Damian Smedley

Orcid: 0000-0002-5836-9850

According to our database1, Damian Smedley authored at least 49 papers between 2004 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of two.

Timeline

Legend:

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In proceedings 
Article 
PhD thesis 
Dataset
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Links

On csauthors.net:

Bibliography

2023
The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease.
Nucleic Acids Res., January, 2023

2022
PheneBank: a literature-based database of phenotypes.
Bioinform., 2022

Evaluation of phenotype-driven gene prioritization methods for Mendelian diseases.
Briefings Bioinform., 2022

2021
Diffusion enables integration of heterogeneous data and user-driven learning in a desktop knowledge-base.
PLoS Comput. Biol., 2021

The Human Phenotype Ontology in 2021.
Nucleic Acids Res., 2021

2020
PheneBank: Processed Medline Abstracts and PMC full articles + Phenotype-Disease Associations.
Dataset, July, 2020

PheneBank: Processed Medline Abstracts and PMC full articles + Phenotype-Disease Associations.
Dataset, July, 2020

Incremental data integration for tracking genotype-disease associations.
PLoS Comput. Biol., 2020

Whole-genome sequencing of patients with rare diseases in a national health system.
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Nat., 2020

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species.
Nucleic Acids Res., 2020

Soft windowing application to improve analysis of high-throughput phenotyping data.
Bioinform., 2020

2019
Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources.
Nucleic Acids Res., 2019

2018
PheneBank: Processed Medline Abstracts and PMC full articles.
Dataset, February, 2018

PheneBank: Processed Medline Abstracts and PMC full articles.
Dataset, February, 2018

PheneBank: Processed Medline Abstracts and PMC full articles.
Dataset, February, 2018

PheneBank: Processed Medline Abstracts.
Dataset, February, 2018

2017
The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species.
Nucleic Acids Res., 2017

The Human Phenotype Ontology in 2017.
Nucleic Acids Res., 2017

2015
The BioMart community portal: an innovative alternative to large, centralized data repositories.
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Nucleic Acids Res., 2015

Linking gene expression to phenotypes via pathway information.
J. Biomed. Semant., 2015

Automatic concept recognition using the Human Phenotype Ontology reference and test suite corpora.
Database J. Biol. Databases Curation, 2015

PhenoMiner: from text to a database of phenotypes associated with OMIM diseases.
Database J. Biol. Databases Curation, 2015

2014
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Nucleic Acids Res., 2014

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data.
Nucleic Acids Res., 2014

The influence of disease categories on gene candidate predictions from model organism phenotypes.
J. Biomed. Semant., 2014

Walking the interactome for candidate prioritization in exome sequencing studies of Mendelian diseases.
Bioinform., 2014

Using association rule mining to determine promising secondary phenotyping hypotheses.
Bioinform., 2014

Linking tissues to phenotypes using gene expression profiles.
Database J. Biol. Databases Curation, 2014

2013
PhenoDigm: analyzing curated annotations to associate animal models with human diseases.
Database J. Biol. Databases Curation, 2013

2012
CreZOO - the European virtual repository of Cre and other targeted conditional driver strains.
Database J. Biol. Databases Curation, 2012

2011
The IKMC web portal: a central point of entry to data and resources from the International Knockout Mouse Consortium.
Nucleic Acids Res., 2011

BioMart as an integration solution for the International Knockout Mouse Consortium.
Database J. Biol. Databases Curation, 2011

BioMart Central Portal: an open database network for the biological community.
Database J. Biol. Databases Curation, 2011

Towards BioDBcore: a community-defined information specification for biological databases.
Database J. Biol. Databases Curation, 2011

2010
EMMA - mouse mutant resources for the international scientific community.
Nucleic Acids Res., 2010

Ensembl's 10th year.
Nucleic Acids Res., 2010

Mouse Resource Browser - a database of mouse databases.
Database J. Biol. Databases Curation, 2010

Finding and sharing: new approaches to registries of databases and services for the biomedical sciences.
Database J. Biol. Databases Curation, 2010

2009
Ensembl 2009.
Nucleic Acids Res., 2009

BioMart Central Portal - unified access to biological data.
Nucleic Acids Res., 2009

Models for financial sustainability of biological databases and resources.
Database J. Biol. Databases Curation, 2009

2008
Ensembl 2008.
Nucleic Acids Res., 2008

Solutions for data integration in functional genomics: a critical assessment and case study.
Briefings Bioinform., 2008

Towards dynamic database infrastructures for mouse genetics.
Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

CASIMIR: Coordination and Sustainability of International Mouse Informatics Resources.
Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

2007
Ensembl 2007.
Nucleic Acids Res., 2007

2006
Ensembl 2006.
Nucleic Acids Res., 2006

2005
Ensembl 2005.
Nucleic Acids Res., 2005

2004
Ensembl 2004.
Nucleic Acids Res., 2004


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