Anika Oellrich

According to our database1, Anika Oellrich authored at least 30 papers between 2010 and 2017.

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Bibliography

2017
Automated PDF highlighting to support faster curation of literature for Parkinson's and Alzheimer's disease.
Database J. Biol. Databases Curation, 2017

The psycho-env corpus: research articles annotated for knowledge discovery on correlating mental diseases and environmental factors.
Proceedings of the 2nd International Workshop on Knowledge Discovery in Healthcare Data Co-located with the 26th International Joint Conference on Artificial Intelligence (IJCAI 2017), 2017

2016
Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop.
J. Biomed. Semant., 2016

Reporting phenotypes in mouse models when considering body size as a potential confounder.
J. Biomed. Semant., 2016

The digital revolution in phenotyping.
Briefings Bioinform., 2016

Challenges and opportunities for system biology standards and tools in medical research.
Proceedings of the 7th Workshop on Ontologies and Data in Life Sciences, 2016

Don't Let Notes Be Misunderstood: A Negation Detection Method for Assessing Risk of Suicide in Mental Health Records.
Proceedings of the 3rd Workshop on Computational Linguistics and Clinical Psychology: From Linguistic Signal to Clinical Reality, 2016

The language of mental health problems in social media.
Proceedings of the 3rd Workshop on Computational Linguistics and Clinical Psychology: From Linguistic Signal to Clinical Reality, 2016

Multi-label Annotation in Scientific Articles - The Multi-label Cancer Risk Assessment Corpus.
Proceedings of the Tenth International Conference on Language Resources and Evaluation LREC 2016, 2016

2015
Special issue on bio-ontologies and phenotypes.
J. Biomed. Semant., 2015

Linking gene expression to phenotypes via pathway information.
J. Biomed. Semant., 2015

Concept selection for phenotypes and diseases using learn to rank.
J. Biomed. Semant., 2015

Automatic concept recognition using the Human Phenotype Ontology reference and test suite corpora.
Database J. Biol. Databases Curation, 2015

PhenoMiner: from text to a database of phenotypes associated with OMIM diseases.
Database J. Biol. Databases Curation, 2015

2014
The influence of disease categories on gene candidate predictions from model organism phenotypes.
J. Biomed. Semant., 2014

Using association rule mining to determine promising secondary phenotyping hypotheses.
Bioinform., 2014

Linking tissues to phenotypes using gene expression profiles.
Database J. Biol. Databases Curation, 2014

2013
Automatically transforming pre- to post-composed phenotypes: EQ-lising HPO and MP.
J. Biomed. Semant., 2013

PhenoDigm: analyzing curated annotations to associate animal models with human diseases.
Database J. Biol. Databases Curation, 2013

Using silver and semi-gold standard corpora to compare open named entity recognisers.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
Quantitative comparison of mapping methods between Human and Mammalian Phenotype Ontology.
J. Biomed. Semant., 2012

Linking PharmGKB to Phenotype Studies and Animal Models of Disease for Drug Repurposing.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

A Hybrid Approach to Finding Phenotype Candidates in Genetic Texts.
Proceedings of the COLING 2012, 2012

2011
Ontology design patterns to disambiguate relations between genes and gene products in GENIA.
J. Biomed. Semant., 2011

A common layer of interoperability for biomedical ontologies based on OWL EL.
Bioinform., 2011

Exploring the Generation and Integration of Publishable Scientific Facts Using the Concept of Nano-publications.
Proceedings of the 1st Workshop on Semantic Publishing 2011, 2011

2010
Relations as patterns: bridging the gap between OBO and OWL.
BMC Bioinform., 2010

Interoperability between phenotype and anatomy ontologies.
Bioinform., 2010

Applying ontology design patterns to the implementation of relations in GENIA.
Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, 2010

Relational Patterns in OWL and Their Application to OBO.
Proceedings of the 7th International Workshop on OWL: Experiences and Directions (OWLED 2010), 2010


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