Tim J. P. Hubbard

According to our database1, Tim J. P. Hubbard authored at least 50 papers between 1994 and 2021.

Collaborative distances:

Timeline

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Bibliography

2021
GENCODE 2021.
Nucleic Acids Res., 2021

2019
GENCODE reference annotation for the human and mouse genomes.
Nucleic Acids Res., 2019

2017
Automated PDF highlighting to support faster curation of literature for Parkinson's and Alzheimer's disease.
Database J. Biol. Databases Curation, 2017

2016
Challenges and opportunities for system biology standards and tools in medical research.
Proceedings of the 7th Workshop on Ontologies and Data in Life Sciences, 2016

The language of mental health problems in social media.
Proceedings of the 3rd Workshop on Computational Linguistics and Clinical Psychology: From Linguistic Signal to Clinical Reality, 2016

2015
An interactive genome browser of association results from the UK10K cohorts project.
Bioinform., 2015

2014
Ensembl 2014.
Nucleic Acids Res., 2014

Current status and new features of the Consensus Coding Sequence database.
Nucleic Acids Res., 2014

2013
Ensembl 2013.
Nucleic Acids Res., 2013

2012
Ensembl 2012.
Nucleic Acids Res., 2012

2011
Ensembl 2011.
Nucleic Acids Res., 2011

Dalliance: interactive genome viewing on the web.
Bioinform., 2011

2010
Ensembl's 10th year.
Nucleic Acids Res., 2010

Metamotifs - a generative model for building families of nucleotide position weight matrices.
BMC Bioinform., 2010

iMotifs: an integrated sequence motif visualization and analysis environment.
Bioinform., 2010

2009
Ensembl 2009.
Nucleic Acids Res., 2009

Petabyte-scale innovations at the European Nucleotide Archive.
Nucleic Acids Res., 2009

2008
The vertebrate genome annotation (Vega) database.
Nucleic Acids Res., 2008

Ensembl 2008.
Nucleic Acids Res., 2008

Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database.
Nucleic Acids Res., 2008

Data growth and its impact on the SCOP database: new developments.
Nucleic Acids Res., 2008

Integrating biological data - the Distributed Annotation System.
BMC Bioinform., 2008

NestedMICA as an ab initio protein motif discovery tool.
BMC Bioinform., 2008

The Protein Feature Ontology: a tool for the unification of protein feature annotations.
Bioinform., 2008

2007
Large-Scale Discovery of Promoter Motifs in <i>Drosophila melanogaster</i>.
PLoS Comput. Biol., 2007

Ensembl 2007.
Nucleic Acids Res., 2007

SISYPHUS - structural alignments for proteins with non-trivial relationships.
Nucleic Acids Res., 2007

Integrating sequence and structural biology with DAS.
BMC Bioinform., 2007

2006
Ensembl 2006.
Nucleic Acids Res., 2006

A machine learning strategy to identify candidate binding sites in human protein-coding sequence.
BMC Bioinform., 2006

The Distributed Annotation System for Integration of Biological Data.
Proceedings of the Data Integration in the Life Sciences, Third International Workshop, 2006

2005
Ensembl 2005.
Nucleic Acids Res., 2005

The Vertebrate Genome Annotation (Vega) database.
Nucleic Acids Res., 2005

Adding Some SPICE to DAS.
Proceedings of the ECCB/JBI'05 Proceedings, Fourth European Conference on Computational Biology/Sixth Meeting of the Spanish Bioinformatics Network (Jornadas de BioInformática), Palacio de Congresos, Madrid, Spain, September 28, 2005

2004
Ensembl 2004.
Nucleic Acids Res., 2004

SCOP database in 2004: refinements integrate structure and sequence family data.
Nucleic Acids Res., 2004

What can we learn from noncoding regions of similarity between genomes?
BMC Bioinform., 2004

2003
Ensembl 2002: accommodating comparative genomics.
Nucleic Acids Res., 2003

ddbRNA: detection of conserved secondary structures in multiple alignments.
Bioinform., 2003

2002
The Ensembl genome database project.
Nucleic Acids Res., 2002

SCOP database in 2002: refinements accommodate structural genomics.
Nucleic Acids Res., 2002

MaxBench: evaluation of sequence and structure comparison methods.
Bioinform., 2002

Biological information: making it accessible and integrated (and trying to make sense of it).
Proceedings of the European Conference on Computational Biology (ECCB 2002), 2002

2000
SCOP: a Structural Classification of Proteins database.
Nucleic Acids Res., 2000

A browser for expression data.
Bioinform., 2000

1999
SCOP: a Structural Classification of Proteins database.
Nucleic Acids Res., 1999

1998
SPEM: a parser for EMBL style flat file database entries.
Bioinform., 1998

1997
SCOP: a structural classification of proteins database.
Nucleic Acids Res., 1997

1995
A Specification for Defining and Annotating Regions of Macromolecular Structures.
Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, 1995

1994
Use of beta-strand Interaction Pseudo-Potentials in Protein Structure Prediction and Modeling.
Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994


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