Paul T. Spellman

According to our database1, Paul T. Spellman authored at least 30 papers between 2001 and 2021.

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Bibliography

2021
Causal interactions from proteomic profiles: Molecular data meet pathway knowledge.
Patterns, 2021

2020
The evolutionary history of 2,658 cancers.
Nat., 2020

2015
Stacked Predictive Sparse Decomposition for Classification of Histology Sections.
Int. J. Comput. Vis., 2015

Predictive sparse morphometric context for classification of histology sections.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

2014
Classification of Histology Sections via Multispectral Convolutional Sparse Coding.
Proceedings of the 2014 IEEE Conference on Computer Vision and Pattern Recognition, 2014

2013
Invariant Delineation of Nuclear Architecture in Glioblastoma Multiforme for Clinical and Molecular Association.
IEEE Trans. Medical Imaging, 2013

Methods and challenges in timing chromosomal abnormalities within cancer samples.
Bioinform., 2013

Characterization of Tissue Histopathology via Predictive Sparse Decomposition and Spatial Pyramid Matching.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Classification of tumor histopathology via sparse feature learning.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Stacked Predictive Sparse Coding for Classification of Distinct Regions in Tumor Histopathology.
Proceedings of the IEEE International Conference on Computer Vision, 2013

Classification of Tumor Histology via Morphometric Context.
Proceedings of the 2013 IEEE Conference on Computer Vision and Pattern Recognition, 2013

2012
Multireference Level Set for the Characterization of Nuclear Morphology in Glioblastoma Multiforme.
IEEE Trans. Biomed. Eng., 2012

Integrating biological knowledge into variable selection: an empirical Bayes approach with an application in cancer biology.
BMC Bioinform., 2012

Bayesian Inference of Signaling Network Topology in a Cancer Cell Line.
Bioinform., 2012

Learning invariant features of tumor signatures.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Molecular bases of morphometric composition in Glioblastoma multiforme.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Batch-invariant nuclear segmentation in whole mount histology sections.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
Morphometic analysis of TCGA glioblastoma multiforme.
BMC Bioinform., 2011

Parent-specific copy number in paired tumor-normal studies using circular binary segmentation.
Bioinform., 2011

Comparison of sparse coding and kernel methods for histopathological classification of gliobastoma multiforme.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

2010
Prediction of epigenetically regulated genes in breast cancer cell lines.
BMC Bioinform., 2010

2009
GenomeGraphs: integrated genomic data visualization with R.
BMC Bioinform., 2009

Sparse combinatorial inference with an application in cancer biology.
Bioinform., 2009

A single-sample method for normalizing and combining full-resolution copy numbers from multiple platforms, labs and analysis methods.
Bioinform., 2009

2007
Spectral Decomposition of Signaling Networks.
Proceedings of the 2007 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2007

2006
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB.
BMC Bioinform., 2006

2005
A Status Report on Mage.
Bioinform., 2005

2002
An open letter to the scientific journals.
Bioinform., 2002

2001
The Stanford Microarray Database.
Nucleic Acids Res., 2001

Editorial: The Future of Publishing Microarray Data.
Briefings Bioinform., 2001


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