Anatoly A. Sorokin

According to our database, Anatoly A. Sorokin authored at least 25 papers between 1999 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Shapley Value as a Quality Control for Mass Spectra of Human Glioblastoma Tissues.

Denis S. Zavorotnyuk, Anatoly A. Sorokin, Stanislav I. Pekov, Denis S. Bormotov, Vasiliy A. Eliferov, Konstantin V. Bocharov, Eugene N. Nikolaev, Igor A. Popov

Data, January, 2023

Aggregation of Multimodal ICE-MS Data into Joint Classifier Increases Quality of Brain Cancer Tissue Classification.

Anatoly A. Sorokin, Denis S. Bormotov, Denis S. Zavorotnyuk, Vasily A. Eliferov, Konstantin V. Bocharov, Stanislav I. Pekov, Evgeny N. Nikolaev, Igor A. Popov

Data, January, 2023

2021

Comparison of different machine learning methods and dimensionality reduction for classification astrocytoma and glioblastoma tissues by mass spectra.

Evgeny S. Zhvansky, Anatoly A. Sorokin, Denis S. Zavorotnyuk, Vsevolod Shurkhay, Vasiliy A. Eliferov, Denis S. Bormotov, Daniil G. Ivanov, Alexander A. Potapov

F1000Research, 2021

Lipid Profiles of Human Brain Tumors Obtained by High-Resolution Negative Mode Ambient Mass Spectrometry.

Denis S. Zavorotnyuk, Stanislav I. Pekov, Anatoly A. Sorokin, Denis S. Bormotov, Nikita Levin, Evgeny S. Zhvansky, Savva Semenov, Polina Strelnikova, Konstantin V. Bocharov, Alexander Vorobiev, Alexey S. Kononikhin, Vsevolod Shurkhay, Eugene N. Nikolaev, Igor A. Popov

Data, 2021

The software for interactive evaluation of mass spectra stability and reproducibility.

Evgeny S. Zhvansky, Anatoly A. Sorokin, Denis S. Bormotov, Konstantin V. Bocharov, Denis S. Zavorotnyuk, Daniil G. Ivanov, Eugene N. Nikolaev, Igor A. Popov

Bioinform., 2021

SBGN Bricks Ontology as a tool to describe recurring concepts in molecular networks.

Adrien Rougny, Vasundra Touré, John Albanese, Dagmar Waltemath, Denis Shirshov, Anatoly A. Sorokin, Gary D. Bader, Michael L. Blinov, Alexander Mazein

Briefings Bioinform., 2021

2020

DNA sequence, physics, and promoter function: Analysis of high-throughput data On T7 promoter variants activity.

Mikhail A. Orlov, Anatoly A. Sorokin

J. Bioinform. Comput. Biol., 2020

Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities.

Igor Goryanin, Anatoly A. Sorokin, Olga Vasieva

Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2020), 2020

2019

Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0.

Adrien Rougny, Vasundra Touré, Stuart L. Moodie, Irina Balaur, Tobias Czauderna, Hanna Borlinghaus, Ugur Dogrusoz, Alexander Mazein, Andreas Dräger, Michael L. Blinov, Alice Villéger, Robin Haw, Emek Demir, Huaiyu Mi, Anatoly A. Sorokin, Falk Schreiber, Augustin Luna

J. Integr. Bioinform., 2019

2018

Bacterial promoter prediction: Selection of dynamic and static physical properties of DNA for reliable sequence classification.

Artem Ryasik, Mikhail A. Orlov, Evgenia Zykova, Timofei Ermak, Anatoly A. Sorokin

J. Bioinform. Comput. Biol., 2018

ASAR: visual analysis of metagenomes in R.

Askarbek N. Orakov, Nazgul Sakenova, Anatoly A. Sorokin, Igor Goryanin

Bioinform., 2018

ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes.

Askarbek N. Orakov, Nazgul Sakenova, Igor Goryanin, Anatoly A. Sorokin

Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2018), 2018

2016

Structural distinctions of fast and slow bacterial luciferases revealed by phylogenetic analysis.

Anna A. Deeva, Evgenia A. Temlyakova, Anatoly A. Sorokin, Elena V. Nemtseva, Valentina A. Kratasyuk

Bioinform., 2016

2015

Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2.

Anatoly A. Sorokin, Nicolas Le Novère, Augustin Luna, Tobias Czauderna, Emek Demir, Robin Haw, Huaiyu Mi, Stuart L. Moodie, Falk Schreiber, Alice Villéger

J. Integr. Bioinform., 2015

Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2 .

Huaiyu Mi, Falk Schreiber, Stuart L. Moodie, Tobias Czauderna, Emek Demir, Robin Haw, Augustin Luna, Nicolas Le Novère, Anatoly A. Sorokin, Alice Villéger

J. Integr. Bioinform., 2015

2014

RKappa: Statistical Sampling Suite for Kappa Models.

Anatoly A. Sorokin, Oksana Sorokina, J. Douglas Armstrong

Proceedings of the Hybrid Systems Biology, 2014

2013

A simulator for spatially extended kappa models.

Oksana Sorokina, Anatoly A. Sorokin, J. Douglas Armstrong, Vincent Danos

Bioinform., 2013

SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology.

Richard R. Adams, Allan Clark, Azusa Yamaguchi, Neil Hanlon, Nikos Tsorman, Shakir Ali, Galina Lebedeva, Alexey N. Goltsov, Anatoly A. Sorokin, Ozgur E. Akman, Carl Troein, Andrew J. Millar, Igor Goryanin, Stephen Gilmore

Bioinform., 2013

2012

Software support for SBGN maps: SBGN-ML and LibSBGN.

Martijn P. van Iersel, Alice Villéger, Tobias Czauderna, Sarah E. Boyd, Frank T. Bergmann, Augustin Luna, Emek Demir, Anatoly A. Sorokin, Ugur Dogrusöz, Yukiko Matsuoka, Akira Funahashi, Mirit I. Aladjem, Huaiyu Mi, Stuart L. Moodie, Hiroaki Kitano, Nicolas Le Novère, Falk Schreiber

Bioinform., 2012

2011

Microarray data can predict diurnal changes of starch content in the picoalga Ostreococcus.

Oksana Sorokina, Florence Corellou, David Dauvillée, Anatoly A. Sorokin, Igor Goryanin, Steven Ball, François-Yves Bouget, Andrew J. Millar

BMC Syst. Biol., 2011

2009

A fragile metabolic network adapted for cooperation in the symbiotic bacterium Buchnera aphidicola.

Gavin H. Thomas, Jeremy Zucker, Sandy J. Macdonald, Anatoly A. Sorokin, Igor Goryanin, Angela E. Douglas

BMC Syst. Biol., 2009

2006

A Graphical Notation to describe the Logical Interactions of Biological Pathways.

Stuart L. Moodie, Anatoly A. Sorokin, Igor Goryanin, Peter Ghazal

J. Integr. Bioinform., 2006

Electrostatic Properties of Promoter Recognized by <i>e. Coli</i> Rna Polymerase Esigma⁷⁰.

Anatoly A. Sorokin, Alexander A. Osypov, Timur R. Dzhelyadin, Petr M. Beskaravainy, Svetlana G. Kamzolova

J. Bioinform. Comput. Biol., 2006

The Pathway Editor: A tool for managing complex biological networks.

Anatoly A. Sorokin, Kirill Paliy, Alexey Selkov, Oleg V. Demin, Serge Dronov, Peter Ghazal, Igor Goryanin

IBM J. Res. Dev., 2006

1999

Automated analysis of interatomic contacts in proteins.

Vladimir Sobolev, Anatoly A. Sorokin, Jaime Prilusky, Enrique E. Abola, Marvin Edelman

Bioinform., 1999