Alba Cristina Magalhaes Alves de Melo
Orcid: 0000-0001-5191-5209
According to our database1,
Alba Cristina Magalhaes Alves de Melo
authored at least 123 papers
between 1997 and 2023.
Collaborative distances:
Collaborative distances:
Timeline
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Online presence:
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on zbmath.org
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on orcid.org
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on cic.unb.br
On csauthors.net:
Bibliography
2023
IEEE Trans. Cloud Comput., 2023
Optimizing computational costs of Spark for SARS-CoV-2 sequences comparisons on a commercial cloud.
Concurr. Comput. Pract. Exp., 2023
Concurr. Comput. Pract. Exp., 2023
2022
Efficient microscopy image analysis on CPU-GPU systems with cost-aware irregular data partitioning.
J. Parallel Distributed Comput., 2022
2021
Parallel Fine-Grained Comparison of Long DNA Sequences in Homogeneous and Heterogeneous GPU Platforms With Pruning.
IEEE Trans. Parallel Distributed Syst., 2021
A CPU-FPGA heterogeneous approach for biological sequence comparison using high-level synthesis.
Concurr. Comput. Pract. Exp., 2021
Comput. Methods Programs Biomed., 2021
CellHeap: A Workflow for Optimizing COVID-19 Single-Cell RNA-Seq Data Processing in the Santos Dumont Supercomputer.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2021
A Fault Tolerant and Deadline Constrained Sequence Alignment Application on Cloud-Based Spot GPU Instances.
Proceedings of the Euro-Par 2021: Parallel Processing, 2021
Comparing SARS-CoV-2 Sequences using a Commercial Cloud with a Spot Instance Based Dynamic Scheduler.
Proceedings of the 21st IEEE/ACM International Symposium on Cluster, 2021
2020
Inf. Syst., 2020
Using GPU to accelerate the pairwise structural RNA alignment with base pair probabilities.
Concurr. Comput. Pract. Exp., 2020
Optimizing parameter sensitivity analysis of large-scale microscopy image analysis workflows with multilevel computation reuse.
Concurr. Comput. Pract. Exp., 2020
MASA-StarPU: Parallel Sequence Comparison with Multiple Scheduling Policies and Pruning.
Proceedings of the 32nd IEEE International Symposium on Computer Architecture and High Performance Computing, 2020
Proceedings of the 28th Euromicro International Conference on Parallel, 2020
2019
J. Parallel Distributed Comput., 2019
J. Digit. Imaging, 2019
J. Comput. Biol., 2019
Future Gener. Comput. Syst., 2019
Concurr. Comput. Pract. Exp., 2019
Concurr. Comput. Pract. Exp., 2019
Sensitivity analysis in digital pathology: Handling large number of parameters with compute expensive workflows.
Comput. Biol. Medicine, 2019
Proceedings of the IEEE International Parallel and Distributed Processing Symposium Workshops, 2019
Proceedings of the IEEE International Parallel and Distributed Processing Symposium Workshops, 2019
Proceedings of the 12th IEEE International Conference on Cloud Computing, 2019
2018
PA-Star: A disk-assisted parallel A-Star strategy with locality-sensitive hash for multiple sequence alignment.
J. Parallel Distributed Comput., 2018
CoRR, 2018
Cooperative and out-of-core execution of the irregular wavefront propagation pattern on hybrid machines with Intel® Xeon Phi™.
Concurr. Comput. Pract. Exp., 2018
Formalization of Block Pruning: Reducing the Number of Cells Computed in Exact Biological Sequence Comparison Algorithms.
Comput. J., 2018
BMC Bioinform., 2018
2017
Dohko: an autonomic system for provision, configuration, and management of inter-cloud environments based on a software product line engineering method.
Clust. Comput., 2017
Algorithm sensitivity analysis and parameter tuning for tissue image segmentation pipelines.
Bioinform., 2017
Proceedings of the 25th Euromicro International Conference on Parallel, 2017
Proceedings of the Bioinformatics and Biomedical Engineering, 2017
Parallel and Efficient Sensitivity Analysis of Microscopy Image Segmentation Workflows in Hybrid Systems.
Proceedings of the 2017 IEEE International Conference on Cluster Computing, 2017
Parallel Biological Sequence Comparison in Linear Space with Multiple Adjustable Bands.
Proceedings of the Algorithms for Computational Biology, 2017
2016
CUDAlign 4.0: Incremental Speculative Traceback for Exact Chromosome-Wide Alignment in GPU Clusters.
IEEE Trans. Parallel Distributed Syst., 2016
ACM Trans. Parallel Comput., 2016
Parallel Optimal Pairwise Biological Sequence Comparison: Algorithms, Platforms, and Classification.
ACM Comput. Surv., 2016
Efficient Methods and Parallel Execution for Algorithm Sensitivity Analysis with Parameter Tuning on Microscopy Imaging Datasets.
CoRR, 2016
Concurr. Comput. Pract. Exp., 2016
Bioinform., 2016
Autonomic Provisioning, Configuration, and Management of Inter-cloud Environments Based on a Software Product Line Engineering Method.
Proceedings of the 2016 International Conference on Cloud and Autonomic Computing, 2016
2015
Proceedings of the 27th International Symposium on Computer Architecture and High Performance Computing, 2015
Proceedings of the 22nd IEEE International Conference on High Performance Computing, 2015
Proceedings of the Ninth International Conference on Complex, 2015
Automating Resource Selection and Configuration in Inter-clouds through a Software Product Line Method.
Proceedings of the 8th IEEE International Conference on Cloud Computing, 2015
2014
J. Zhejiang Univ. Sci. C, 2014
A Framework for Adaptive Fault-Tolerant Execution of Workflows in the Grid: Empirical and Theoretical Analysis.
J. Grid Comput., 2014
An agent-based solution for dynamic multi-node wavefront balancing in biological sequence comparison.
Expert Syst. Appl., 2014
Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, 2014
Proceedings of the 2014 IEEE International Parallel & Distributed Processing Symposium Workshops, 2014
Proceedings of the International Conference on Computational Science, 2014
Proceedings of the Fourth International Workshop on Cloud Data and Platforms, 2014
Proceedings of the 14th IEEE/ACM International Symposium on Cluster, 2014
2013
Retrieving Smith-Waterman Alignments with Optimizations for Megabase Biological Sequences Using GPU.
IEEE Trans. Parallel Distributed Syst., 2013
Multiple biological sequence alignment in heterogeneous multicore clusters with user-selectable task allocation policies.
J. Supercomput., 2013
Parallel Smith-Waterman Comparison on Multicore and Manycore Computing Platforms with BSP++.
Int. J. Parallel Program., 2013
Proceedings of the Advances in Bioinformatics and Computational Biology, 2013
Proceedings of the Advances in Bioinformatics and Computational Biology, 2013
Proceedings of the 2013 IEEE International Symposium on Parallel & Distributed Processing, 2013
Proceedings of the Euro-Par 2013 Parallel Processing, 2013
2012
Int. J. Reconfigurable Comput., 2012
Exact Parallel Alignment of megabase genomic Sequences with Tunable Work Distribution.
Int. J. Found. Comput. Sci., 2012
An architecture for P2P bag-of-tasks execution with multiple task allocation policies in desktop grids.
Clust. Comput., 2012
Logical Model of Relationship for Online Social Networks and Performance Optimizing of Queries - WISE 2012 Challenge - T1: Performance Track Scalability Winner.
Proceedings of the Web Information Systems Engineering - WISE 2012, 2012
Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, 2012
Proceedings of the Third International Conference on Networking and Computing, 2012
Executing a biological sequence comparison application on a federated cloud environment.
Proceedings of the 19th International Conference on High Performance Computing, 2012
Proceedings of the Cloud Computing - Third International Conference, 2012
2011
Proceedings of the 25th IEEE International Symposium on Parallel and Distributed Processing, 2011
Hybrid MPI/OpenMP Strategy for Biological Multiple Sequence Alignment with DIALIGN-TX in Heterogeneous Multicore Clusters.
Proceedings of the 25th IEEE International Symposium on Parallel and Distributed Processing, 2011
Proceedings of the 12th IEEE/ACM International Conference on Grid Computing, 2011
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011
Proceedings of the 11th IEEE International Conference on Computer and Information Technology, 2011
2010
A Hardware Accelerator for the Fast Retrieval of DIALIGN Biological Sequence Alignments in Linear Space.
IEEE Trans. Computers, 2010
J. Parallel Distributed Comput., 2010
Impact Analysis Model for Brasília Area Control Center using Multi-agent System with Reinforcement Learning.
Proceedings of the 22nd International Conference on Software Engineering & Knowledge Engineering (SEKE'2010), Redwood City, San Francisco Bay, CA, USA, July 1, 2010
Proceedings of the 15th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, 2010
Multiple Biological Sequence Alignment with a Parallel Island Injection Genetic Algorithm.
Proceedings of the 12th IEEE International Conference on High Performance Computing and Communications, 2010
Proceedings of the Design, Automation and Test in Europe, 2010
2009
Proceedings of the NPC 2009, 2009
Exact pairwise alignment of megabase genome biological sequences using a novel z-align parallel strategy.
Proceedings of the 23rd IEEE International Symposium on Parallel and Distributed Processing, 2009
2008
J. Parallel Distributed Comput., 2008
A task allocation framework for biological sequence comparison applications in heterogeneous environments.
Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008
Proceedings of the Euro-Par 2008, 2008
2007
Parallel strategies for the local biological sequence alignment in a cluster of workstations.
J. Parallel Distributed Comput., 2007
An exact parallel algorithm to compare very long biological sequences in clusters of workstations.
Clust. Comput., 2007
Biological Sequence Comparison Application in Heterogeneous Environments with Dynamic Programming Algorithms.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2007
A Four-layered Semantic Grid Architecture.
Proceedings of the Nineteenth International Conference on Software Engineering & Knowledge Engineering (SEKE'2007), 2007
Reconfigurable Architecture for Biological Sequence Comparison in Reduced Memory Space.
Proceedings of the 21th International Parallel and Distributed Processing Symposium (IPDPS 2007), 2007
Proceedings of the High Performance Computing, 2007
Proceedings of the Grid Computing for Bioinformatics and Computational Biology, 2007
2006
Integrating coordinated checkpointing and recovery mechanisms into DSM synchronization barriers.
ACM J. Exp. Algorithmics, 2006
PackageBLAST: an adaptive multi-policy grid service for biological sequence comparison.
Proceedings of the 2006 ACM Symposium on Applied Computing (SAC), 2006
A multiple task allocation framework for biological sequence comparison in a grid environment.
Proceedings of the 20th International Parallel and Distributed Processing Symposium (IPDPS 2006), 2006
Proceedings of the 20th Annual International Symposium on High Performance Computing Systems and Applications (HPCS 2006), 2006
Z-align: An Exact and Parallel Strategy for Local Biological Sequence Alignment in User-Restricted Memory Space.
Proceedings of the 2006 IEEE International Conference on Cluster Computing, 2006
Proceedings of the Sixth IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2006), 2006
2005
Parallel Smith-Waterman Algorithm for Local DNA Comparison in a Cluster of Workstations.
Proceedings of the Experimental and Efficient Algorithms, 4th InternationalWorkshop, 2005
Integrating Coordinated Checkpointing and Recovery Mechanisms into DSM Synchronization Barriers.
Proceedings of the Experimental and Efficient Algorithms, 4th InternationalWorkshop, 2005
Proceedings of the XXV International Conference of the Chilean Computer Science Society, 2005
Parallel Strategies for Local Biological Sequence Alignment in a Cluster of Workstations.
Proceedings of the 19th International Parallel and Distributed Processing Symposium (IPDPS 2005), 2005
Proceedings of the 34th International Conference on Parallel Processing Workshops (ICPP 2005 Workshops), 2005
Method to Balance the Communication Among Multi-agents in Real Time Traffic Synchronization.
Proceedings of the Fuzzy Systems and Knowledge Discovery, Second International Conference, 2005
2004
J. Braz. Comput. Soc., 2004
Parallel Biological Sequence Comparison in Heterogeneous Systems Using CORBA.
Proceedings of the III Brazilian Workshop on Bioinformatics, 2004
Rede BIOFOCO: A distributed computation of Interpro Pfam, PROSITE and ProDom for protein annotation.
Proceedings of the III Brazilian Workshop on Bioinformatics, 2004
Distributed Knowledge Based System Using Grid Computing for Real Time Air Traffic Synchronization - ATFMGC.
Proceedings of the Sixteenth International Conference on Software Engineering & Knowledge Engineering (SEKE'2004), 2004
A Performance Evaluation of a Local DNA Sequence Alignment Algorithm on a Cluster of Workstations.
Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004
Proceedings of the 4th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid 2004), 2004
2003
Computing Binary Space Partition Trees using a Scope Consistent DSM System in a Cluster of Workstations.
Proceedings of the 11th Euromicro Workshop on Parallel, 2003
Proceedings of the Computational Science - ICCS 2003, 2003
Proceedings of the Euro-Par 2003. Parallel Processing, 2003
2002
Proceedings of the Data Mining and Knowledge Discovery: Theory, 2002
Proceedings of the On the Move to Meaningful Internet Systems, 2002 - DOA/CoopIS/ODBASE 2002 Confederated International Conferences DOA, CoopIS and ODBASE 2002 Irvine, California, USA, October 30, 2002
2001
Proceedings of the 30th International Workshops on Parallel Processing (ICPP 2001 Workshops), 2001
Proceedings of the High-Performance Computing and Networking, 9th International Conference, 2001
1999
Proceedings of the 32nd Annual Hawaii International Conference on System Sciences (HICSS-32), 1999
Proceedings of the Parallel Computation, 1999
1997
Multiple Memory Consistency Models on a SVM Parallel Programming Environment.
Proceedings of the On Principles Of Distributed Systems, 1997