Michelle S. Scott

According to our database, Michelle S. Scott authored at least 20 papers between 2004 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Newfound Coding Potential of Transcripts Unveils Missing Members of Human Protein Communities.

Sébastien Leblanc, Marie A. Brunet, Jean-Francois Jacques, Amina M. Lekehal, Andréa Duclos, Alexia Tremblay, Alexis Bruggeman-Gascon, Sondos Samandi, Mylène Brunelle, Alan A. Cohen, Michelle S. Scott, Xavier Roucou

Genom. Proteom. Bioinform., June, 2023

snoDB 2.0: an enhanced interactive database, specializing in human snoRNAs.

Danny Bergeron, Hermes Paraqindes, Étienne Fafard-Couture, Gabrielle Deschamps-Francoeur, Laurence Faucher-Giguère, Philia Bouchard-Bourelle, Sherif Abou Elela, Frédéric Catez, Virginie Marcel, Michelle S. Scott

Nucleic Acids Res., January, 2023

2022

SAPFIR: A webserver for the identification of alternative protein features.

Delong Zhou, Yvan Tran, Sherif Abou Elela, Michelle S. Scott

BMC Bioinform., 2022

2021

RNAcentral 2021: secondary structure integration, improved sequence search and new member databases.

Blake A. Sweeney, Anton I. Petrov, Carlos Eduardo Ribas, Robert D. Finn, Alex Bateman, Maciej Szymanski, Wojciech M. Karlowski, Stefan E. Seemann, Jan Gorodkin, Jamie J. Cannone, Robin Ray Gutell, Simon Kay, Steven J. Marygold, Gilberto dos Santos, Adam Frankish, Jonathan M. Mudge, Ruth Barshir, Simon Fishilevich, Patricia P. Chan, Todd M. Lowe, Ruth L. Seal, Elspeth A. Bruford, Simona Panni, Pablo Porras, Dimitra Karagkouni, Artemis G. Hatzigeorgiou, Lina Ma, Zhang Zhang, Pieter-Jan Volders, Pieter Mestdagh, Sam Griffiths-Jones, Bastian Fromm, Kevin J. Peterson, Ioanna Kalvari, Eric P. Nawrocki, Anton S. Petrov, Shuai Weng, Philia Bouchard-Bourelle, Michelle S. Scott, Lauren M. Lui, David Hoksza, Ruth C. Lovering, Barbara Kramarz, Prita Mani, Sridhar Ramachandran, Zasha Weinberg

Nucleic Acids Res., 2021

OpenProt 2021: deeper functional annotation of the coding potential of eukaryotic genomes.

Marie A. Brunet, Jean-François Lucier, Maxime Levesque, Sébastien Leblanc, Jean-Francois Jacques, Hassan R. H. Al-Saedi, Noé Guilloy, Frédéric Grenier, Mariano Avino, Isabelle Fournier, Michel Salzet, Aïda Ouangraoua, Michelle S. Scott, François-Michel Boisvert, Xavier Roucou

Nucleic Acids Res., 2021

Current RNA-seq methodology reporting limits reproducibility.

Joël Simoneau, Simon Dumontier, Ryan Gosselin, Michelle S. Scott

Briefings Bioinform., 2021

2020

snoDB: an interactive database of human snoRNA sequences, abundance and interactions.

Philia Bouchard-Bourelle, Clément Desjardins-Henri, Darren Mathurin-St-Pierre, Gabrielle Deschamps-Francoeur, Étienne Fafard-Couture, Jean-Michel Garant, Sherif Abou Elela, Michelle S. Scott

Nucleic Acids Res., 2020

2019

OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes.

Marie A. Brunet, Mylène Brunelle, Jean-François Lucier, Vivian Delcourt, Maxime Levesque, Frédéric Grenier, Sondos Samandi, Sébastien Leblanc, Jean-David Aguilar, Pascal Dufour, Jean-Francois Jacques, Isabelle Fournier, Aïda Ouangraoua, Michelle S. Scott, François-Michel Boisvert, Xavier Roucou

Nucleic Acids Res., 2019

CoCo: RNA-seq read assignment correction for nested genes and multimapped reads.

Gabrielle Deschamps-Francoeur, Vincent Boivin, Sherif Abou Elela, Michelle S. Scott

Bioinform., 2019

2017

Motif independent identification of potential RNA G-quadruplexes by G4RNA screener.

Jean-Michel Garant, Jean-Pierre Perreault, Michelle S. Scott

Bioinform., 2017

Aligning coding sequences with frameshift extension penalties.

Safa Jammali, Esaie Kuitche, Ayoub Rachati, François Bélanger, Michelle S. Scott, Aïda Ouangraoua

Algorithms Mol. Biol., 2017

2015

G4RNA: an RNA G-quadruplex database.

Jean-Michel Garant, Mikael J. Luce, Michelle S. Scott, Jean-Pierre Perreault

Database J. Biol. Databases Curation, 2015

2011

NoD: a Nucleolar localization sequence detector for eukaryotic and viral proteins.

Michelle S. Scott, Peter V. Troshin, Geoffrey J. Barton

BMC Bioinform., 2011

2010

Human protein-protein interaction prediction.

Mark D. McDowall, Michelle S. Scott, Geoffrey J. Barton

BMC Bioinform., 2010

2009

Human miRNA Precursors with Box H/ACA snoRNA Features.

Michelle S. Scott, Fabio Avolio, Motoharu Ono, Angus I. Lamond, Geoffrey J. Barton

PLoS Comput. Biol., 2009

PIPs: human protein-protein interaction prediction database.

Mark D. McDowall, Michelle S. Scott, Geoffrey J. Barton

Nucleic Acids Res., 2009

2007

Prediction and ranking of human protein-protein interactions within a Bayesian framework.

Michelle S. Scott, Geoffrey J. Barton

BMC Syst. Biol., 2007

Probabilistic prediction and ranking of human protein-protein interactions.

Michelle S. Scott, Geoffrey J. Barton

BMC Bioinform., 2007

2005

Refining Protein Subcellular Localization.

Michelle S. Scott, Sara J. Calafell, David Y. Thomas, Michael T. Hallett

PLoS Comput. Biol., 2005

2004

The Hera database and its use in the characterization of endoplasmic reticulum proteins.

Michelle S. Scott, Guoqing Lu, Michael T. Hallett, David Y. Thomas

Bioinform., 2004