Sérgio Matos
Orcid: 0000-0003-1941-3983Affiliations:
- University of Aveiro, Aveiro, Portugal
According to our database1,
Sérgio Matos
authored at least 85 papers
between 2006 and 2024.
Collaborative distances:
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Bibliography
2024
Proceedings of the Advances in Information Retrieval, 2024
Exploring efficient zero-shot synthetic dataset generation for Information Retrieval.
Proceedings of the Findings of the Association for Computational Linguistics: EACL 2024, 2024
2023
Study of NAD-interacting proteins highlights the extent of NAD regulatory roles in the cell and its potential as a therapeutic target.
J. Integr. Bioinform., July, 2023
Proceedings of the Progress in Artificial Intelligence, 2023
Exploring Kolmogorov Complexity Approximations for Data Analysis: Insights and Applications.
Proceedings of the Technological Innovation for Connected Cyber Physical Spaces, 2023
BIT.UA at MedProcNer: Discovering Medical Procedures in Spanish Using Transformer Models with MCRF and Augmentation.
Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), 2023
BIT.UA at BioASQ 11B: Two-Stage IR with Synthetic Training and Zero-Shot Answer Generation.
Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), 2023
2022
J. Biomed. Informatics, 2022
Chemical identification and indexing in PubMed full-text articles using deep learning and heuristics.
Database J. Biol. Databases Curation, 2022
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2022
Proceedings of the Pattern Recognition and Image Analysis - 10th Iberian Conference, 2022
Deep Learning solutions based on fixed contextualized embeddings from PubMedBERT on BioASQ 10b and traditional IR in Synergy.
Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to, 2022
Proceedings of the IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2022
2021
Pattern Recognit., 2021
A two-stage workflow to extract and harmonize drug mentions from clinical notes into observational databases.
J. Biomed. Informatics, 2021
Proceedings of the Public Health and Informatics, 2021
Proceedings of the 16th Conference of the European Chapter of the Association for Computational Linguistics: Main Volume, 2021
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021
Proceedings of the 34th IEEE International Symposium on Computer-Based Medical Systems, 2021
Bilingual Emotion Analysis on Social Media throughout the COVID19 Pandemic in Portugal.
Proceedings of the 14th International Joint Conference on Biomedical Engineering Systems and Technologies, 2021
2020
Statistical Complexity Analysis of Turing Machine tapes with Fixed Algorithmic Complexity Using the Best-Order Markov Model.
Entropy, 2020
Proceedings of the Twenty-Ninth Text REtrieval Conference, 2020
Proceedings of the Twenty-Ninth Text REtrieval Conference, 2020
Evaluating semantic textual similarity in clinical sentences using deep learning and sentence embeddings.
Proceedings of the SAC '20: The 35th ACM/SIGAPP Symposium on Applied Computing, online event, [Brno, Czech Republic], March 30, 2020
Proceedings of the SAC '20: The 35th ACM/SIGAPP Symposium on Applied Computing, online event, [Brno, Czech Republic], March 30, 2020
Clinical Concept Normalization on Medical Records Using Word Embeddings and Heuristics.
Proceedings of the Digital Personalized Health and Medicine - Proceedings of MIE 2020, Medical Informatics Europe, Geneva, Switzerland, April 28, 2020
Proceedings of the 1st Workshop on NLP for COVID-19@ EMNLP 2020, Online, December 2020, 2020
Proceedings of the Advances in Information Retrieval, 2020
Proceedings of the Advances in Information Retrieval, 2020
BIT.UA at BioASQ 8: Lightweight Neural Document Ranking with Zero-shot Snippet Retrieval.
Proceedings of the Working Notes of CLEF 2020, 2020
Leveraging Clinical Notes for Enhancing Decision-Making Systems with Relevant Patient Information.
Proceedings of the Biomedical Engineering Systems and Technologies, 2020
Enhancing Decision-making Systems with Relevant Patient Information by Leveraging Clinical Notes.
Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2020), 2020
2019
Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
Database J. Biol. Databases Curation, 2019
Extraction of chemical-protein interactions from the literature using neural networks and narrow instance representation.
Database J. Biol. Databases Curation, 2019
Proceedings of the 12th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2019), 2019
2018
J. Cheminformatics, 2018
Int. J. Medical Informatics, 2018
Proceedings of the Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth, 2018
Proceedings of the First International Conference on Data Science, 2018
Proceedings of the First International Conference on Data Science, 2018
Ejection Fraction Classification in Transthoracic Echocardiography Using a Deep Learning Approach.
Proceedings of the 31st IEEE International Symposium on Computer-Based Medical Systems, 2018
2017
Protein-Protein Interaction Article Classification Using a Convolutional Recurrent Neural Network with Pre-trained Word Embeddings.
J. Integr. Bioinform., 2017
Supervised Learning and Knowledge-Based Approaches Applied to Biomedical Word Sense Disambiguation.
J. Integr. Bioinform., 2017
Improving Document Prioritization for Protein-Protein Interaction Extraction Using Shallow Linguistics and Word Embeddings.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017
2016
Pattern recognition for cache management in distributed medical imaging environments.
Int. J. Comput. Assist. Radiol. Surg., 2016
Database J. Biol. Databases Curation, 2016
Mining clinical attributes of genomic variants through assisted literature curation in Egas.
Database J. Biol. Databases Curation, 2016
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.
Database J. Biol. Databases Curation, 2016
Proceedings of the 7th International Symposium on Semantic Mining in Biomedicine, 2016
Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2016), 2016
2015
J. Cheminformatics, 2015
A document processing pipeline for annotating chemical entities in scientific documents.
J. Cheminformatics, 2015
Comput. Math. Methods Medicine, 2015
BioinformaticsUA: Machine Learning and Rule-Based Recognition of Disorders and Clinical Attributes from Patient Notes.
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015
Proceedings of the Digital Healthcare Empowering Europeans, 2015
Proceedings of the Bioinformatics and Biomedical Engineering, 2015
Proceedings of the 17th International Conference on Information Integration and Web-based Applications & Services, 2015
Incremental Learning Versus Batch Learning for Classification of User's Behaviour in Medical Imaging.
Proceedings of the HEALTHINF 2015, 2015
2014
TrigNER: automatically optimized biomedical event trigger recognition on scientific documents.
Source Code Biol. Medicine, 2014
BMC Syst. Biol., 2014
Database J. Biol. Databases Curation, 2014
BioinformaticsUA: Concept Recognition in Clinical Narratives Using a Modular and Highly Efficient Text Processing Framework.
Proceedings of the 8th International Workshop on Semantic Evaluation, 2014
Proceedings of the Distributed Computing and Artificial Intelligence, 2014
2013
BMC Bioinform., 2013
Proceedings of the 7th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2013
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013
Proceedings of the Distributed Computing and Artificial Intelligence, 2013
2012
Bioinform., 2012
2011
Classification methods for finding articles describing protein-protein interactions in PubMed.
J. Integr. Bioinform., 2011
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
BMC Bioinform., 2011
Proceedings of the 5th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2011
2010
BMC Bioinform., 2010
Proceedings of the Advances in Bioinformatics, 2010
Proceedings of the Advances in Bioinformatics, 2010
Recognition of Gene/Protein Names using Conditional Random Fields.
Proceedings of the KDIR 2010, 2010
2009
Proceedings of the Progress in Artificial Intelligence, 2009
2007
An Automated System for 24-h Monitoring of Cough Frequency: The Leicester Cough Monitor.
IEEE Trans. Biomed. Eng., 2007
2006
Detection of cough signals in continuous audio recordings using hidden Markov models.
IEEE Trans. Biomed. Eng., 2006