Chih-Hsuan Wei

According to our database1, Chih-Hsuan Wei authored at least 38 papers between 2009 and 2019.

Collaborative distances:



In proceedings 
PhD thesis 




Using deep learning to identify translational research in genomic medicine beyond bench to bedside.
Database, 2019

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
Database, 2019

ezTag: tagging biomedical concepts via interactive learning.
Nucleic Acids Research, 2018

LitVar: a semantic search engine for linking genomic variant data in PubMed and PMC.
Nucleic Acids Research, 2018

tmVar 2.0: integrating genomic variant information from literature with dbSNP and ClinVar for precision medicine.
Bioinformatics, 2018

Assisting document triage for human kinome curation via machine learning.
Database, 2018

Overview of the BioCreative VI text-mining services for Kinome Curation Track.
Database, 2018

On expert curation and scalability: UniProtKB/Swiss-Prot as a case study.
Bioinformatics, 2017

BioCreative VI Precision Medicine Track: creating a training corpus for mining protein-protein interactions affected by mutations.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

Improving chemical disease relation extraction with rich features and weakly labeled data.
J. Cheminformatics, 2016

Beyond accuracy: creating interoperable and scalable text-mining web services.
Bioinformatics, 2016

Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task.
Database, 2016

BioCreative V CDR task corpus: a resource for chemical disease relation extraction.
Database, 2016

Mining chemical patents with an ensemble of open systems.
Database, 2016

Large-scale Semantic Indexing with Biomedical Ontologies.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

BioCconvert: A Conversion Tool Between BioC and PubAnnotation.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

SimConcept: A Hybrid Approach for Simplifying Composite Named Entities in Biomedical Text.
IEEE J. Biomedical and Health Informatics, 2015

tmChem: a high performance approach for chemical named entity recognition and normalization.
J. Cheminformatics, 2015

Gene Name Disambiguation UsingMulti-Scope Species Detection.
IEEE/ACM Trans. Comput. Biology Bioinform., 2014

tmBioC: improving interoperability of text-mining tools with BioC.
Database, 2014

Hybrid curation of gene-mutation relations combining automated extraction and crowdsourcing.
Database, 2014

BC4GO: a full-text corpus for the BioCreative IV GO task.
Database, 2014

NCBI at the 2014 BioASQ Challenge Task: Large-scale Biomedical Semantic Indexing and Question Answering.
Proceedings of the Working Notes for CLEF 2014 Conference, 2014

SimConcept: a hybrid approach for simplifying composite named entities in biomedicine.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

Text mining tools for assisting literature curation.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

Automatic Extraction of Drug Indications from FDA Drug Labels.
Proceedings of the AMIA 2014, 2014

PubTator: a web-based text mining tool for assisting biocuration.
Nucleic Acids Research, 2013

Unsupervised corpus distillation for represented indicator measurement on focus species detection.
IJDMB, 2013

tmVar: a text mining approach for extracting sequence variants in biomedical literature.
Bioinformatics, 2013

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.
Database, 2013

DNorm: A New Method and Online Tool for Disease Name Normalization.
Proceedings of the AMIA 2013, 2013

Accelerating literature curation with text-mining tools: a case study of using PubTator to curate genes in PubMed abstracts.
Database, 2012

Prioritizing PubMed articles for the Comparative Toxicogenomic Database utilizing semantic information.
Database, 2012

Cross-species gene normalization by species inference.
BMC Bioinformatics, 2011

The gene normalization task in BioCreative III.
BMC Bioinformatics, 2011

On Deriving an Equation of the Mutation Rate of the Hepatitis B Virus.
JCIT, 2010

Represented indicator measurement and corpus distillation on focus species detection.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Normalizing Biomedical Name Entities by Similarity-Based Inference Network and De-ambiguity Mining.
Proceedings of the Ninth IEEE International Conference on Bioinformatics and Bioengineering, 2009