Roman A. Laskowski

According to our database1, Roman A. Laskowski authored at least 27 papers between 1998 and 2020.

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Bibliography

2020
MGOS: A library for molecular geometry and its operating system.
Comput. Phys. Commun., 2020

An automated protocol for modelling peptide substrates to proteases.
BMC Bioinform., 2020

2019
VarMap: a web tool for mapping genomic coordinates to protein sequence and structure and retrieving protein structural annotations.
Bioinform., 2019

2016
BetaSCPWeb: side-chain prediction for protein structures using Voronoi diagrams and geometry prioritization.
Nucleic Acids Res., 2016

2015
CATH: comprehensive structural and functional annotations for genome sequences.
Nucleic Acids Res., 2015

BetaCavityWeb: a webserver for molecular voids and channels.
Nucleic Acids Res., 2015

2014
PDBsum additions.
Nucleic Acids Res., 2014

Anatomy of enzyme channels.
BMC Bioinform., 2014

2013
Amino Acid Changes in Disease-Associated Variants Differ Radically from Variants Observed in the 1000 Genomes Project Dataset.
PLoS Comput. Biol., 2013

2012
Exploring the Evolution of Novel Enzyme Functions within Structurally Defined Protein Superfamilies.
PLoS Comput. Biol., 2012

FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies.
Nucleic Acids Res., 2012

2011
LigPlot+: Multiple Ligand-Protein Interaction Diagrams for Drug Discovery.
J. Chem. Inf. Model., 2011

2010
ArchSchema: a tool for interactive graphing of related Pfam domain architectures.
Bioinform., 2010

2009
Predicting Protein Ligand Binding Sites by Combining Evolutionary Sequence Conservation and 3D Structure.
PLoS Comput. Biol., 2009

PDBsum new things.
Nucleic Acids Res., 2009

WSsas: a web service for the annotation of functional residues through structural homologues.
Bioinform., 2009

2007
Variation of geometrical and physicochemical properties in protein binding pockets and their ligands.
BMC Bioinform., 2007

Enhancing the functional annotation of PDB structures in PDBsum using key figures extracted from the literature.
Bioinform., 2007

2005
ProFunc: a server for predicting protein function from 3D structure.
Nucleic Acids Res., 2005

PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids.
Nucleic Acids Res., 2005

2002
Detecting cryptically simple protein sequences using the SIMPLE algorithm.
Bioinform., 2002

2001
Amino acid?base interactions: a three-dimensional analysis of protein?DNA interactions at an atomic level.
Nucleic Acids Res., 2001

PDBsum: summaries and analyses of PDB structures.
Nucleic Acids Res., 2001

1999
BLEEP - potential of mean force describing protein-ligand interactions: I. Generating potential.
J. Comput. Chem., 1999

BLEEP - potential of mean force describing protein-ligand interactions: II. Calculation of binding energies and comparison with experimental data.
J. Comput. Chem., 1999

1998
Dihydrofolate reductase: A potential drug target in trypanosomes and leishmania.
J. Comput. Aided Mol. Des., 1998

[Invited Lecture] Protein Folds and Functions.
Proceedings of the German Conference on Bioinformatics, 1998


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