Rui Alves

According to our database1, Rui Alves authored at least 36 papers between 2000 and 2021.

Collaborative distances:



In proceedings 
PhD thesis 




Design and Implementation of a Wind Farm Controller Using Aerodynamics Estimated From LIDAR Scans of Wind Turbine Blades.
IEEE Control. Syst. Lett., 2021

EasyModel: user-friendly tool for building and analysis of simple mathematical models in systems biology.
Bioinform., 2020

Extending Heterogeneous Applications to Remote Co-processors with rOpenCL.
Proceedings of the 32nd IEEE International Symposium on Computer Architecture and High Performance Computing, 2020

EasyModel 1.1: User-friendly Stochastic and Deterministic Simulations for Systems Biology Models.
Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2020), 2020

MetReS, an Efficient Database for Genomic Applications.
J. Comput. Biol., 2018

Practices and Architectures for TSO-DSO Data Exchange: European Landscape.
Proceedings of the 2018 IEEE PES Innovative Smart Grid Technologies Conference Europe, 2018

Rare Disease Discovery: An Optimized Disease Ranking System.
IEEE Trans. Ind. Informatics, 2017

TControl: A mobile app to follow up tobacco-quitting patients.
Comput. Methods Programs Biomed., 2017

Gisplay- Extensible Web API for Thematic Maps with WebGL.
Proceedings of the Computational Science and Its Applications - ICCSA 2017, 2017

HBPF: a Home Blood Pressure Framework with SLA guarantees to follow up hypertensive patients.
PeerJ Comput. Sci., 2016

Wind power curtailment optimization for day-ahead operational planning.
Proceedings of the IEEE PES Innovative Smart Grid Technologies Conference Europe, 2016

Ceiling and Threshold of PaaS Tools: The Role of Learnability in Tool Adoption.
Proceedings of the Human-Centered and Error-Resilient Systems Development, 2016

CheNER: a tool for the identification of chemical entities and their classes in biomedical literature.
J. Cheminformatics, 2015

The CHEMDNER corpus of chemicals and drugs and its annotation principles.
J. Cheminformatics, 2015

Gobal optimization of hybrid kinetic/FBA models via outer-approximation.
Comput. Chem. Eng., 2015

S-PC: An e-treatment application for management of smoke-quitting patients.
Comput. Methods Programs Biomed., 2014

CheNER: chemical named entity recognizer.
Bioinform., 2014

The state of user experience evaluation practice.
Proceedings of the 8th Nordic Conference on Human-Computer Interaction: Fun, 2014

MetReS: A Metabolic Reconstruction Database for Cloud Computing.
Proceedings of the 2014 International Conference on Intelligent Networking and Collaborative Systems, 2014

Towards a measurement framework for tools' ceiling and threshold.
Proceedings of the ACM SIGCHI Symposium on Engineering Interactive Computing Systems, 2014

Identification of regulatory structure and kinetic parameters of biochemical networks via mixed-integer dynamic optimization.
BMC Syst. Biol., 2013

P-Biblio-MetReS, a parallel data mining tool for the reconstruction of molecular networks.
Proceedings of the 20th European MPI Users's Group Meeting, 2013

Towards a Taxonomy of Service Design Methods and Tools.
Proceedings of the Exploring Services Science - 4th International Conference, 2013

Resource Constrained Project Scheduling with General Precedence Relations Optimized with SAT.
Proceedings of the Progress in Artificial Intelligence, 2013

Improving software effort estimation with human-centric models: a comparison of UCP and iUCP accuracy.
Proceedings of the ACM SIGCHI Symposium on Engineering Interactive Computing Systems, 2013

Enwildering the lab: merging field evaluation with in-lab experience sampling.
Proceedings of the 2013 ACM SIGCHI Conference on Human Factors in Computing Systems, 2013

Augmenting Customer Journey Maps with quantitative empirical data: a case on EEG and eye tracking
CoRR, 2012

Steady-state global optimization of metabolic non-linear dynamic models through recasting into power-law canonical models.
BMC Syst. Biol., 2011

Biblio-MetReS: A bibliometric network reconstruction application and server.
BMC Bioinform., 2011

Minimization of Biosynthetic Costs in Adaptive Gene Expression Responses of Yeast to Environmental Changes.
PLoS Comput. Biol., 2010

In silico pathway reconstruction: Iron-sulfur cluster biogenesis in Saccharomyces cerevisiae.
BMC Syst. Biol., 2007

Use of physiological constraints to identify quantitative design principles for gene expression in yeast adaptation to heat shock.
BMC Bioinform., 2006

Coded PPM based modulations for infrared wlan's.
Proceedings of the IASTED International Conference on Advances in Computer Science and Technology, 2006

Systemic properties of ensembles of metabolic networks: application of graphical and statistical methods to simple unbranched pathways.
Bioinform., 2000

Comparing systemic properties of ensembles of biological networks by graphical and statistical methods.
Bioinform., 2000

Extending the method of mathematically controlled comparison to include numerical comparisons.
Bioinform., 2000