Matthew J. Clarkson
Orcid: 0000-0002-5565-1252
According to our database1,
Matthew J. Clarkson
authored at least 110 papers
between 1999 and 2024.
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Bibliography
2024
Long-Term Dependency for 3D Reconstruction of Freehand Ultrasound Without External Tracker.
IEEE Trans. Biomed. Eng., March, 2024
Weakly supervised localisation of prostate cancer using reinforcement learning for bi-parametric MR images.
CoRR, 2024
CoRR, 2024
An objective comparison of methods for augmented reality in laparoscopic liver resection by preoperative-to-intraoperative image fusion.
CoRR, 2024
2023
The value of Augmented Reality in surgery - A usability study on laparoscopic liver surgery.
Medical Image Anal., December, 2023
Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration.
Medical Image Anal., December, 2023
Comput. Graph. Forum, September, 2023
CAL-Tutor: A HoloLens 2 Application for Training in Obstetric Sonography and User Motion Data Recording.
J. Imaging, January, 2023
Long-term Dependency for 3D Reconstruction of Freehand Ultrasound Without External Tracker.
CoRR, 2023
Latent Disentanglement in Mesh Variational Autoencoders Improves the Diagnosis of Craniofacial Syndromes and Aids Surgical Planning.
CoRR, 2023
A Recycling Training Strategy for Medical Image Segmentation with Diffusion Denoising Models.
CoRR, 2023
Enhanced Surgeons: Understanding the Design of Augmented Reality Instructions for Keyhole Surgery.
Proceedings of the IEEE Conference on Virtual Reality and 3D User Interfaces Abstracts and Workshops, 2023
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023
Boundary-RL: Reinforcement Learning for Weakly-Supervised Prostate Segmentation in TRUS Images.
Proceedings of the Machine Learning in Medical Imaging - 14th International Workshop, 2023
The effect of luminance on depth perception in augmented reality guided laparoscopic surgery.
Proceedings of the Medical Imaging 2023: Image-Guided Procedures, 2023
Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion.
Proceedings of the Medical Imaging with Deep Learning, 2023
Privileged Anatomical and Protocol Discrimination in Trackerless 3D Ultrasound Reconstruction.
Proceedings of the Simplifying Medical Ultrasound - 4th International Workshop, 2023
Importance of Aligning Training Strategy with Evaluation for Diffusion Models in 3D Multiclass Segmentation.
Proceedings of the Deep Generative Models - Third MICCAI Workshop, 2023
Procedurally Generated Colonoscopy and Laparoscopy Data for Improved Model Training Performance.
Proceedings of the Data Engineering in Medical Imaging - First MICCAI Workshop, 2023
Trackerless Freehand Ultrasound with Sequence Modelling and Auxiliary Transformation Over Past and Future Frames.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023
2022
Software tool for visualization of a probabilistic map of the epileptogenic zone from seizure semiologies.
Frontiers Neuroinformatics, August, 2022
IEEE Trans. Medical Imaging, 2022
Voice-Assisted Image Labeling for Endoscopic Ultrasound Classification Using Neural Networks.
IEEE Trans. Medical Imaging, 2022
IEEE Trans. Medical Imaging, 2022
Utility of optical see-through head mounted displays in augmented reality-assisted surgery: A systematic review.
Medical Image Anal., 2022
Automatic Classification of Simulated Breast Tomosynthesis Whole Images for the Presence of Microcalcification Clusters Using Deep CNNs.
J. Imaging, 2022
Int. J. Comput. Assist. Radiol. Surg., 2022
Int. J. Comput. Assist. Radiol. Surg., 2022
Int. J. Comput. Assist. Radiol. Surg., 2022
Proceedings of the Medical Imaging 2022: Image-Guided Procedures, 2022
Proceedings of the Cancer Prevention Through Early Detection, 2022
Towards Multi-modal Self-supervised Video and Ultrasound Pose Estimation for Laparoscopic Liver Surgery.
Proceedings of the Simplifying Medical Ultrasound - Third International Workshop, 2022
3D Shape Variational Autoencoder Latent Disentanglement via Mini-Batch Feature Swapping for Bodies and Faces.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2022
Detection of Microcalcifications in Digital Breast Tomosynthesis using Faster R-CNN and 3D Volume Rendering.
Proceedings of the 15th International Joint Conference on Biomedical Engineering Systems and Technologies, 2022
2021
Zero-Shot Super-Resolution With a Physically-Motivated Downsampling Kernel for Endomicroscopy.
IEEE Trans. Medical Imaging, 2021
Registration of Untracked 2D Laparoscopic Ultrasound to CT Images of the Liver Using Multi-Labelled Content-Based Image Retrieval.
IEEE Trans. Medical Imaging, 2021
Machine Learning for Localizing Epileptogenic-Zone in the Temporal Lobe: Quantifying the Value of Multimodal Clinical-Semiology and Imaging Concordance.
Frontiers Digit. Health, 2021
Voice-assisted Image Labelling for Endoscopic Ultrasound Classification using Neural Networks.
CoRR, 2021
Integrated multi-modality image-guided navigation for neurosurgery: open-source software platform using state-of-the-art clinical hardware.
Int. J. Comput. Assist. Radiol. Surg., 2021
Vessel segmentation for automatic registration of untracked laparoscopic ultrasound to CT of the liver.
Int. J. Comput. Assist. Radiol. Surg., 2021
Are fiducial registration error and target registration error correlated? SciKit-SurgeryFRED for teaching and research.
Proceedings of the Medical Imaging 2021: Image-Guided Procedures, 2021
Proceedings of the Simplifying Medical Ultrasound - Second International Workshop, 2021
Morphological Change Forecasting For Prostate Glands Using Feature-Based Registration And Kernel Density Extrapolation.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021
2020
An Enhanced Visualization of DBT Imaging Using Blind Deconvolution and Total Variation Minimization Regularization.
IEEE Trans. Medical Imaging, 2020
J. Open Source Softw., 2020
J. Imaging, 2020
J. Biomed. Informatics, 2020
CoRR, 2020
Impact of total variation minimization in volume rendering visualization of breast tomosynthesis data.
Comput. Methods Programs Biomed., 2020
Int. J. Comput. Assist. Radiol. Surg., 2020
Learning from irregularly sampled data for endomicroscopy super-resolution: a comparative study of sparse and dense approaches.
Int. J. Comput. Assist. Radiol. Surg., 2020
Proceedings of the Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, and Graphs in Biomedical Image Analysis, 2020
Multi-Task Recurrent Neural Network for Surgical Gesture Recognition and Progress Prediction.
Proceedings of the 2020 IEEE International Conference on Robotics and Automation, 2020
2019
Registration of Untracked 2D Laparoscopic Ultrasound Liver Images to CT Using Content-Based Retrieval and Kinematic Priors.
Proceedings of the Smart Ultrasound Imaging and Perinatal, Preterm and Paediatric Image Analysis, 2019
Generating Large Labeled Data Sets for Laparoscopic Image Processing Tasks Using Unpaired Image-to-Image Translation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019
More Unlabelled Data or Label More Data? A Study on Semi-supervised Laparoscopic Image Segmentation.
Proceedings of the Domain Adaptation and Representation Transfer and Medical Image Learning with Less Labels and Imperfect Data, 2019
2018
IEEE Trans. Medical Imaging, 2018
In vivo estimation of target registration errors during augmented reality laparoscopic surgery.
Int. J. Comput. Assist. Radiol. Surg., 2018
Int. J. Comput. Assist. Radiol. Surg., 2018
A pre-operative planning framework for global registration of laparoscopic ultrasound to CT images.
Int. J. Comput. Assist. Radiol. Surg., 2018
Automatic segmentation of stereoelectroencephalography (SEEG) electrodes post-implantation considering bending.
Int. J. Comput. Assist. Radiol. Surg., 2018
Determination of optimal ultrasound planes for the initialisation of image registration during endoscopic ultrasound-guided procedures.
Int. J. Comput. Assist. Radiol. Surg., 2018
Augmented reality needle ablation guidance tool for irreversible electroporation in the pancreas.
Proceedings of the Medical Imaging 2018: Image-Guided Procedures, 2018
Proceedings of the 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2018
2017
Development and Phantom Validation of a 3-D-Ultrasound-Guided System for Targeting MRI-Visible Lesions During Transrectal Prostate Biopsy.
IEEE Trans. Biomed. Eng., 2017
Intelligent viewpoint selection for efficient CT to video registration in laparoscopic liver surgery.
Int. J. Comput. Assist. Radiol. Surg., 2017
Proceedings of the Medical Imaging 2017: Image-Guided Procedures, 2017
Proceedings of the Medical Imaging 2017: Image-Guided Procedures, 2017
Deep residual networks for automatic segmentation of laparoscopic videos of the liver.
Proceedings of the Medical Imaging 2017: Image-Guided Procedures, 2017
Towards Image-Guided Pancreas and Biliary Endoscopy: Automatic Multi-organ Segmentation on Abdominal CT with Dense Dilated Networks.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017
2016
Int. J. Comput. Assist. Radiol. Surg., 2016
Proceedings of the Computer-Assisted and Robotic Endoscopy - Third International Workshop, 2016
2015
Int. J. Comput. Assist. Radiol. Surg., 2015
Detection and modelling of contacts in explicit finite-element simulation of soft tissue biomechanics.
Int. J. Comput. Assist. Radiol. Surg., 2015
NiftySim: A GPU-based nonlinear finite element package for simulation of soft tissue biomechanics.
Int. J. Comput. Assist. Radiol. Surg., 2015
The NifTK software platform for image-guided interventions: platform overview and NiftyLink messaging.
Int. J. Comput. Assist. Radiol. Surg., 2015
Proceedings of the Medical Imaging 2015: Image-Guided Procedures, 2015
Database-Based Estimation of Liver Deformation under Pneumoperitoneum for Surgical Image-Guidance and Simulation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015
2014
A Computer Assisted Planning System for the Placement of sEEG Electrodes in the Treatment of Epilepsy.
Proceedings of the Information Processing in Computer-Assisted Interventions, 2014
Fast Semi-dense Surface Reconstruction from Stereoscopic Video in Laparoscopic Surgery.
Proceedings of the Information Processing in Computer-Assisted Interventions, 2014
Proceedings of the Information Processing in Computer-Assisted Interventions, 2014
2012
An event-based model for disease progression and its application in familial Alzheimer's disease and Huntington's disease.
NeuroImage, 2012
Proceedings of the Medical Imaging 2012: Image-Guided Procedures, 2012
Cortical Folding Analysis on Patients with Alzheimer's Disease and Mild Cognitive Impairment.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012
2011
NeuroImage, 2011
Topologically correct cortical segmentation using Khalimsky's cubic complex framework.
Proceedings of the Medical Imaging 2011: Image Processing, 2011
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011
Cross-sectional analysis using voxel or surface based cortical thickness methods: A comparison study.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011
An Event-Based Disease Progression Model and Its Application to Familial Alzheimer's Disease.
Proceedings of the Information Processing in Medical Imaging, 2011
On the Extraction of Topologically Correct Thickness Measurements Using Khalimsky's Cubic Complex.
Proceedings of the Information Processing in Medical Imaging, 2011
2010
NeuroImage, 2010
Robust atrophy rate measurement in Alzheimer's disease using multi-site serial MRI: Tissue-specific intensity normalization and parameter selection.
NeuroImage, 2010
Automated cross-sectional and longitudinal hippocampal volume measurement in mild cognitive impairment and Alzheimer's disease.
NeuroImage, 2010
NeuroImage, 2010
Increasing Power to Predict Mild Cognitive Impairment Conversion to Alzheimer's Disease Using Hippocampal Atrophy Rate and Statistical Shape Models.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010
Proceedings of the Digital Mammography, 2010
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010
2009
NeuroImage, 2009
Improved Maximum a Posteriori Cortical Segmentation by Iterative Relaxation of Priors.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009
2001
Using Photo-Consistency to Register 2D Optical Images of the Human Face to a 3D Surface Model.
IEEE Trans. Pattern Anal. Mach. Intell., 2001
2000
Presence Teleoperators Virtual Environ., 2000
Proceedings of the Medical Imaging 2000: Image Processing, 2000
Proceedings of the Medical Imaging 2000: Image Processing, 2000
Volume and Shape Preservation of Enhancing Lesions when Applying Non-rigid Registration to a Time Series of Contrast Enhancing MR Breast Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000
1999
Proceedings of the Medical Imaging 1999: Image Processing, 1999
Registration of Video Images to Tomographic Images by Optimising Mutual Information Using Texture Mapping.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999