Jeyakumar Natarajan

Orcid: 0000-0003-3981-619X

According to our database1, Jeyakumar Natarajan authored at least 26 papers between 2004 and 2023.

Collaborative distances:



In proceedings 
PhD thesis 




DisGeReExT: a knowledge discovery system for exploration of disease-gene associations through large-scale literature-wide analysis study.
Knowl. Inf. Syst., 2023

Literature Based Discovery (LBD): Towards Hypothesis Generation and Knowledge Discovery in Biomedical Text Mining.
CoRR, 2023

Transcriptomic meta-analysis reveals biomarker pairs and key pathways in Tetralogy of Fallot.
J. Bioinform. Comput. Biol., 2022

Multiscale Laplacian graph kernel combined with lexico-syntactic patterns for biomedical event extraction from literature.
Knowl. Inf. Syst., 2021

Integrated regulatory network based on lncRNA-miRNA-mRNA-TF reveals key genes and sub-networks associated with dilated cardiomyopathy.
Comput. Biol. Chem., 2021

Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol.
Proceedings of the Protein-Protein Interaction Networks, Methods and Protocols., 2020

Classifying protein-protein interaction articles from biomedical literature using many relevant features and context-free grammar.
J. King Saud Univ. Comput. Inf. Sci., 2020

Molecular Mechanism of T-2 Toxin-Induced Cerebral Edema by Aquaporin-4 Blocking and Permeation.
J. Chem. Inf. Model., 2019

In Silico Characterization of B Cell and T Cell Epitopes for Subunit Vaccine Design of <i>Salmonella typhi</i> PgtE: A Molecular Dynamics Simulation Approach.
J. Comput. Biol., 2019

Mining protein phosphorylation information from biomedical literature using NLP parsing and Support Vector Machines.
Comput. Methods Programs Biomed., 2018

Text mining and network analysis to find functional associations of genes in high altitude diseases.
Comput. Biol. Chem., 2018

Prediction of microRNAs involved in immune system diseases through network based features.
J. Biomed. Informatics, 2017

BCC-NER: bidirectional, contextual clues named entity tagger for gene/protein mention recognition.
EURASIP J. Bioinform. Syst. Biol., 2017

Stacked ensemble combined with fuzzy matching for biomedical named entity recognition of diseases.
J. Biomed. Informatics, 2016

Overview of the interactive task in BioCreative V.
Database J. Biol. Databases Curation, 2016

HPIminer: A text mining system for building and visualizing human protein interaction networks and pathways.
J. Biomed. Informatics, 2015

ProNormz - An integrated approach for human proteins and protein kinases normalization.
J. Biomed. Informatics, 2014

A hybrid named entity tagger for tagging human proteins/genes.
Int. J. Data Min. Bioinform., 2014

PPInterFinder - a mining tool for extracting causal relations on human proteins from literature.
Database J. Biol. Databases Curation, 2013

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.
Database J. Biol. Databases Curation, 2013

miRNA-mRNA network detects hub mRNAs and cancer specific miRNAs in lung cancer.
Silico Biol., 2012

Information Retrieval and Text Mining Opportunities in Bioinformatics.
Proceedings of the 16th International Conference on Management of Data, 2010

Text mining of full-text journal articles combined with gene expression analysis reveals a relationship between sphingosine-1-phosphate and invasiveness of a glioblastoma cell line.
BMC Bioinform., 2006

GetItFull - A Tool for Downloading and Pre-processing Full-Text Journal Articles.
Proceedings of the Knowledge Discovery in Life Science Literature, 2006

A Grid Infrastructure for Text Mining of Full Text Articles and Creation of a Knowledge Base of Gene Relations.
Proceedings of the Biological and Medical Data Analysis, 6th International Symposium, 2005

Text Mining of Full Text Articles and Creation of a Knowledge Base for Analysis of Microarray Data.
Proceedings of the Knowledge Exploration in Life Science Informatics, 2004