Donald C. Comeau

Orcid: 0000-0002-9373-530X

According to our database1, Donald C. Comeau authored at least 45 papers between 2004 and 2023.

Collaborative distances:

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

On csauthors.net:

Bibliography

2023
MedCPT: Contrastive Pre-trained Transformers with large-scale PubMed search logs for zero-shot biomedical information retrieval.
Bioinform., October, 2023

Database resources of the National Center for Biotechnology Information in 2023.
Nucleic Acids Res., January, 2023

BioCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval.
CoRR, 2023

Opportunities and Challenges for ChatGPT and Large Language Models in Biomedicine and Health.
CoRR, 2023

2022
Database resources of the national center for biotechnology information.
Nucleic Acids Res., 2022

Towards a unified search: Improving PubMed retrieval with full text.
J. Biomed. Informatics, 2022

2021
Database resources of the National Center for Biotechnology Information.
Nucleic Acids Res., 2021

Measuring the relative importance of full text sections for information retrieval from scientific literature.
Proceedings of the 20th Workshop on Biomedical Language Processing, 2021

Improving PubMed Retrieval by Integrating Abstract and Full Text Search.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
Database resources of the National Center for Biotechnology Information.
Nucleic Acids Res., 2020

Navigating the landscape of COVID-19 research through literature analysis: A bird's eye view.
CoRR, 2020

2019
LitSense: making sense of biomedical literature at sentence level.
Nucleic Acids Res., 2019

PMC text mining subset in BioC: about three million full-text articles and growing.
Bioinform., 2019

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
Database J. Biol. Databases Curation, 2019

2018
PMC text mining subset in BioC: 2.3 million full text articles and growing.
CoRR, 2018

A Field Sensor: computing the composition and intent of PubMed queries.
Database J. Biol. Databases Curation, 2018

SingleCite: Towards an improved Single Citation Search in PubMed.
Proceedings of the BioNLP 2018 workshop, Melbourne, Australia, July 19, 2018, 2018

MeSH-based dataset for measuring the relevance of text retrieval.
Proceedings of the BioNLP 2018 workshop, Melbourne, Australia, July 19, 2018, 2018

2017
The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactions.
Database J. Biol. Databases Curation, 2017

BioCreative VI Precision Medicine Track: creating a training corpus for mining protein-protein interactions affected by mutations.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

2016
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.
Database J. Biol. Databases Curation, 2016

BioCconvert: A Conversion Tool Between BioC and PubAnnotation.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

PubTermVariants: biomedical term variants and their use for PubMed search.
Proceedings of the 15th Workshop on Biomedical Natural Language Processing, 2016

2015
Optimizing graph-based patterns to extract biomedical events from the literature.
BMC Bioinform., December, 2015

2014
Author name disambiguation for PubMed.
J. Assoc. Inf. Sci. Technol., 2014

BioC implementations in Go, Perl, Python and Ruby.
Database J. Biol. Databases Curation, 2014

Finding abbreviations in biomedical literature: three BioC-compatible modules and four BioC-formatted corpora.
Database J. Biol. Databases Curation, 2014

Natural language processing pipelines to annotate BioC collections with an application to the NCBI disease corpus.
Database J. Biol. Databases Curation, 2014

BioC interoperability track overview.
Database J. Biol. Databases Curation, 2014

2013
BioC: a minimalist approach to interoperability for biomedical text processing.
Database J. Biol. Databases Curation, 2013

BioNLP Shared Task 2013: Supporting Resources.
Proceedings of the BioNLP Shared Task 2013 Workshop, Sofia, 2013

Generalizing an Approximate Subgraph Matching-based System to Extract Events in Molecular Biology and Cancer Genetics.
Proceedings of the BioNLP Shared Task 2013 Workshop, Sofia, 2013

BioC: A Minimalist Approach to Interoperability for Biomedical Text Processing.
Proceedings of the AMIA 2013, 2013

2012
Identifying well-formed biomedical phrases in MEDLINE® text.
J. Biomed. Informatics, 2012

Finding biomedical categories in Medline<sup>®</sup>.
J. Biomed. Semant., 2012

Classifying Gene Sentences in Biomedical Literature by Combining High-Precision Gene Identifiers.
Proceedings of the 2012 Workshop on Biomedical Natural Language Processing, 2012

2011
Machine learning with naturally labeled data for identifying abbreviation definitions.
BMC Bioinform., 2011

Comparison of Two Methods for Finding Biomedical Categories in Medline.
Proceedings of the 10th International Conference on Machine Learning and Applications and Workshops, 2011

Text Mining Techniques for Leveraging Positively Labeled Data.
Proceedings of the 2011 Workshop on Biomedical Natural Language Processing, 2011

2010
Identifying Abbreviation Definitions Machine Learning with Naturally Labeled Data.
Proceedings of the Ninth International Conference on Machine Learning and Applications, 2010

2009
How to interpret PubMed queries and why it matters.
J. Assoc. Inf. Sci. Technol., 2009

2008
Research Paper: Optimal Training Sets for Bayesian Prediction of MeSH<sup>®</sup> Assignment.
J. Am. Medical Informatics Assoc., 2008

Abbreviation definition identification based on automatic precision estimates.
BMC Bioinform., 2008

2006
SemCat: Semantically Categorized Entities for Genomics.
Proceedings of the AMIA 2006, 2006

2004
Non-word identification or spell checking without a dictionary.
J. Assoc. Inf. Sci. Technol., 2004


  Loading...