Sayoni Das

According to our database, Sayoni Das authored at least 14 papers between 2014 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Systematic indication extension for drugs using patient stratification insights generated by combinatorial analytics.

Sayoni Das, Krystyna Taylor, Simon Beaulah, Steve Gardner

Patterns, 2022

2021

Combinatorial Analysis of Phenotypic and Clinical Risk Factors Associated With Hospitalized COVID-19 Patients.

Sayoni Das, Matthew Pearson, Krystyna Taylor, Veronique Bouchet, Gert Lykke Møller, Taryn O. Hall, Mark Strivens, Kathy T. H. Tzeng, Steve Gardner

Frontiers Digit. Health, 2021

CATH functional families predict functional sites in proteins.

Sayoni Das, Harry M. Scholes, Neeladri Sen, Christine A. Orengo

Bioinform., 2021

2020

PDBe-KB: a community-driven resource for structural and functional annotations.

Mihaly Varadi, John M. Berrisford, Mandar S. Deshpande, Sreenath Nair, Aleksandras Gutmanas, David R. Armstrong, Lukás Pravda, Bissan Al-Lazikani, Stephen Anyango, Geoffrey J. Barton, Karel Berka, Tom L. Blundell, Neera Borkakoti, Jose M. Dana, Sayoni Das, Sucharita Dey, Patrizio Di Micco, Franca Fraternali, Toby J. Gibson, Manuela Helmer-Citterich, David Hoksza, Liang-Chin Huang, Rishabh Jain, Harry Jubb, Christos C. Kannas, Natarajan Kannan, Jaroslav Koca, Radoslav Krivák, Manjeet Kumar, Emmanuel D. Levy, Fábio Madeira, M. S. Madhusudhan, Henry J. Martell, Stuart A. MacGowan, Jake E. McGreig, Saqib Mir, Abhik Mukhopadhyay, Luca Parca, Typhaine Paysan-Lafosse, Leandro G. Radusky, António J. M. Ribeiro, Luis Serrano, Ian Sillitoe, Gulzar Singh, Petr Skoda, Radka Svobodová Vareková, Jonathan D. Tyzack, Alfonso Valencia, Eloy D. Villasclaras-Fernández, Wim F. Vranken, Mark N. Wass, Janet M. Thornton, Michael J. E. Sternberg, Christine A. Orengo, Sameer Velankar

Nucleic Acids Res., 2020

2019

Protein Structure Classification.

Natalie L. Dawson, Sayoni Das, Jonathan G. Lees, Christine A. Orengo

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

CATH: expanding the horizons of structure-based functional annotations for genome sequences.

Ian Sillitoe, Natalie L. Dawson, Tony E. Lewis, Sayoni Das, Jonathan G. Lees, Paul Ashford, Adeyelu Tolulope, Harry M. Scholes, Ilya Senatorov, Andra Bujan, Fatima Ceballos Rodriguez-Conde, Benjamin Dowling, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2019

2017

CATH: an expanded resource to predict protein function through structure and sequence.

Natalie L. Dawson, Tony E. Lewis, Sayoni Das, Jonathan G. Lees, David A. Lee, Paul Ashford, Christine A. Orengo, Ian Sillitoe

Nucleic Acids Res., 2017

2016

Novel Computational Protocols for Functionally Classifying and Characterising Serine Beta-Lactamases.

David A. Lee, Sayoni Das, Natalie L. Dawson, Dragana Dobrijevic, John Ward, Christine A. Orengo

PLoS Comput. Biol., 2016

Gene3D: expanding the utility of domain assignments.

Su Datt Lam, Natalie L. Dawson, Sayoni Das, Ian Sillitoe, Paul Ashford, David A. Lee, Sonja Lehtinen, Christine A. Orengo, Jonathan G. Lees

Nucleic Acids Res., 2016

2015

Highlights from the 1st Student Symposium on Computational Biology and Life Sciences, organised by ISCB Regional Student Group, UK.

Farzana Rahman, Rohit Farmer, Sayoni Das, Fatima Vayani, Mehedi Hassan

PeerJ Prepr., 2015

CATH: comprehensive structural and functional annotations for genome sequences.

Ian Sillitoe, Tony E. Lewis, Alison L. Cuff, Sayoni Das, Paul Ashford, Natalie L. Dawson, Nicholas Furnham, Roman A. Laskowski, David A. Lee, Jonathan G. Lees, Sonja Lehtinen, Romain A. Studer, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2015

CATH FunFHMMer web server: protein functional annotations using functional family assignments.

Sayoni Das, Ian Sillitoe, David A. Lee, Jonathan G. Lees, Natalie L. Dawson, John Ward, Christine A. Orengo

Nucleic Acids Res., 2015

Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.

Sayoni Das, David A. Lee, Ian Sillitoe, Natalie L. Dawson, Jonathan G. Lees, Christine A. Orengo

Bioinform., 2015

2014

Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis.

Jonathan G. Lees, David A. Lee, Romain A. Studer, Natalie L. Dawson, Ian Sillitoe, Sayoni Das, Corin Yeats, Benoit H. Dessailly, Robert Rentzsch, Christine A. Orengo

Nucleic Acids Res., 2014