Sérgio Matos

According to our database1, Sérgio Matos authored at least 50 papers between 2006 and 2019.

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Bibliography

2019
Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
Database, 2019

Rule-based and Machine Learning Hybrid System for Patient Cohort Selection.
Proceedings of the 12th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2019), 2019

2018
Configurable web-services for biomedical document annotation.
J. Cheminformatics, 2018

SCREEN-DR: Collaborative platform for diabetic retinopathy.
I. J. Medical Informatics, 2018

SCREEN-DR - Software Architecture for the Diabetic Retinopathy Screening.
Proceedings of the Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth, 2018

Ejection Fraction Classification in Transthoracic Echocardiography Using a Deep Learning Approach.
Proceedings of the 31st IEEE International Symposium on Computer-Based Medical Systems, 2018

2017
An Intelligent Cloud Storage Gateway for Medical Imaging.
J. Medical Systems, 2017

Protein-Protein Interaction Article Classification Using a Convolutional Recurrent Neural Network with Pre-trained Word Embeddings.
J. Integrative Bioinformatics, 2017

Supervised Learning and Knowledge-Based Approaches Applied to Biomedical Word Sense Disambiguation.
J. Integrative Bioinformatics, 2017

An Intelligent Cloud Storage Gateway for Medical Imaging.
CoRR, 2017

Improving Document Prioritization for Protein-Protein Interaction Extraction Using Shallow Linguistics and Word Embeddings.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

Biomedical Word Sense Disambiguation with Word Embeddings.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

2016
Pattern recognition for cache management in distributed medical imaging environments.
Int. J. Comput. Assist. Radiol. Surg., 2016

Overview of the interactive task in BioCreative V.
Database, 2016

Mining clinical attributes of genomic variants through assisted literature curation in Egas.
Database, 2016

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.
Database, 2016

A Curation Pipeline and Web-Services for PDF Documents.
Proceedings of the 7th International Symposium on Semantic Mining in Biomedicine, 2016

Semantic Knowledge Base Construction from Radiology Reports.
Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2016), 2016

2015
The CHEMDNER corpus of chemicals and drugs and its annotation principles.
J. Cheminformatics, 2015

A document processing pipeline for annotating chemical entities in scientific documents.
J. Cheminformatics, 2015

An Overview of Biomolecular Event Extraction from Scientific Documents.
Comp. Math. Methods in Medicine, 2015

BioinformaticsUA: Machine Learning and Rule-Based Recognition of Disorders and Clinical Attributes from Patient Notes.
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015

Long-Term Prefetching for Cloud Medical Imaging Repositories.
Proceedings of the Digital Healthcare Empowering Europeans, 2015

A Semantic Layer for Unifying and Exploring Biomedical Document Curation Results.
Proceedings of the Bioinformatics and Biomedical Engineering, 2015

Ann2RDF: moving annotations to semantic web.
Proceedings of the 17th International Conference on Information Integration and Web-based Applications & Services, 2015

Incremental Learning Versus Batch Learning for Classification of User's Behaviour in Medical Imaging.
Proceedings of the HEALTHINF 2015, 2015

2014
TrigNER: automatically optimized biomedical event trigger recognition on scientific documents.
Source Code for Biology and Medicine, 2014

Computational prediction of the human-microbial oral interactome.
BMC Systems Biology, 2014

Egas: a collaborative and interactive document curation platform.
Database, 2014

BioinformaticsUA: Concept Recognition in Clinical Narratives Using a Modular and Highly Efficient Text Processing Framework.
Proceedings of the 8th International Workshop on Semantic Evaluation, 2014

Extracting Sentences Describing Biomolecular Events from the Biomedical Literature.
Proceedings of the Distributed Computing and Artificial Intelligence, 2014

2013
A modular framework for biomedical concept recognition.
BMC Bioinformatics, 2013

Gimli: open source and high-performance biomedical name recognition.
BMC Bioinformatics, 2013

BeCAS: biomedical concept recognition services and visualization.
Bioinformatics, 2013

Analysing Relevant Diseases from Iberian Tweets.
Proceedings of the 7th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2013

Predicting Flu Incidence from Portuguese Tweets.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

Computational Approach to Predict Inter-Species Oral Protein-Protein Interactions.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

Structuring and Exploring the Biomedical Literature Using Latent Semantics.
Proceedings of the Distributed Computing and Artificial Intelligence, 2013

2012
Harmonization of gene/protein annotations: towards a gold standard MEDLINE.
Bioinformatics, 2012

2011
Classification methods for finding articles describing protein-protein interactions in PubMed.
J. Integrative Bioinformatics, 2011

The gene normalization task in BioCreative III.
BMC Bioinformatics, 2011

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
BMC Bioinformatics, 2011

Prioritizing Literature Search Results Using a Training Set of Classified Documents.
Proceedings of the 5th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2011

2010
Concept-based query expansion for retrieving gene related publications from MEDLINE.
BMC Bioinformatics, 2010

Expanding Gene-Based PubMed Queries.
Proceedings of the Advances in Bioinformatics, 2010

Improving Cross Mapping in Biomedical Databases.
Proceedings of the Advances in Bioinformatics, 2010

Recognition of Gene/Protein Names using Conditional Random Fields.
Proceedings of the KDIR 2010, 2010

2009
Syntactic Parsing for Bio-molecular Event Detection from Scientific Literature.
Proceedings of the Progress in Artificial Intelligence, 2009

2007
An Automated System for 24-h Monitoring of Cough Frequency: The Leicester Cough Monitor.
IEEE Trans. Biomed. Engineering, 2007

2006
Detection of cough signals in continuous audio recordings using hidden Markov models.
IEEE Trans. Biomed. Engineering, 2006


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