Raymund Stefancsik

According to our database, Raymund Stefancsik authored at least 13 papers between 2013 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2025

The Cell Ontology in the age of single-cell omics.

Shawn Zheng Kai Tan, Aleix Puig-Barbe, Damien Goutte-Gattat, Caroline Eastwood, Brian D. Aevermann, Alida Avola, James P. Balhoff, Ismail Ugur Bayindir, Jasmine Belfiore, Anita R. Caron, David S. Fischer, Nancy George, Benjamin M. Gyori, Melissa A. Haendel, Charles Tapley Hoyt, Hüseyin Kir, Tiago Lubiana, Nicolas Matentzoglu, James A. Overton, Beverly Peng, Bjoern Peters, Ellen M. Quardokus, Patrick L. Ray, Paola Roncaglia, Andrea D. Rivera, Raymund Stefancsik, Wei Kheng Teh, Sabrina Toro, Nicole A. Vasilevsky, Chuan Xu, Yun Zhang, Richard H. Scheuermann, Christopher J. Mungall, Alexander D. Diehl, David Osumi-Sutherland

CoRR, June, 2025

2024

Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI).

Sabrina Toro, Anna V. Anagnostopoulos, Susan M. Bello, Kai Lewis Blumberg, Rhiannon Cameron, Leigh Carmody, Alexander D. Diehl, Damion M. Dooley, William D. Duncan, Petra Fey, Pascale Gaudet, Nomi L. Harris, Marcin P. Joachimiak, Leila Kiani, Tiago Lubiana, Monica C. Munoz-Torres, Shawn T. O'Neil, David Osumi-Sutherland, Aleix Puig-Barbe, Justin T. Reese, Leonore Reiser, Sofia M. C. Robb, Troy Ruemping, James Seager, Eric Sid, Raymund Stefancsik, Magalie Weber, Valerie Wood, Melissa A. Haendel, Christopher J. Mungall

J. Biomed. Semant., December, 2024

Standardising Biological Trait Representation with the Ontology of Biological Attributes (OBA).

Arwa Ibrahim, Raymund Stefancsik, Vinicius de Souza, Anita R. Caron, Nicolas Matentzoglu, James A. McLaughlin, Zoë May Pendlington

Proceedings of the 15th International Conference on Biological and Biomedical Ontology (ICBO 2024) co-located with 14th International Conference on Formal Ontology in Information Systems (FOIS 2024), Enschede, The Netherlands, July 18, 2024

2023

The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource.

Elliot Sollis, Abayomi Mosaku, Ala Abid, Annalisa Buniello, Maria Cerezo, Laurent Gil, Tudor Groza, Osman Nuri Günes, Peggy Hall, James D. Hayhurst, Arwa Ibrahim, Yue Ji, Sajo John, Elizabeth Lewis, Jacqueline A. L. MacArthur, Aoife McMahon, David Osumi-Sutherland, Kalliope Panoutsopoulou, Zoë May Pendlington, Santhi Ramachandran, Raymund Stefancsik, Jonathan Stewart, Patricia L. Whetzel, Robert J. Wilson, Lucia Hindorff, Fiona Cunningham, Samuel A. Lambert, Michael Inouye, Helen E. Parkinson, Laura W. Harris

Nucleic Acids Res., January, 2023

Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI).

Sabrina Toro, Anna V. Anagnostopoulos, Sue Bello, Kai Lewis Blumberg, Rhiannon Cameron, Leigh Carmody, Alexander D. Diehl, Damion M. Dooley, William D. Duncan, Petra Fey, Pascale Gaudet, Nomi L. Harris, Marcin P. Joachimiak, Leila Kiani, Tiago Lubiana, Monica C. Munoz-Torres, Shawn T. O'Neil, David Osumi-Sutherland, Aleix Puig, Justin P. Reese, Leonore Reiser, Sofia M. C. Robb, Troy Ruemping, James Seager, Eric Sid, Raymund Stefancsik, Magalie Weber, Valerie Wood, Melissa A. Haendel, Christopher J. Mungall

CoRR, 2023

2022

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies.

Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron, William D. Duncan, Joe E. Flack, Melissa A. Haendel, Nomi L. Harris, William R. Hogan, Charles Tapley Hoyt, Rebecca C. Jackson, Hyeongsik Kim, Hüseyin Kir, Martin Larralde, Julie A. McMurry, James A. Overton, Bjoern Peters, Clare Pilgrim, Raymund Stefancsik, Sofia M. C. Robb, Sabrina Toro, Nicole A. Vasilevsky, Ramona L. Walls, Christopher J. Mungall, David Osumi-Sutherland

CoRR, 2022

Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.

Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron, William D. Duncan, Joe E. Flack, Melissa A. Haendel, Nomi L. Harris, William R. Hogan, Charles Tapley Hoyt, Rebecca C. Jackson, Hyeongsik Kim, Hüseyin Kir, Martin Larralde, Julie A. McMurry, James A. Overton, Bjoern Peters, Clare Pilgrim, Raymund Stefancsik, Sofia M. C. Robb, Sabrina Toro, Nicole A. Vasilevsky, Ramona L. Walls, Christopher J. Mungall, David Osumi-Sutherland

Database J. Biol. Databases Curation, 2022

2019

COSMIC: the Catalogue Of Somatic Mutations In Cancer.

John G. Tate, Sally Bamford, Harry Jubb, Zbyslaw Sondka, David Beare, Nidhi Bindal, Harry Boutselakis, Charlotte Cole, Celestino Creatore, Elisabeth Dawson, Peter Fish, Bhavana Harsha, Charlie Hathaway, Steve C. Jupe, Chai Yin Kok, Kate Noble, Laura Ponting, Christopher C. Ramshaw, Claire E. Rye, Helen E. Speedy, Raymund Stefancsik, Sam L. Thompson, Shicai Wang, Sari Ward, Peter J. Campbell, Simon A. Forbes

Nucleic Acids Res., 2019

2017

COSMIC: somatic cancer genetics at high-resolution.

Simon A. Forbes, David Beare, Harry Boutselakis, Sally Bamford, Nidhi Bindal, John G. Tate, Charlotte Cole, Sari Ward, Elisabeth Dawson, Laura Ponting, Raymund Stefancsik, Bhavana Harsha, Chai Yin Kok, Mingming Jia, Harry Jubb, Zbyslaw Sondka, Sam L. Thompson, Tisham De, Peter J. Campbell

Nucleic Acids Res., 2017

2016

Overview of the interactive task in BioCreative V.

Qinghua Wang, Shabbir Syed-Abdul, Lara Almeida, Sophia Ananiadou, Yalbi I. Balderas-Martínez, Riza Batista-Navarro, David Campos, Lucy Chilton, Hui-Jou Chou, Gabriela Contreras, Laurel Cooper, Hong-Jie Dai, Barbra Ferrell, Juliane Fluck, Socorro Gama-Castro, Nancy George, Georgios V. Gkoutos, Afroza Khanam Irin, Lars Juhl Jensen, Silvia Jimenez, Toni Rose Jue, Ingrid M. Keseler, Sumit Madan, Sérgio Matos, Peter McQuilton, Marija Milacic, Matthew E. Mort, Jeyakumar Natarajan, Evangelos Pafilis, Emiliano Pereira, Shruti Rao, Fabio Rinaldi, Karen Rothfels, David Salgado, Raquel M. Silva, Onkar Singh, Raymund Stefancsik, Chu-Hsien Su, Suresh Subramani, Hamsa D. Tadepally, Loukia Tsaprouni, Nicole A. Vasilevsky, Xiaodong Wang, Andrew Chatr-aryamontri, Stanley J. F. Laulederkind, Sherri Matis-Mitchell, Johanna R. McEntyre, Sandra E. Orchard, Sangya Pundir, Raul Rodriguez-Esteban, Kimberly Van Auken, Zhiyong Lu, Mary L. Schaeffer, Cathy H. Wu, Lynette Hirschman, Cecilia N. Arighi

Database J. Biol. Databases Curation, 2016

2014

FlyBase 102 - advanced approaches to interrogating FlyBase.

Susan E. St. Pierre, Laura Ponting, Raymund Stefancsik, Peter McQuilton

Nucleic Acids Res., 2014

tagtog: interactive and text-mining-assisted annotation of gene mentions in PLOS full-text articles.

Juan Miguel Cejuela, Peter McQuilton, Laura Ponting, Steven J. Marygold, Raymund Stefancsik, Gillian H. Millburn, Burkhard Rost

Database J. Biol. Databases Curation, 2014

2013

The Drosophila phenotype ontology.

David Osumi-Sutherland, Steven J. Marygold, Gillian H. Millburn, Peter McQuilton, Laura Ponting, Raymund Stefancsik, Kathleen Falls, Nicholas H. Brown, Georgios V. Gkoutos

J. Biomed. Semant., 2013