Artemis G. Hatzigeorgiou

Orcid: 0000-0003-1414-5668

According to our database1, Artemis G. Hatzigeorgiou authored at least 52 papers between 1995 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2023
DIANA-miRPath v4.0: expanding target-based miRNA functional analysis in cell-type and tissue contexts.
Nucleic Acids Res., July, 2023

DIANA-microT 2023: including predicted targets of virally encoded miRNAs.
Nucleic Acids Res., July, 2023

2022
DIANA-miTED: a microRNA tissue expression database.
Nucleic Acids Res., 2022

DeepTSS: multi-branch convolutional neural network for transcription start site identification from CAGE data.
BMC Bioinform., 2022

2021
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases.
Nucleic Acids Res., 2021

Peryton: a manual collection of experimentally supported microbe-disease associations.
Nucleic Acids Res., 2021

DIANA-miRGen v4: indexing promoters and regulators for more than 1500 microRNAs.
Nucleic Acids Res., 2021

2020
DIANA-LncBase v3: indexing experimentally supported miRNA targets on non-coding transcripts.
Nucleic Acids Res., 2020

DiS-TSS: An Annotation Agnostic Algorithm for TSS Identification.
Proceedings of the Bioinformatics and Biomedical Engineering, 2020

2018
DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA-gene interactions.
Nucleic Acids Res., 2018

ECCB 2018: The 17th European Conference on Computational Biology.
Bioinform., 2018

2016
DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data.
Nucleic Acids Res., 2016

DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts.
Nucleic Acids Res., 2016

DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators.
Nucleic Acids Res., 2016

2015
DIANA-miRPath v3.0: deciphering microRNA function with experimental support.
Nucleic Acids Res., 2015

DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA: mRNA interactions.
Nucleic Acids Res., 2015

mirPub: a database for searching microRNA publications.
Bioinform., 2015

TarMiner: automatic extraction of miRNA targets from literature.
Proceedings of the 27th International Conference on Scientific and Statistical Database Management, 2015

MirPub v2: Towards Ranking and Refining miRNA Publication Search Results.
Proceedings of the Research and Advanced Technology for Digital Libraries, 2015

2014
Publishing Diachronic Life Science Linked Data.
Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2014

MR-microT: a MapReduce-based MicroRNA target prediction method.
Proceedings of the Conference on Scientific and Statistical Database Management, 2014

2013
DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows.
Nucleic Acids Res., 2013

DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs.
Nucleic Acids Res., 2013

2012
DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways.
Nucleic Acids Res., 2012

TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support.
Nucleic Acids Res., 2012

Functional microRNA targets in protein coding sequences.
Bioinform., 2012

Publishing life science data as linked open data: the case study of miRBase.
Proceedings of the International Workshop on Open Data, 2012

TARCLOUD: A Cloud-Based Platform to Support miRNA Target Prediction.
Proceedings of the Scientific and Statistical Database Management, 2012

2011
DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association.
Nucleic Acids Res., 2011

2010
miRGen 2.0: a database of microRNA genomic information and regulation.
Nucleic Acids Res., 2010

FreePub: Collecting and Organizing Scientific Material Using Mindmaps.
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2010

Predicting miRNA targets utilizing an Extended Profile HMM.
Proceedings of the German Conference on Bioinformatics 2010, 2010

2009
The database of experimentally supported targets: a functional update of TarBase.
Nucleic Acids Res., 2009

DIANA-microT web server: elucidating microRNA functions through target prediction.
Nucleic Acids Res., 2009

Accurate microRNA target prediction correlates with protein repression levels.
BMC Bioinform., 2009

DIANA-mirPath: Integrating human and mouse microRNAs in pathways.
Bioinform., 2009

Lost in translation: an assessment and perspective for computational microRNA target identification.
Bioinform., 2009

2007
Global Discriminative Learning for Higher-Accuracy Computational Gene Prediction.
PLoS Comput. Biol., 2007

miRGen: a database for the study of animal microRNA genomic organization and function.
Nucleic Acids Res., 2007

2006
Support Vector Machines for Predicting microRNA Hairpins.
Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, 2006

Simple Methods of Finding Short Protein Coding Sequences.
Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, 2006

2005
Computational Identification of Regulatory Factors Involved in MicroRNA Transcription.
Proceedings of the Advances in Informatics, 2005

2002
Artificial Neural Networks Based Systems for Recognition of Genomic Signals and Regions: A Review.
Informatica (Slovenia), 2002

Translation initiation start prediction in human cDNAs with high accuracy.
Bioinform., 2002

Finding Signal Peptides in Human Protein Sequences Using Recurrent Neural Networks.
Proceedings of the Algorithms in Bioinformatics, Second International Workshop, 2002

2001
DIANA-EST: a statistical analysis.
Bioinform., 2001

2000
Prediction of human transnational initiation sites using a multiple neural network approach.
Int. J. Comput. Syst. Signals, 2000

Translation Initiation Site Prediction in Eucariotic MRNAs with High Accuracy.
Proceedings of the German Conference on Bioinformatics (GCB 2000), 2000

1999
Feature recognition on expressed sequence tags of human DNA.
Proceedings of the International Joint Conference Neural Networks, 1999

1996
Computational analysis of transcriptional regulatory elements: a field in flux.
Comput. Appl. Biosci., 1996

Detection of Eukaryotic POL II Promoters with Multi-State Time-Delay Neural Networks.
Proceedings of the German Conference on Bioinformatics, 1996

1995
A parallel neural network simulator on the connection machine CM-5.
Comput. Appl. Biosci., 1995


  Loading...