Melanie I. Stefan

According to our database, Melanie I. Stefan authored at least 16 papers between 2007 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Ten simple rules for failing successfully in academia.

Stefan Gaillard, Tara van Viegen, Michele Veldsman, Melanie I. Stefan, Veronika Cheplygina

PLoS Comput. Biol., December, 2022

Validation Through Collaboration: Encouraging Team Efforts to Ensure Internal and External Validity of Computational Models of Biochemical Pathways.

Richard Fitzpatrick, Melanie I. Stefan

Neuroinformatics, 2022

2020

The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE).

Dagmar Waltemath, Martin Golebiewski, Michael L. Blinov, Padraig Gleeson, Henning Hermjakob, Michael Hucka, Esther Thea Inau, Sarah M. Keating, Matthias König, Olga Krebs, Rahuman S. Malik-Sheriff, David P. Nickerson, Ernst Oberortner, Herbert M. Sauro, Falk Schreiber, Lucian P. Smith, Melanie I. Stefan, Ulrike Wittig, Chris J. Myers

J. Integr. Bioinform., 2020

2019

A multi-state model of the CaMKII dodecamer suggests a role for calmodulin in maintenance of autophosphorylation.

Matthew C. Pharris, Neal M. Patel, Tyler G. VanDyk, Thomas M. Bartol, Terrence J. Sejnowski, Mary B. Kennedy, Melanie I. Stefan, Tamara Kinzer-Ursem

PLoS Comput. Biol., 2019

2018

FindSim: A Framework for Integrating Neuronal Data and Signaling Models.

Nisha A. Viswan, Gubbi Vani HarshaRani, Melanie I. Stefan, Upinder S. Bhalla

Frontiers Neuroinformatics, 2018

2017

Women are underrepresented in computational biology: An analysis of the scholarly literature in biology, computer science and computational biology.

Kevin S. Bonham, Melanie I. Stefan

PLoS Comput. Biol., 2017

Cooperative binding mitigates the high-dose hook effect.

Ranjita Dutta Roy, Christian Rosenmund, Melanie I. Stefan

BMC Syst. Biol., 2017

2016

The systems biology format converter.

Nicolas Rodriguez, Jean-Baptiste Pettit, Piero Dalle Pezze, Lu Li, Arnaud Henry, Martijn P. van Iersel, Gaël Jalowicki, Martina Kutmon, Kedar Nath Natarajan, David Tolnay, Melanie I. Stefan, Chris T. A. Evelo, Nicolas Le Novère

BMC Bioinform., 2016

2015

The Quantitative Methods Boot Camp: Teaching Quantitative Thinking and Computing Skills to Graduate Students in the Life Sciences.

Melanie I. Stefan, Johanna L. Gutlerner, Richard T. Born, Michael Springer

PLoS Comput. Biol., 2015

2014

Multi-state Modeling of Biomolecules.

Melanie I. Stefan, Thomas M. Bartol, Terrence J. Sejnowski, Mary B. Kennedy

PLoS Comput. Biol., 2014

Ten Simple Rules for Finishing Your PhD.

Jacopo Marino, Melanie I. Stefan, Sarah Blackford

PLoS Comput. Biol., 2014

2013

Cooperative Binding.

Melanie I. Stefan, Nicolas Le Novère

PLoS Comput. Biol., 2013

2011

Ten Simple Rules for Getting Help from Online Scientific Communities.

Giovanni Marco Dall'Olio, Jacopo Marino, Michael Schubert, Kevin L. Keys, Melanie I. Stefan, Colin S. Gillespie, Pierre Poulain, Khader Shameer, Robert Sugar, Brandon M. Invergo, Lars Juhl Jensen, Jaume Bertranpetit, Hafid Laayouni

PLoS Comput. Biol., 2011

2010

BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models.

Chen Li, Marco Donizelli, Nicolas Rodriguez, Harish Dharuri, Lukas Endler, Vijayalakshmi Chelliah, Lu Li, Enuo He, Arnaud Henry, Melanie I. Stefan, Jacky L. Snoep, Michael Hucka, Nicolas Le Novère, Camille Laibe

BMC Syst. Biol., 2010

2009

Computing phenomenologic Adair-Klotz constants from microscopic MWC parameters.

Melanie I. Stefan, Stuart J. Edelstein, Nicolas Le Novère

BMC Syst. Biol., 2009

2007

Molecules for memory: modelling CaMKII.

Melanie I. Stefan, Nicolas Le Novère

BMC Syst. Biol., 2007