Daniel Schober

According to our database, Daniel Schober authored at least 28 papers between 2005 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

FAIR Computational Workflows.

Carole A. Goble, Sarah Cohen-Boulakia, Stian Soiland-Reyes, Daniel Garijo, Yolanda Gil, Michael R. Crusoe, Kristian Peters, Daniel Schober

Data Intell., 2020

2019

Interoperable and scalable data analysis with microservices: applications in metabolomics.

Payam Emami Khoonsari, Pablo A. Moreno, Sven Bergmann, Joachim Burman, Marco Capuccini, Matteo Carone, Marta Cascante, Pedro de Atauri, Carles Foguet, Alejandra N. González-Beltrán, Thomas Hankemeier, Kenneth Haug, Sijin He, Stephanie Herman, David Johnson, Namrata Kale, Anders Larsson, Steffen Neumann, Kristian Peters, Luca Pireddu, Philippe Rocca-Serra, Pierrick Roger, Rico Rueedi, Christoph Ruttkies, Noureddin Sadawi, Reza M. Salek, Susanna-Assunta Sansone, Daniel Schober, Vitaly A. Selivanov, Etienne A. Thévenot, Michael van Vliet, Gianluigi Zanetti, Christoph Steinbeck, Kim Kultima, Ola Spjuth

Bioinform., 2019

2017

The future of metabolomics in ELIXIR.

Merlijn N. van Rijswijk, Charlie Beirnaert, Christophe Caron, Marta Cascante, Victoria Dominguez Del Angel, Warwick B. Dunn, Timothy M. D. Ebbels, Franck Giacomoni, Alejandra N. González-Beltrán, Thomas Hankemeier, Kenneth Haug, Jose L. Izquierdo-García, Rafael C. Jiménez, Fabien Jourdan, Namrata Kale, Maria I. Klapa, Oliver Kohlbacher, Kairi Koort, Kim Kultima, Gildas Le Corguillé, Nicholas K. Moschonas, Steffen Neumann, Claire O'Donovan, Martin Reczko, Philippe Rocca-Serra, Antonio Rosato, Reza M. Salek, Susanna-Assunta Sansone, Venkata P. Satagopam, Daniel Schober, Ruth Shimmo, Rachel A. Spicer, Ola Spjuth, Etienne A. Thévenot, Mark R. Viant, Ralf J. M. Weber, Egon L. Willighagen, Gianluigi Zanetti, Christoph Steinbeck

F1000Research, 2017

2016

Towards standardized evidence descriptors for metabolite annotations.

Daniel Schober, Reza M. Salek, Steffen Neumann

Proceedings of the 7th Workshop on Ontologies and Data in Life Sciences, 2016

2014

DebugIT: Ontology-mediated Layered Data Integration for Real-time Antibiotics Resistance Surveillance.

Daniel Schober, Rémy Choquet, Kristof Depraetere, Frank Enders, Philipp Daumke, Marie-Christine Jaulent, Douglas Teodoro, Emilie Pasche, Christian Lovis, Martin Boeker

Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2014

2013

Ontological analysis of controlled vocabularies used in PSI/MSI supported XML standards.

Daniel Schober, Gerhard Mayer, Annick Moing, Martin Eisenacher, Steffen Neumann

Proceedings of the 43. Jahrestagung der Gesellschaft für Informatik, 2013

Measuring the Effect of a Guideline-based Training on Ontology Design with a Competency Questions based Evaluation Approach.

Martin Boeker, Niels Grewe, Johannes Röhl, Daniel Schober, Stefan Schulz, Djamila Seddig-Raufie, Ludger Jansen

Proceedings of the 43. Jahrestagung der Gesellschaft für Informatik, 2013

2012

Proposed actions are no actions: re-modeling an ontology design pattern with a realist top-level ontology.

Djamila Seddig-Raufie, Ludger Jansen, Daniel Schober, Martin Boeker, Niels Grewe, Stefan Schulz

J. Biomed. Semant., 2012

OntoCheck: verifying ontology naming conventions and metadata completeness in Protégé 4.

Daniel Schober, Ilinca Tudose, Vojtech Svátek, Martin Boeker

J. Biomed. Semant., 2012

Towards an ontological representation of morbidity and mortality in Description Logics.

Filipe Santana, Fred Freitas, Roberta Fernandes, Zulma Medeiros, Daniel Schober

J. Biomed. Semant., 2012

Checking Class Labels against Naming Conventions: First experiences with the OntoCheck Protégé plugin.

Daniel Schober, Vojtech Svátek, Martin Boeker

Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

Teaching Good Biomedical Ontology Design.

Martin Boeker, Daniel Schober, Djamila Raufie, Niels Grewe, Johannes Röhl, Ludger Jansen, Stefan Schulz

Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

2011

Unintended consequences of existential quantifications in biomedical ontologies.

Martin Boeker, Ilinca Tudose, Janna Hastings, Daniel Schober, Stefan Schulz

BMC Bioinform., 2011

Ontology patterns for tabular representations of biomedical knowledge on neglected tropical diseases.

Filipe Santana, Daniel Schober, Zulma Medeiros, Fred Freitas, Stefan Schulz

Bioinform., 2011

Overcoming the ontology enrichment bottleneck with Quick Term Templates.

Philippe Rocca-Serra, Alan Ruttenberg, Martin J. O'Connor, Patricia L. Whetzel, Daniel Schober, Jay Greenbaum, Mélanie Courtot, Ryan Remy Brinkman, Susanna-Assunta Sansone, Richard H. Scheuermann, Bjoern Peters

Appl. Ontology, 2011

MIREOT: The minimum information to reference an external ontology term.

Mélanie Courtot, Frank Gibson, Allyson L. Lister, James Malone, Daniel Schober, Ryan Remy Brinkman, Alan Ruttenberg

Appl. Ontology, 2011

A T-Box Generator for Testing Scalability of OWL Mereotopological Patterns.

Martin Boeker, Janna Hastings, Daniel Schober, Stefan Schulz

Proceedings of the 8th International Workshop on OWL: Experiences and Directions (OWLED 2011), 2011

Interoperability Driven Integration of Biomedical Data Sources.

Douglas Teodoro, Rémy Choquet, Daniel Schober, Giovanni Mels, Emilie Pasche, Patrick Ruch, Christian Lovis

Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011

2010

Developing DCO: The DebugIT core ontology for antibiotics resistence modelling.

Daniel Schober, Martin Boeker, Stefan Schulz, Ilinca Tudose

Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, 2010

Bridging the semantics gap between terminologies, ontologies, and information models.

Stefan Schulz, Daniel Schober, Christel Daniel, Marie-Christine Jaulent

Proceedings of the MEDINFO 2010, 2010

The DebugIT Core Ontology: semantic integration of antibiotics resistance patterns.

Daniel Schober, Martin Boeker, Jessica Bullenkamp, Csaba Huszka, Kristof Depraetere, Douglas Teodoro, Nadia Nadah, Rémy Choquet, Christel Daniel, Stefan Schulz

Proceedings of the MEDINFO 2010, 2010

Ensuring HL7-based information model requirements within an ontology framework.

David Ouagne, Nadia Nadah, Daniel Schober, Rémy Choquet, Douglas Teodoro, Dirk Colaert, Stefan Schulz, Marie-Christine Jaulent, Christel Daniel

Proceedings of the MEDINFO 2010, 2010

2009

Survey-based naming conventions for use in OBO Foundry ontology development.

Daniel Schober, Barry Smith, Suzanna E. Lewis, Waclaw Kusnierczyk, Jane Lomax, Chris Mungall, Chris F. Taylor, Philippe Rocca-Serra, Susanna-Assunta Sansone

BMC Bioinform., 2009

2008

Facilitating the development of controlled vocabularies for metabolomics technologies with text mining.

Irena Spasic, Daniel Schober, Susanna-Assunta Sansone, Dietrich Rebholz-Schuhmann, Douglas B. Kell, Norman W. Paton

BMC Bioinform., 2008

The OWL of Biomedical Investigations.

Mélanie Courtot, William J. Bug, Frank Gibson, Allyson L. Lister, James Malone, Daniel Schober, Ryan Remy Brinkman, Alan Ruttenberg

Proceedings of the Fifth OWLED Workshop on OWL: Experiences and Directions, 2008

2006

Ein Repräsentationsformat zur standardisierten Beschreibung und wissensbasierten Modellierung genomischer Expressionsdaten

Daniel Schober

PhD thesis, 2006

Towards a Reference Terminology for Ontology Research and Development in the Biomedical Domain.

Barry Smith, Waclaw Kusnierczyk, Daniel Schober, Werner Ceusters

Proceedings of the KR-MED 2006, 2006

2005

GandrKB--ontological microarray annotation and visualization.

Daniel Schober, Ulf Leser, Martin Zenke, Jens G. Reich

Bioinform., 2005