Alison L. Cuff

According to our database, Alison L. Cuff authored at least 9 papers between 2006 and 2015.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2015

CATH: comprehensive structural and functional annotations for genome sequences.

Ian Sillitoe, Tony E. Lewis, Alison L. Cuff, Sayoni Das, Paul Ashford, Natalie L. Dawson, Nicholas Furnham, Roman A. Laskowski, David A. Lee, Jonathan G. Lees, Sonja Lehtinen, Romain A. Studer, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2015

2013

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures.

Ian Sillitoe, Alison L. Cuff, Benoit H. Dessailly, Natalie L. Dawson, Nicholas Furnham, David A. Lee, Jonathan G. Lees, Tony E. Lewis, Romain A. Studer, Robert Rentzsch, Corin Yeats, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2013

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.

Tony E. Lewis, Ian Sillitoe, Antonina Andreeva, Tom L. Blundell, Daniel W. A. Buchan, Cyrus Chothia, Alison L. Cuff, Jose M. Dana, Ioannis Filippis, Julian Gough, Sarah Hunter, David T. Jones, Lawrence A. Kelley, Gerard J. Kleywegt, Federico Minneci, Alex L. Mitchell, Alexey G. Murzin, Bernardo Ochoa-Montaño, Owen J. L. Rackham, James Smith, Michael J. E. Sternberg, Sameer Velankar, Corin Yeats, Christine A. Orengo

Nucleic Acids Res., 2013

2012

Exploring the Evolution of Novel Enzyme Functions within Structurally Defined Protein Superfamilies.

Nicholas Furnham, Ian Sillitoe, Gemma L. Holliday, Alison L. Cuff, Roman A. Laskowski, Christine A. Orengo, Janet M. Thornton

PLoS Comput. Biol., 2012

FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies.

Nicholas Furnham, Ian Sillitoe, Gemma L. Holliday, Alison L. Cuff, Syed Asad Rahman, Roman A. Laskowski, Christine A. Orengo, Janet M. Thornton

Nucleic Acids Res., 2012

2011

Extending CATH: increasing coverage of the protein structure universe and linking structure with function.

Alison L. Cuff, Ian Sillitoe, Tony E. Lewis, Andrew B. Clegg, Robert Rentzsch, Nicholas Furnham, Marialuisa Pellegrini-Calace, David T. Jones, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2011

2009

The CATH classification revisited - architectures reviewed and new ways to characterize structural divergence in superfamilies.

Alison L. Cuff, Ian Sillitoe, Tony E. Lewis, Oliver Redfern, Richard Garratt, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2009

2007

The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution.

Lesley H. Greene, Tony E. Lewis, Sarah Addou, Alison L. Cuff, Timothy Dallman, Mark Dibley, Oliver Redfern, Frances M. G. Pearl, Rekha Nambudiry, Adam James Reid, Ian Sillitoe, Corin Yeats, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2007

2006

Analysing the ability to retain sidechain hydrogen-bonds in mutant proteins.

Alison L. Cuff, Robert W. Janes, Andrew C. R. Martin

Bioinform., 2006