Hong-Jie Dai

According to our database1, Hong-Jie Dai authored at least 62 papers between 2006 and 2019.

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Bibliography

2019
Classifying adverse drug reactions from imbalanced twitter data.
I. J. Medical Informatics, 2019

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
Database, 2019

Statistical principle-based approach for recognizing and normalizing microRNAs described in scientific literature.
Database, 2019

Depressive Symptoms and Functional Impairments Extraction From Electronic Health Records.
Proceedings of the 2019 International Conference on Machine Learning and Cybernetics, 2019

2018
SPRENO: a BioC module for identifying organism terms in figure captions.
Database, 2018

Adverse Drug Reaction Post Classification with Imbalanced Classification Techniques.
Proceedings of the Conference on Technologies and Applications of Artificial Intelligence, 2018

An Ensemble Neural Network Model for Benefiting Pregnancy Health Stats from Mining Social Media.
Proceedings of the Information Retrieval Technology, 2018

2017
Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategy.
Database, 2017

Using a Recurrent Neural Network Model for Classification of Tweets Conveyed Influenza-related Information.
Proceedings of the International Workshop on Digital Disease Detection using Social Media, 2017

Incorporating Dependency Trees Improve Identification of Pregnant Women on Social Media Platforms.
Proceedings of the International Workshop on Digital Disease Detection using Social Media, 2017

NTTMU System in the 2nd Social Media Mining for Health Applications Shared Task.
Proceedings of the 2nd Social Media Mining for Health Research and Applications Workshop co-located with the American Medical Informatics Association Annual Symposium (AMIA 2017), 2017

2016
Feature Engineering for Recognizing Adverse Drug Reactions from Twitter Posts.
Information, 2016

Overview of the interactive task in BioCreative V.
Database, 2016

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.
Database, 2016

Improving the dictionary lookup approach for disease normalization using enhanced dictionary and query expansion.
Database, 2016

MET network in PubMed: a text-mined network visualization and curation system.
Database, 2016

NTTMUNSW BioC modules for recognizing and normalizing species and gene/protein mentions.
Database, 2016

Combining Multiple Classifiers Using Global Ranking for ReachOut.com Post Triage.
Proceedings of the 3rd Workshop on Computational Linguistics and Clinical Psychology: From Linguistic Signal to Clinical Reality, 2016

Statistical Principle-Based Approach for Detecting miRNA-Target Gene Interaction Articles.
Proceedings of the 16th IEEE International Conference on Bioinformatics and Bioengineering, 2016

2015
The CHEMDNER corpus of chemicals and drugs and its annotation principles.
J. Cheminformatics, 2015

Enhancing of chemical compound and drug name recognition using representative tag scheme and fine-grained tokenization.
J. Cheminformatics, 2015

Coronary artery disease risk assessment from unstructured electronic health records using text mining.
Journal of Biomedical Informatics, 2015

A context-aware approach for progression tracking of medical concepts in electronic medical records.
Journal of Biomedical Informatics, 2015

Utilizing different word representation methods for twitter data in adverse drug reactions extraction.
Proceedings of the Conference on Technologies and Applications of Artificial Intelligence, 2015

TMUNSW: Identification of Disorders and Normalization to SNOMED-CT Terminology in Unstructured Clinical Notes.
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015

A preliminary study on automatic identification of patient smoking status in unstructured electronic health records.
Proceedings of the Workshop on Biomedical Natural Language Processing, BioNLP@IJCNLP 2015, 2015

2014
Joint Learning of Entity Linking Constraints Using a Markov-Logic Network.
IJCLCLP, 2014

Overview of the gene ontology task at BioCreative IV.
Database, 2014

LiverCancerMarkerRIF: a liver cancer biomarker interactive curation system combining text mining and expert annotations.
Database, 2014

BioC interoperability track overview.
Database, 2014

HTNSystem: Hypertension Information Extraction System for Unstructured Clinical Notes.
Proceedings of the Technologies and Applications of Artificial Intelligence, 2014

Section Heading Recognition in Electronic Health Records Using Conditional Random Fields.
Proceedings of the Technologies and Applications of Artificial Intelligence, 2014

TMUNSW: Disorder Concept Recognition and Normalization in Clinical Notes for SemEval-2014 Task 7.
Proceedings of the 8th International Workshop on Semantic Evaluation, 2014

2013
TEMPTING system: A hybrid method of rule and machine learning for temporal relation extraction in patient discharge summaries.
Journal of Biomedical Informatics, 2013

T-HOD: a literature-based candidate gene database for hypertension, obesity and diabetes.
Database, 2013

2012
Coreference resolution of medical concepts in discharge summaries by exploiting contextual information.
JAMIA, 2012

2011
The gene normalization task in BioCreative III.
BMC Bioinformatics, 2011

MeInfoText 2.0: gene methylation and cancer relation extraction from biomedical literature.
BMC Bioinformatics, 2011

Integration of gene normalization stages and co-reference resolution using a Markov logic network.
Bioinformatics, 2011

Entity Disambiguation Using a Markov-Logic Network.
Proceedings of the Fifth International Joint Conference on Natural Language Processing, 2011

Enhancing Search Results with Semantic Annotation Using Augmented Browsing.
Proceedings of the IJCAI 2011, 2011

2010
Multistage Gene Normalization and SVM-Based Ranking for Protein Interactor Extraction in Full-Text Articles.
IEEE/ACM Trans. Comput. Biology Bioinform., 2010

Global Ranking via Data Fusion.
Proceedings of the COLING 2010, 2010

2009
New Challenges for Biological Text-Mining in the Next Decade.
J. Comput. Sci. Technol., 2009

Using conditional random fields for result identification in biomedical abstracts.
Integrated Computer-Aided Engineering, 2009

A supervised learning approach to biological question answering.
Integrated Computer-Aided Engineering, 2009

HypertenGene: extracting key hypertension genes from biomedical literature with position and automatically-generated template features.
BMC Bioinformatics, 2009

PubMed-EX: a web browser extension to enhance PubMed search with text mining features.
Bioinformatics, 2009

Using Contextual Information to Clarify Gene Normalization Ambiguity.
Proceedings of the IEEE International Conference on Information Reuse and Integration, 2009

2008
BIOSMILE web search: a web application for annotating biomedical entities and relations.
Nucleic Acids Research, 2008

Exploiting likely-positive and unlabeled data to improve the identification of protein-protein interaction articles.
BMC Bioinformatics, 2008

Semi-automatic conversion of BioProp semantic annotation to PASBio annotation.
BMC Bioinformatics, 2008

A Survey of State of the Art Biomedical Text Mining Techniques for Semantic Analysis.
Proceedings of the IEEE International Conference on Sensor Networks, 2008

Result identification for biomedical abstracts using Conditional Random Fields.
Proceedings of the IEEE International Conference on Information Reuse and Integration, 2008

Biological question answering with syntactic and semantic feature matching and an improved mean reciprocal ranking measurement.
Proceedings of the IEEE International Conference on Information Reuse and Integration, 2008

2007
BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features.
BMC Bioinformatics, 2007

Protein-Protein Interaction Abstract Identification with Contextual Bag of Words.
Proceedings of the Short Paper Proceedings of the 2nd International Symposium on Languages in Biology and Medicine (LBM 2007), 2007

BESearch: A Supervised Learning Approach to Search for Molecular Event Participants.
Proceedings of the IEEE International Conference on Information Reuse and Integration, 2007

Exploiting unlabeled internal data in conditional random fields to reduce word segmentation errors for Chinese texts.
Proceedings of the INTERSPEECH 2007, 2007

2006
NERBio: using selected word conjunctions, term normalization, and global patterns to improve biomedical named entity recognition.
BMC Bioinformatics, 2006

Chinese word segmentation with minimal linguistic knowledge: An improved conditional random fields coupled with character clustering and automatically discovered template matching.
Proceedings of the 2006 IEEE International Conference on Information Reuse and Integration, 2006

On Closed Task of Chinese Word Segmentation: An Improved CRF Model Coupled with Character Clustering and Automatically Generated Template Matching.
Proceedings of the Fifth Workshop on Chinese Language Processing, 2006


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