David P. Nickerson

According to our database1, David P. Nickerson authored at least 25 papers between 2003 and 2019.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

Homepages:

On csauthors.net:

Bibliography

2019
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019.
J. Integrative Bioinformatics, 2019

Model annotation and discovery with the Physiome Model Repository.
BMC Bioinformatics, 2019

Community-driven roadmap for integrated disease maps.
Briefings in Bioinformatics, 2019

Harmonizing semantic annotations for computational models in biology.
Briefings in Bioinformatics, 2019

2018
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017.
J. Integrative Bioinformatics, 2018

Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3).
J. Integrative Bioinformatics, 2018

2017
SED-ML web tools: generate, modify and export standard-compliant simulation studies.
Bioinformatics, 2017

A brief history of COMBINE.
Proceedings of the 2017 Winter Simulation Conference, 2017

Introducing the Physiome Journal: Improving Reproducibility, Reuse, and Discovery of Computational Models.
Proceedings of the 13th IEEE International Conference on e-Science, 2017

2016
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016.
J. Integrative Bioinformatics, 2016

2015
Specifications of Standards in Systems and Synthetic Biology.
J. Integrative Bioinformatics, 2015

The CellML 1.1 Specification.
J. Integrative Bioinformatics, 2015

Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 2.
J. Integrative Bioinformatics, 2015

2014
Physiome Repository.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project.
BMC Bioinformatics, 2014

2013
Standards and tools supporting collaborative development of the virtual physiological human.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

2011
Minimum Information About a Simulation Experiment (MIASE).
PLoS Computational Biology, 2011

Reproducible computational biology experiments with SED-ML - The Simulation Experiment Description Markup Language.
BMC Systems Biology, 2011

Revision history aware repositories of computational models of biological systems.
BMC Bioinformatics, 2011

The Physiome Model Repository 2.
Bioinformatics, 2011

2010
An overview of the CellML API and its implementation.
BMC Bioinformatics, 2010

2008
Reference descriptions of cellular electrophysiology models.
Bioinformatics, 2008

2006
Computational multiscale modeling in the IUPS Physiome Project: Modeling cardiac electromechanics.
IBM Journal of Research and Development, 2006

2005
Multi-scale and multi-physics visualization.
Proceedings of the 32. International Conference on Computer Graphics and Interactive Techniques, 2005

2003
An Overview of CellML 1.1, a Biological Model Description Language.
Simulation, 2003


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