Patrick S. Schnable

According to our database, Patrick S. Schnable authored at least 28 papers between 2004 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

3D reconstruction of plants using probabilistic voxel carving.

Jiale Feng, Mojdeh Saadati, Talukder Z. Jubery, Anushrut Jignasu, Aditya Balu, Yawei Li, Lakshmi Attigala, Patrick S. Schnable, Soumik Sarkar, Baskar Ganapathysubramanian, Adarsh Krishnamurthy

Comput. Electron. Agric., October, 2023

Field-based robotic leaf angle detection and characterization of maize plants using stereo vision and deep convolutional neural networks.

Lirong Xiang, Jingyao Gai, Yin Bao, Jianming Yu, Patrick S. Schnable, Lie Tang

J. Field Robotics, August, 2023

2022

Ten simple rules to ruin a collaborative environment.

Carolyn J. Lawrence-Dill, Robyn L. Allscheid, Albert Boaitey, Todd Bauman, Edward S. Buckler IV, Jennifer L. Clarke, Christopher Cullis, Jack Dekkers, Cassandra J. Dorius, Shawn F. Dorius, David Ertl, Matthew Homann, Guiping Hu, Mary Losch, Eric Lyons, Brenda Murdoch, Zahra-Katy Navabi, Somashekhar Punnuri, Fahad Rafiq, James M. Reecy, Patrick S. Schnable, Nicole M. Scott, Moira Sheehan, Xavier Sirault, Margaret Staton, Christopher K. Tuggle, Alison Van Eenennaam, Rachael Voas

PLoS Comput. Biol., 2022

2021

Hyppo-X: A Scalable Exploratory Framework for Analyzing Complex Phenomics Data.

Methun Kamruzzaman, Ananth Kalyanaraman, Bala Krishnamoorthy, Stefan Hey, Patrick S. Schnable

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

ARA: A Wireless Living Lab Vision for Smart and Connected Rural Communities.

Hongwei Zhang, Yong Guan, Ahmed E. Kamal, Daji Qiao, Mai Zheng, Anish Arora, Ozdal Boyraz, Brian Cox, Thomas Daniels, Matthew J. Darr, Doug Jacobson, Ashfaq A. Khokhar, Sang Wu Kim, James Koltes, Jia Liu, Mike Luby, Larysa Nadolny, Joshua M. Peschel, Patrick S. Schnable, Anuj Sharma, Arun Somani, Lie Tang

Proceedings of the WiNTECH'21: Proceedings of the 15th ACM Workshop on Wireless Network Testbeds, 2021

A Measurement Study of TVWS Wireless Channels in Crop Farms.

Matthias Sander Frigau, Tianyi Zhang, Chen-Ye Lim, Hongwei Zhang, Ahmed E. Kamal, Arun K. Somani, Stefan Hey, Patrick S. Schnable

Proceedings of the IEEE 18th International Conference on Mobile Ad Hoc and Smart Systems, 2021

Pheno-mapper: an interactive toolbox for the visual exploration of phenomics data.

Youjia Zhou, Methun Kamruzzaman, Patrick S. Schnable, Bala Krishnamoorthy, Ananth Kalyanaraman, Bei Wang

Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021

2019

Field-based robotic phenotyping of sorghum plant architecture using stereo vision.

Yin Bao, Lie Tang, Matthew W. Breitzman, Maria G. Salas Fernandez, Patrick S. Schnable

J. Field Robotics, 2019

2018

An automated tassel detection and trait extraction pipeline to support high-throughput field imaging of maize.

Snehal Shete, Srikant Srinivasan, Seyed Vahid Mirnezami, Baskar Ganapathysubramanian, Patrick S. Schnable, Timothy A. Gonsalves

Proceedings of the ICVGIP 2018: 11th Indian Conference on Computer Vision, 2018

2017

Toward A Scalable Exploratory Framework for Complex High-Dimensional Phenomics Data.

Methun Kamruzzaman, Ananth Kalyanaraman, Bala Krishnamoorthy, Patrick S. Schnable

CoRR, 2017

Tracking of water movement dynamics inside plants using leaf surface humidity sensors.

Seval Oren, Zhaokui Wang, Xinran Wang, Shawana Tabassum, Yueyi Jiao, Byron J. Montgomery, Nathan M. Neihart, Colton M. McNinch, Patrick S. Schnable, Liang Dong

Proceedings of the 12th IEEE International Conference on Nano/Micro Engineered and Molecular Systems, 2017

2016

A Bayesian Network approach to County-Level Corn Yield Prediction using historical data and expert knowledge.

Vikas Chawla, Hsiang Sing Naik, Adedotun Akintayo, Dermot Hayes, Patrick S. Schnable, Baskar Ganapathysubramanian, Soumik Sarkar

CoRR, 2016

Algorithm for DNA copy number variation detection with read depth and paramorphism information.

Rong Shen, Kai Ying, Zhengdao Wang, Patrick S. Schnable

Proceedings of the 2016 IEEE International Conference on Acoustics, 2016

2011

An Efficient and Scalable Implementation of SNP-Pair Interaction Testing for Genetic Association Studies.

Lars Koesterke, Daniel Stanzione, Matthew W. Vaughn, Stephen M. Welch, Waclaw Kusnierczyk, Jinliang Yang, Cheng-Ting Yeh, Dan Nettleton, Patrick S. Schnable

Proceedings of the 25th IEEE International Symposium on Parallel and Distributed Processing, 2011

2010

Parallel de novo assembly of large genomes from high-throughput short reads.

Benjamin G. Jackson, Matthew Regennitter, Xiao Yang, Patrick S. Schnable, Srinivas Aluru

Proceedings of the 24th IEEE International Symposium on Parallel and Distributed Processing, 2010

2009

Parallel short sequence assembly of transcriptomes.

Benjamin G. Jackson, Patrick S. Schnable, Srinivas Aluru

BMC Bioinform., 2009

Direct calibration of PICKY-designed microarrays.

Hui-Hsien Chou, Arunee Trisiriroj, Sunyoung Park, Yue-Ie C. Hsing, Pamela C. Ronald, Patrick S. Schnable

BMC Bioinform., 2009

Assembly of Large Genomes from Paired Short Reads.

Benjamin G. Jackson, Patrick S. Schnable, Srinivas Aluru

Proceedings of the Bioinformatics and Computational Biology, 2009

2008

Consensus Genetic Maps as Median Orders from Inconsistent Sources.

Benjamin G. Jackson, Patrick S. Schnable, Srinivas Aluru

IEEE ACM Trans. Comput. Biol. Bioinform., 2008

Assessing probe-specific dye and slide biases in two-color microarray data.

Ruixiao Lu, Geun-Cheol Lee, Michael Shultz, Chris Dardick, Kihong Jung, Jirapa Phetsom, Yi Jia, Robert H. Rice, Zelanna Goldberg, Patrick S. Schnable, Pamela C. Ronald, David M. Rocke

BMC Bioinform., 2008

2007

Assembling genomes on large-scale parallel computers.

Anantharaman Kalyanaraman, Scott J. Emrich, Patrick S. Schnable, Srinivas Aluru

J. Parallel Distributed Comput., 2007

2006

Scanning microarrays at multiple intensities enhances discovery of differentially expressed genes.

David S. Skibbe, Xiujuan Wang, Xuefeng Zhao, Lisa A. Borsuk, Dan Nettleton, Patrick S. Schnable

Bioinform., 2006

2005

Using the biological taxonomy to access biological literature with PathBinderH.

Jing Ding, Karthikeyan Viswanathan, Daniel Berleant, Laron M. Hughes, Eve Syrkin Wurtele, Daniel A. Ashlock, Julie A. Dickerson, Andy W. Fulmer, Patrick S. Schnable

Bioinform., 2005

Consensus Genetic Maps: A Graph Theoretic Approach.

Benjamin G. Jackson, Srinivas Aluru, Patrick S. Schnable

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, 2005

Selection of Genetically Diverse Recombinant Inbreds with an Ordered Gene Evolutionary Algorithm.

Daniel A. Ashlock, Ruth Swanson, Patrick S. Schnable

Proceedings of the 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2005

2004

A strategy for assembling the maize (Zea mays L.) genome.

Scott J. Emrich, Srinivas Aluru, Yan Fu, Tsui-Jung Wen, Mahesh Narayanan, Ling Guo, Daniel A. Ashlock, Patrick S. Schnable

Bioinform., 2004

Picky: oligo microarray design for large genomes.

Hui-Hsien Chou, An-Ping Hsia, Denise L. Mooney, Patrick S. Schnable

Bioinform., 2004

A comparison of evolved finite state classifiers and interpolated Markov models for improving PCR primer design.

Daniel A. Ashlock, Scott J. Emrich, Kenneth Mark Bryden, Steven M. Corns, Tsui-Jung Wen, Patrick S. Schnable

Proceedings of the 2004 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2004