hidemasa Bono, Jesualdo Tomás Fernández-Breis, Robert M. Buels, Matthew P. Campbell, Hirokazu Chiba, Peter J. A. Cock, Kevin Bretonnel Cohen, Michel Dumontier, Takatomo Fujisawa, Toyofumi Fujiwara, Leyla J. García, Pascale Gaudet, Emi Hattori, Robert Hoehndorf, Kotone Itaya, Maori Ito, Daniel Jamieson, Simon Jupp, Nick S. Juty, Alex Kalderimis, Fumihiro Kato, Hideya Kawaji, Takeshi Kawashima, Akira R. Kinjo, Yusuke Komiyama, Masaaki Kotera, Tatsuya Kushida, James Malone, Masaaki Matsubara, Satoshi Mizuno, Sayaka Mizutani, Hiroshi Mori, Yuki Moriya, Katsuhiko Murakami, Takeru Nakazato, Hiroyo Nishide, Yosuke Nishimura, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Hiromasa Ono, Yasset Pérez-Riverol, Daisuke Shinmachi, Andrea Splendiani, Francesco Strozzi, Shinya Suzuki, Junichi Takehara, Mark Thompson, Toshiaki Tokimatsu, Ikuo Uchiyama, Karin Verspoor, Mark D. Wilkinson, Sarala M. Wimalaratne, Issaku Yamada, Nozomi Yamamoto, Masayuki Yarimizu, Shoko Kawamoto, Toshihisa Takagi

F1000Research, 2019

2017

Shō-coin: A Knowledge-Based Economy for Life Sciences.

Alexander García Castro, Erick Antezana, Jael García, Olga L. Giraldo, Pjotr Prins, Rutger A. Vos

Proceedings of the 10th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS 2017), 2017

2014

Using the relation ontology Metarel for modelling Linked Data as multi-digraphs.

Ward Blondé, Erick Antezana, Vladimir Mironov, Stefan Schulz, Martin Kuiper, Bernard De Baets

Semantic Web, 2014

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.

Toshiaki Katayama, Mark D. Wilkinson, Kiyoko F. Aoki-Kinoshita, Shuichi Kawashima, Yasunori Yamamoto, Atsuko Yamaguchi, Shinobu Okamoto, Shin Kawano, Jin-Dong Kim, Yue Wang, Hongyan Wu, Yoshinobu Kano, Hiromasa Ono, Hidemasa Bono, Simon Kocbek, Jan Aerts, Yukie Akune, Erick Antezana, Kazuharu Arakawa, Bruno Aranda, Joachim Baran, Jerven T. Bolleman, Raoul Jean Pierre Bonnal, Pier Luigi Buttigieg, Matthew P. Campbell, Yi-an Chen, Hirokazu Chiba, Peter J. A. Cock, Kevin Bretonnel Cohen, Alexandru Constantin

J. Biomed. Semant., 2014

2013

OPPL-Galaxy, a Galaxy tool for enhancing ontology exploitation as part of bioinformatics workflows.

Mikel Egaña Aranguren, Jesualdo Tomás Fernández-Breis, Erick Antezana, Chris Mungall, Alejandro Rodríguez González, Mark D. Wilkinson

J. Biomed. Semant., 2013

2012

Gauging triple stores with actual biological data.

Vladimir Mironov, Nirmala Seethappan, Ward Blondé, Erick Antezana, Andrea Splendiani, Martin Kuiper

BMC Bioinform., 2012

Profiling of Semantically Annotated Proteins.

Jens Hollunder, Vladimir Mironov, Erick Antezana, Robert Hoehndorf, Martin Kuiper

Proceedings of the 5th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2012

NCBO-Galaxy: bridging the BioPortal web services and the Galaxy platform.

José Antonio Miñarro-Giménez, Mikel Egaña Aranguren, Jesualdo Tomás Fernández-Breis, Erick Antezana

Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

2011

Reasoning with bio-ontologies: using relational closure rules to enable practical querying.

Ward Blondé, Vladimir Mironov, Aravind Venkatesan, Erick Antezana, Bernard De Baets, Martin Kuiper

Bioinform., 2011

Flexibility and utility of the cell cycle ontology.

Vladimir Mironov, Erick Antezana, Mikel Egaña, Ward Blondé, Bernard De Baets, Martin Kuiper, Robert Stevens

Appl. Ontology, 2011

The RDF foundry: call for an initiative to build enhanced RDF resources for biological data integration.

Aravind Venkatesan, Ward Blondé, Erick Antezana, Mats Skillingstad, M. Scott Marshall, Bernard De Baets, Vladimir Mironov, Martin Kuiper

Proceedings of the International Conference on Web Intelligence, Mining and Semantics, 2011

Semantic systems biology: enabling integrative biology via semantic web technologies.

Erick Antezana, Ward Blondé, Aravind Venkatesan, Bernard De Baets, Vladimir Mironov, Martin Kuiper

Proceedings of the International Conference on Web Intelligence, Mining and Semantics, 2011

OPPL-Galaxy: enhancing ontology exploitation in galaxy with OPPL.

Mikel Egaña Aranguren, Jesualdo Tomás Fernández-Breis, Erick Antezana

Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences, 2011

2010

ONTO-ToolKit: enabling bio-ontology engineering via Galaxy.

Erick Antezana, Aravind Venkatesan, Chris Mungall, Vladimir Mironov, Martin Kuiper

BMC Bioinform., 2010

Benchmarking Triple Stores with Biological Data.

Vladimir Mironov, Nirmala Seethappan, Ward Blondé, Erick Antezana, Bjorn Lindi, Martin Kuiper

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2010

2009

Towards semantic systems biology: biological knowledge management using semantic web technologies.

Erick Antezana

PhD thesis, 2009

BioGateway: a semantic systems biology tool for the life sciences.

Erick Antezana, Ward Blondé, Mikel Egaña, Alistair Rutherford, Robert Stevens, Bernard De Baets, Vladimir Mironov, Martin Kuiper

BMC Bioinform., 2009

Biological knowledge management: the emerging role of the Semantic Web technologies.

Erick Antezana, Martin Kuiper, Vladimir Mironov

Briefings Bioinform., 2009

2008

Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology.

Mikel Egaña Aranguren, Erick Antezana, Martin Kuiper, Robert Stevens

BMC Bioinform., 2008

ONTO-PERL: An API for supporting the development and analysis of bio-ontologies.

Erick Antezana, Mikel Egaña, Bernard De Baets, Martin Kuiper, Vladimir Mironov

Bioinform., 2008

The Cell Cycle Ontology: An Application Ontology Supporting the Life Sciences.

Erick Antezana, Mikel Egaña, Ward Blondé, Robert Stevens, Bernard De Baets, Vladimir Mironov, Martin Kuiper

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, 2008

BioGateway: Integrated RDF for Life Science Queries.

Erick Antezana, Ward Blondé, Mikel Egaña, Alistair Rutherford, Robert Stevens, Bernard De Baets, Vladimir Mironov, Martin Kuiper

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, 2008

Structuring the Life Science Resourceome for Semantic Systems Biology: Lessons from the BioGateway Project.

Erick Antezana, Ward Blondé, Mikel Egaña, Alistair Rutherford, Robert Stevens, Bernard De Baets, Vladimir Mironov, Martin Kuiper

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, 2008

Transforming the Axiomisation of Ontologies: The Ontology Pre-Processor Language.

Mikel Egaña, Robert Stevens, Erick Antezana

Proceedings of the Fourth OWLED Workshop on OWL: Experiences and Directions, 2008

Applying Ontology Design Patterns in Bio-ontologies.

Mikel Egaña, Alan L. Rector, Robert Stevens, Erick Antezana

Proceedings of the Knowledge Engineering: Practice and Patterns, 2008

2006

A Cell-Cycle Knowledge Integration Framework.

Erick Antezana, Elena Tsiporkova, Vladimir Mironov, Martin Kuiper

Proceedings of the Data Integration in the Life Sciences, Third International Workshop, 2006

2004

The aMAZE LightBench: a web interface to a relational database of cellular processes.

Christian Lemer, Erick Antezana, Fabian Couche, Frédéric Fays, Xavier Santolaria, Rekin's Janky, Yves Deville, Jean Richelle, Shoshana J. Wodak

Nucleic Acids Res., 2004