Yonghui Wu

According to our database1, Yonghui Wu authored at least 101 papers between 2000 and 2018.

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Bibliography

2018
A study of generalizability of recurrent neural network-based predictive models for heart failure onset risk using a large and heterogeneous EHR data set.
Journal of Biomedical Informatics, 2018

CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines.
JAMIA, 2018

PIE: A prior knowledge guided integrated likelihood estimation method for bias reduction in association studies using electronic health records data.
JAMIA, 2018

Extraction of BI-RADS findings from breast ultrasound reports in Chinese using deep learning approaches.
I. J. Medical Informatics, 2018

Hierarchical Generative Modeling for Controllable Speech Synthesis.
CoRR, 2018

Training Deeper Neural Machine Translation Models with Transparent Attention.
CoRR, 2018

A Comparison of Techniques for Language Model Integration in Encoder-Decoder Speech Recognition.
CoRR, 2018

Transfer Learning from Speaker Verification to Multispeaker Text-To-Speech Synthesis.
CoRR, 2018

The Best of Both Worlds: Combining Recent Advances in Neural Machine Translation.
CoRR, 2018

Event-Triggered Consensus of General Linear Multi-agent System with Time Delay.
Proceedings of the Advances in Neural Networks - ISNN 2018, 2018

Compression of End-to-End Models.
Proceedings of the Interspeech 2018, 2018


Assessing Mental Health Signals Among Sexual and Gender Minorities using Twitter Data.
Proceedings of the IEEE International Conference on Healthcare Informatics Workshops, 2018

Natural TTS Synthesis by Conditioning Wavenet on MEL Spectrogram Predictions.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018

No Need for a Lexicon? Evaluating the Value of the Pronunciation Lexica in End-to-End Models.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018

Improving the Performance of Online Neural Transducer Models.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018

Minimum Word Error Rate Training for Attention-Based Sequence-to-Sequence Models.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018

An Analysis of Incorporating an External Language Model into a Sequence-to-Sequence Model.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018

State-of-the-Art Speech Recognition with Sequence-to-Sequence Models.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018

CaLcs: Continuously Approximating Longest Common Subsequence for Sequence Level Optimization.
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018

Training Deeper Neural Machine Translation Models with Transparent Attention.
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018

The Best of Both Worlds: Combining Recent Advances in Neural Machine Translation.
Proceedings of the 56th Annual Meeting of the Association for Computational Linguistics, 2018

2017
Google's Multilingual Neural Machine Translation System: Enabling Zero-Shot Translation.
TACL, 2017

A long journey to short abbreviations: developing an open-source framework for clinical abbreviation recognition and disambiguation (CARD).
JAMIA, 2017

Natural TTS Synthesis by Conditioning WaveNet on Mel Spectrogram Predictions.
CoRR, 2017

An analysis of incorporating an external language model into a sequence-to-sequence model.
CoRR, 2017

No Need for a Lexicon? Evaluating the Value of the Pronunciation Lexica in End-to-End Models.
CoRR, 2017

Minimum Word Error Rate Training for Attention-based Sequence-to-Sequence Models.
CoRR, 2017

Improving the Performance of Online Neural Transducer Models.
CoRR, 2017

State-of-the-art Speech Recognition With Sequence-to-Sequence Models.
CoRR, 2017

Multi-Dialect Speech Recognition With A Single Sequence-To-Sequence Model.
CoRR, 2017

Speech recognition for medical conversations.
CoRR, 2017

Sequence-to-Sequence Models Can Directly Transcribe Foreign Speech.
CoRR, 2017

Tacotron: A Fully End-to-End Text-To-Speech Synthesis Model.
CoRR, 2017

Comparing Cancer Information Needs for Consumers in the US and China.
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017

Sequence-to-Sequence Models Can Directly Translate Foreign Speech.
Proceedings of the Interspeech 2017, 2017


A comparative study of different methods for automatic identification of clopidogrel-induced bleedings in electronic health records.
Proceedings of the Summit on Clinical Research Informatics, 2017

Evaluating Word Embeddings from Multiple Domains for Symptom Recognition in Psychiatric Notes.
Proceedings of the AMIA 2017, 2017

Detecting Body Location Modifiers of Disorders in Clinical Texts via Sequence Labeling.
Proceedings of the AMIA 2017, 2017

Detecting Contradictory and Consistent Citations in Biomedical Literature.
Proceedings of the AMIA 2017, 2017

CLAMP - A User-Centric Clinical Natural Language Processing Toolkit.
Proceedings of the AMIA 2017, 2017

Clinical Named Entity Recognition Using Deep Learning Models.
Proceedings of the AMIA 2017, 2017

2016
Extracting genetic alteration information for personalized cancer therapy from ClinicalTrials.gov.
JAMIA, 2016

Google's Neural Machine Translation System: Bridging the Gap between Human and Machine Translation.
CoRR, 2016

Reward Augmented Maximum Likelihood for Neural Structured Prediction.
CoRR, 2016

Exploring the Limits of Language Modeling.
CoRR, 2016

Google's Multilingual Neural Machine Translation System: Enabling Zero-Shot Translation.
CoRR, 2016

Chemical named entity recognition in patents by domain knowledge and unsupervised feature learning.
Database, 2016

CD-REST: a system for extracting chemical-induced disease relation in literature.
Database, 2016

UTHealth at SemEval-2016 Task 12: an End-to-End System for Temporal Information Extraction from Clinical Notes.
Proceedings of the 10th International Workshop on Semantic Evaluation, 2016

Reward Augmented Maximum Likelihood for Neural Structured Prediction.
Proceedings of the Advances in Neural Information Processing Systems 29: Annual Conference on Neural Information Processing Systems 2016, 2016

What Can Neural Networks Learn from Unlabeled Clinical Narratives?
Proceedings of the AMIA 2016, 2016

An Empirical Study for Impacts of Measurement Errors on EHR based Association Studies.
Proceedings of the AMIA 2016, 2016

2015
Scattering Mechanism Extraction by a Modified Cloude-Pottier Decomposition for Dual Polarization SAR.
Remote Sensing, 2015

Deciphering Signaling Pathway Networks to Understand the Molecular Mechanisms of Metformin Action.
PLoS Computational Biology, 2015

A comparison of conditional random fields and structured support vector machines for chemical entity recognition in biomedical literature.
J. Cheminformatics, 2015

UTH-CCB: The Participation of the SemEval 2015 Challenge - Task 14.
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015

Named Entity Recognition in Chinese Clinical Text Using Deep Neural Network.
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015

Clinical Abbreviation Disambiguation Using Neural Word Embeddings.
Proceedings of the Workshop on Biomedical Natural Language Processing, BioNLP@IJCNLP 2015, 2015

A Study of Neural Word Embeddings for Named Entity Recognition in Clinical Text.
Proceedings of the AMIA 2015, 2015

Recognizing Disjoint Clinical Concepts in Clinical Text Using Machine Learning-based Methods.
Proceedings of the AMIA 2015, 2015

Clinical Language Annotation, Modeling, and Processing Toolkit (CLAMP) - a user-centric NLP system.
Proceedings of the AMIA 2015, 2015

Citation Sentiment Analysis in Clinical Trial Papers.
Proceedings of the AMIA 2015, 2015

2014
UTH_CCB: A report for SemEval 2014 - Task 7 Analysis of Clinical Text.
Proceedings of the 8th International Workshop on Semantic Evaluation, 2014

Domain Adaptation for Semantic Role Labeling of Clinical Text.
Proceedings of the AMIA 2014, 2014

Development of a Unified Computable Problem-Medication Knowledge base.
Proceedings of the AMIA 2014, 2014

2013
Combinatorial Pooling Enables Selective Sequencing of the Barley Gene Space.
PLoS Computational Biology, 2013

Recognizing clinical entities in hospital discharge summaries using Structural Support Vector Machines with word representation features.
BMC Med. Inf. & Decision Making, 2013

A hybrid system for temporal information extraction from clinical text.
JAMIA, 2013

Analyzing Differences between Chinese and English Clinical Text: A Cross-Institution Comparison of Discharge Summaries in Two Languages.
Proceedings of the MEDINFO 2013, 2013

Clinical Acronym/Abbreviation Normalization using a Hybrid Approach.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

Recognizing and Encoding Discorder Concepts in Clinical Text using Machine Learning and Vector Space Model.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

A prototype application for real-time recognition and disambiguation of clinical abbreviations.
Proceedings of the Proceeding of the 7rd International Workshop on Data and Text Mining in Bioinformatics, 2013

Building a Large Clinical Abbreviation Sense Inventory from Discharge Summaries.
Proceedings of the AMIA 2013, 2013

2012
A new clustering method for detecting rare senses of abbreviations in clinical notes.
Journal of Biomedical Informatics, 2012

Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs.
JAMIA, 2012

DTome: a web-based tool for drug-target interactome construction.
BMC Bioinformatics, 2012

Ranking Gene-Drug Relationships in Biomedical Literature Using Latent Dirichlet Allocation.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

Detecting Adverse Drug Reactions Using Inpatient Medication Orders and Laboratory Tests Data.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

A comparative study of current clinical natural language processing systems on handling abbreviations in discharge summaries.
Proceedings of the AMIA 2012, 2012

Clinical Entity Recognition Using Structural Support Vector Machines.
Proceedings of the AMIA 2012, 2012

MedEx-UIMA - An Open-Source System for Medication Information Extraction from Clinical Text.
Proceedings of the AMIA 2012, 2012

2011
Accurate Construction of Consensus Genetic Maps via Integer Linear Programming.
IEEE/ACM Trans. Comput. Biology Bioinform., 2011

Barcoding-free BAC Pooling Enables Combinatorial Selective Sequencing of the Barley Gene Space
CoRR, 2011

2010
On-line Hot Topic Recommendation Using Tolerance Rough Set Based Topic Clustering.
JCP, 2010

Efficient Genome-Wide TagSNP Selection Across Populations via the Linkage Disequilibrium Criterion.
Journal of Computational Biology, 2010

Topic Detection by Topic Model Induced Distance Using Biased Initiation.
Proceedings of the Advances in Computer Science and Information Technology, 2010

Topic based automatic news recommendation using topic model and affinity propagation.
Proceedings of the International Conference on Machine Learning and Cybernetics, 2010

2009
STRank: A SiteRank Algorithm Using Semantic Relevance and Time Frequency.
Proceedings of the IEEE International Conference on Systems, 2009

2008
Region-Based Classification of Polarimetric SAR Images Using Wishart MRF.
IEEE Geosci. Remote Sensing Lett., 2008

Deconvoluting BAC-Gene Relationships Using a Physical Map.
J. Bioinformatics and Computational Biology, 2008

A Linear-Time Algorithm for Predicting Functional Annotations from PPI Networks.
J. Bioinformatics and Computational Biology, 2008

Genre identification of Chinese finance text using machine learning method.
Proceedings of the IEEE International Conference on Systems, 2008

2007
Efficient and Accurate Construction of Genetic Linkage Maps from Noisy and Missing Genotyping Data.
Proceedings of the Algorithms in Bioinformatics, 7th International Workshop, 2007

Clock-frequency assignment for multiple clock domain systems-on-a-chip.
Proceedings of the 2007 Design, Automation and Test in Europe Conference and Exposition, 2007

Two-level microprocessor-accelerator partitioning.
Proceedings of the 2007 Design, Automation and Test in Europe Conference and Exposition, 2007

2006
Error-Resilient LZW Data Compression.
Proceedings of the 2006 Data Compression Conference (DCC 2006), 2006

2005
Effective statistical features for coding and non-coding DNA sequence classification for yeast, C. elegans and human.
IJBRA, 2005

2004
Selection of Statistical Features Based on Mutual Information for Classification of Human Coding and Non-coding DNA Sequences.
Proceedings of the 17th International Conference on Pattern Recognition, 2004

2000
Implementation and Proof for Normalization Design of Object-Oriented Data Schemes.
Proceedings of the TOOLS Asia 2000: 36th International Conference on Technology of Object-Oriented Languages and Systems, Xi'an, China, 30 October, 2000


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