David Hoksza
Orcid: 0000-0003-4679-0557
According to our database1,
David Hoksza
authored at least 69 papers
between 2007 and 2024.
Collaborative distances:
Collaborative distances:
Timeline
Legend:
Book In proceedings Article PhD thesis Dataset OtherLinks
Online presence:
-
on zbmath.org
-
on orcid.org
On csauthors.net:
Bibliography
2024
Knowl. Inf. Syst., February, 2024
2023
Visualization of automatically combined disease maps and pathway diagrams for rare diseases.
Frontiers Bioinform., May, 2023
Proceedings of the Computer-Human Interaction Research and Applications, 2023
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
2022
AHoJ: rapid, tailored search and retrieval of apo and holo protein structures for user-defined ligands.
Bioinform., December, 2022
Nucleic Acids Res., 2022
PrankWeb 3: accelerated ligand-binding site predictions for experimental and modelled protein structures.
Nucleic Acids Res., 2022
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
Exploration of protein sequence embeddings for protein-ligand binding site detection.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
2021
IEEE ACM Trans. Comput. Biol. Bioinform., 2021
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases.
Nucleic Acids Res., 2021
2020
Nucleic Acids Res., 2020
Nucleic Acids Res., 2020
Briefings Bioinform., 2020
2019
Nucleic Acids Res., 2019
MINERVA API and plugins: opening molecular network analysis and visualization to the community.
Bioinform., 2019
rPredictorDB: a predictive database of individual secondary structures of RNAs and their formatted plots.
Database J. Biol. Databases Curation, 2019
2018
P2Rank: machine learning based tool for rapid and accurate prediction of ligand binding sites from protein structure.
J. Cheminformatics, 2018
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
Peptide-Binding Site Prediction From Protein Structure via points on the Solvent Accessible Surface.
Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018
2017
Utilizing knowledge base of amino acids structural neighborhoods to predict protein-protein interaction sites.
BMC Bioinform., 2017
BMC Bioinform., 2017
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
Template-based prediction of RNA tertiary structure using its predicted secondary structure.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
2016
Scaffold analysis of PubChem database as background for hierarchical scaffold-based visualization.
J. Cheminformatics, 2016
Proceedings of the 2016 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2016
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016
2015
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
Improving protein-ligand binding site prediction accuracy by classification of inner pocket points using local features.
J. Cheminformatics, 2015
Proceedings of the 26th International Workshop on Database and Expert Systems Applications, 2015
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015
P2RANK: Knowledge-Based Ligand Binding Site Prediction Using Aggregated Local Features.
Proceedings of the Algorithms for Computational Biology, 2015
2014
J. Cheminformatics, 2014
Proceedings of the Bioinformatics Research and Applications - 10th International Symposium, 2014
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014
2013
On Comparison of SimTandem with State-of-the-Art Peptide Identification Tools, Efficiency of Precursor Mass Filter and Dealing with Variable Modifications.
J. Integr. Bioinform., 2013
Proceedings of the Advances in Bioinformatics and Computational Biology, 2013
A Statistical Comparison of SimTandem with State-of-the-Art Peptide Identification Tools.
Proceedings of the 7th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2013
Proceedings of the 2013 IEEE/ACIS 12th International Conference on Computer and Information Science, 2013
2012
Non-metric similarity search of tandem mass spectra including posttranslational modifications.
J. Discrete Algorithms, 2012
Proceedings of the Similarity Search and Applications - 5th International Conference, 2012
Proceedings of the Bioinformatics Research and Applications - 8th International Symposium, 2012
Proceedings of the Euro-Par 2012: Parallel Processing Workshops, 2012
Proceedings of the Euro-Par 2012: Parallel Processing Workshops, 2012
2011
Proceedings of the Fourth International Conference on Similarity Search and Applications, 2011
Proceedings of the Fourth International Conference on Similarity Search and Applications, 2011
Proceedings of the Bioinformatics Research and Applications - 7th International Symposium, 2011
Proceedings of the 11th IEEE International Conference on Bioinformatics and Bioengineering, 2011
2010
Proceedings of the Third International Workshop on Similarity Search and Applications, 2010
Parametrised Hausdorff Distance as a Non-Metric Similarity Model for Tandem Mass Spectrometry.
Proceedings of the Dateso 2010 Annual International Workshop on DAtabases, 2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010
2009
Proceedings of the Second International Workshop on Similarity Search and Applications, 2009
Proceedings of the 2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2009
Proceedings of the 2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2009
2008
Proceedings of the Bioinformatics Research and Applications, 2008
Proceedings of the 14th International Conference on Management of Data, 2008
2007
Proceedings of the Dateso 2007 Annual International Workshop on DAtabases, 2007
Proceedings of the Advances in Databases: Concepts, 2007
Proceedings of the Advances in Databases and Information Systems, 2007